##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064202_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1538641 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.289490530929566 32.0 32.0 32.0 32.0 32.0 2 31.37835726462508 32.0 32.0 32.0 32.0 32.0 3 31.455816529001893 32.0 32.0 32.0 32.0 32.0 4 31.5465680428378 32.0 32.0 32.0 32.0 32.0 5 31.494748937536436 32.0 32.0 32.0 32.0 32.0 6 35.066691970381655 36.0 36.0 36.0 36.0 36.0 7 35.0891052558719 36.0 36.0 36.0 36.0 36.0 8 35.03517064734399 36.0 36.0 36.0 36.0 36.0 9 35.13520177871251 36.0 36.0 36.0 36.0 36.0 10 34.992737747141796 36.0 36.0 36.0 36.0 36.0 11 35.14450414359165 36.0 36.0 36.0 36.0 36.0 12 35.05177686022925 36.0 36.0 36.0 36.0 36.0 13 35.09284686941268 36.0 36.0 36.0 36.0 36.0 14 35.038223341247246 36.0 36.0 36.0 36.0 36.0 15 35.014104654692034 36.0 36.0 36.0 36.0 36.0 16 35.02402119792726 36.0 36.0 36.0 36.0 36.0 17 34.987992650657304 36.0 36.0 36.0 36.0 36.0 18 34.98182811974983 36.0 36.0 36.0 36.0 36.0 19 34.9800070321797 36.0 36.0 36.0 36.0 36.0 20 34.97047069459347 36.0 36.0 36.0 36.0 36.0 21 34.96884523420343 36.0 36.0 36.0 36.0 36.0 22 34.95490111078543 36.0 36.0 36.0 36.0 36.0 23 34.90785114916345 36.0 36.0 36.0 32.0 36.0 24 34.87360534393663 36.0 36.0 36.0 32.0 36.0 25 34.852168894498455 36.0 36.0 36.0 32.0 36.0 26 34.78811496638917 36.0 36.0 36.0 32.0 36.0 27 34.78327108142835 36.0 36.0 36.0 32.0 36.0 28 34.75806637155776 36.0 36.0 36.0 32.0 36.0 29 34.738874760259215 36.0 36.0 36.0 32.0 36.0 30 34.71739086635544 36.0 36.0 36.0 32.0 36.0 31 34.709080285784665 36.0 36.0 36.0 32.0 36.0 32 34.6707295593969 36.0 36.0 36.0 32.0 36.0 33 34.6464100462681 36.0 36.0 36.0 32.0 36.0 34 34.631633369967396 36.0 36.0 36.0 32.0 36.0 35 34.597033356059015 36.0 36.0 36.0 32.0 36.0 36 34.57103768845364 36.0 36.0 36.0 32.0 36.0 37 34.55912197842122 36.0 36.0 36.0 32.0 36.0 38 34.5240052747847 36.0 36.0 36.0 32.0 36.0 39 34.51357269174551 36.0 36.0 36.0 32.0 36.0 40 34.50119683538915 36.0 36.0 36.0 32.0 36.0 41 34.48225414505398 36.0 36.0 36.0 32.0 36.0 42 34.42380711290028 36.0 36.0 36.0 32.0 36.0 43 34.41079043129619 36.0 36.0 36.0 32.0 36.0 44 34.35845918573598 36.0 36.0 36.0 32.0 36.0 45 34.31585015607929 36.0 36.0 36.0 32.0 36.0 46 34.305544958180626 36.0 36.0 36.0 32.0 36.0 47 34.269477415459484 36.0 36.0 36.0 32.0 36.0 48 34.21707207854204 36.0 36.0 36.0 32.0 36.0 49 34.199403239612096 36.0 36.0 36.0 32.0 36.0 50 33.60309909849016 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 0.0 17 1.0 18 0.0 19 5.0 20 17.0 21 47.0 22 136.0 23 514.0 24 1243.0 25 3017.0 26 5962.0 27 10990.0 28 18001.0 29 27496.0 30 40099.0 31 56003.0 32 80928.0 33 129670.0 34 265408.0 35 899103.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.800503343490334 17.798106222115916 11.699941241927265 26.701449192466487 2 15.95155183103974 20.518719851504645 36.81525301013757 26.714475307318047 3 18.110013096023422 24.44692860879936 28.878388961644575 28.564669333532645 4 12.379755901474093 16.051177630129445 35.9323584903821 35.636707978014364 5 14.21130725100917 37.018966737530064 33.509181154018385 15.26054485744238 6 34.175852815377745 35.7377526502318 16.69358439504003 13.392810139350425 7 29.957689907970675 30.509605885717257 21.087778817657153 18.444925388654916 8 28.049576249155102 33.06302968855613 19.44255966307908 19.444834399209693 9 27.656457571290787 13.80008683060493 18.18158775220521 40.36186784589908 10 15.473805850154617 27.077860376725727 32.35321644116244 25.095117331957212 11 37.233831673535285 20.859381753118498 22.619506434574408 19.287280138771813 12 24.60060533938716 23.527905469826944 29.128302183550286 22.743187007235605 13 29.821471397012804 19.558140245269666 25.06556144317716 25.554826914540374 14 23.49179629996718 19.239130788003653 25.581310707217764 31.68776220481141 15 25.14480922619357 27.010560414305175 22.42677644783228 25.41785391166897 16 25.531952230075554 25.533837029815583 23.89198147696807 25.04222926314079 17 23.96309470500266 25.770533867224387 25.33664448042136 24.92972694735159 18 24.638559972235168 24.968722317219722 26.138003960648287 24.254713749896826 19 25.57674309780065 24.818541049238288 25.390344720012482 24.21437113294858 20 25.95060648384952 24.213143830554984 25.11407927737984 24.722170408215657 21 26.506248046165414 24.283507328870087 24.63784599526465 24.572398629699848 22 25.730142028117058 24.269370528109583 25.027508076943324 24.972979366830035 23 24.712942869342942 24.098240578800244 25.425069428602438 25.763747123254372 24 24.793193451862557 24.795273216017303 25.399574688230352 25.01195864388978 25 25.01429863876959 24.326794089202707 25.558361843952454 25.10054542807525 26 24.850363813033574 24.979510127943897 25.571555312905208 24.598570746117325 27 25.20719197113644 24.822413845772868 24.924588037170086 25.045806145920608 28 24.62106120411576 24.72797845796072 25.564597844886137 25.086362493037377 29 24.708778027860337 24.781051382325394 25.355793534784475 25.15437705502979 30 24.687521732602708 24.907073828129317 25.581718810830978 24.823685628437 31 25.122227060895792 24.662177533099776 24.964674072003795 25.250921334000637 32 24.907318100398026 24.8119064393772 24.811971433696694 25.46880402652808 33 24.555694211545713 24.661571059028457 25.29670215393415 25.486032575491684 34 25.21553643142513 24.6335149483005 25.359043235974454 24.791905384299913 35 25.525609061768 24.53984021796495 25.364488143736235 24.57006257653081 36 24.83602780068936 25.052144166840534 24.994231480452356 25.117596552017744 37 25.358656069091783 24.880881273840807 24.933721827308233 24.826740829759174 38 24.787199746251623 24.791749537871166 25.308540868828207 25.112509847049004 39 25.261573378985997 24.602976522416213 24.96649494921921 25.16895514937858 40 25.42224608203341 24.85192871260359 25.223366178847627 24.50245902651537 41 24.716510842684396 24.981557849856525 25.431838787985146 24.870092519473936 42 25.502937389632596 25.142222433090627 25.033358009269403 24.32148216800738 43 24.862994823960047 24.50761327624351 25.351611955586407 25.27777994421004 44 24.710081676928006 24.89901684818178 25.034462633146653 25.35643884174356 45 24.648322137182312 25.029116925252694 25.1496142007404 25.172946736824592 46 24.6363483334839 24.86427852328274 25.18319880880966 25.316174334423696 47 24.828319067210014 24.869135128460105 25.340989594504133 24.96155620982575 48 25.236268910774484 25.256481999626935 24.723792365431848 24.78345672416673 49 24.709531877889326 25.168769501838316 24.897295463452394 25.224403156819964 50 24.754000977496776 25.33659945509754 24.89328126949794 25.01611829790774 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 121.0 1 90.0 2 59.0 3 171.0 4 283.0 5 309.5 6 336.0 7 304.0 8 272.0 9 400.5 10 529.0 11 807.5 12 1086.0 13 1810.0 14 2534.0 15 3336.0 16 4138.0 17 4408.5 18 4679.0 19 4701.5 20 4724.0 21 5260.5 22 5797.0 23 6737.5 24 7678.0 25 8634.5 26 9591.0 27 11685.5 28 13780.0 29 16008.5 30 18237.0 31 21092.0 32 23947.0 33 27914.0 34 31881.0 35 36303.5 36 40726.0 37 46972.5 38 53219.0 39 59042.5 40 64866.0 41 70619.0 42 76372.0 43 79655.5 44 82939.0 45 90953.0 46 98967.0 47 105580.5 48 112194.0 49 116156.0 50 120118.0 51 119589.0 52 119060.0 53 118003.0 54 116946.0 55 115138.5 56 113331.0 57 109937.0 58 106543.0 59 97187.5 60 87832.0 61 77556.5 62 67281.0 63 58101.5 64 48922.0 65 41547.0 66 34172.0 67 28463.5 68 22755.0 69 19794.0 70 16833.0 71 13130.5 72 9428.0 73 7942.5 74 6457.0 75 5083.0 76 3709.0 77 3145.0 78 2581.0 79 2086.0 80 1591.0 81 1266.0 82 941.0 83 794.0 84 647.0 85 457.0 86 267.0 87 182.0 88 97.0 89 82.0 90 67.0 91 52.5 92 38.0 93 31.5 94 25.0 95 26.5 96 28.0 97 18.0 98 8.0 99 8.5 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008384022003833253 2 4.5494693044056413E-4 3 3.899545118061978E-4 4 0.0 5 0.0 6 1.2998483726873262E-4 7 6.499241863436631E-5 8 6.499241863436631E-5 9 8.44901442246762E-4 10 9.748862795154946E-4 11 0.0 12 0.0 13 5.199393490749305E-4 14 3.899545118061978E-4 15 0.00422450721123381 16 0.001039878698149861 17 0.0 18 2.5996967453746525E-4 19 6.499241863436631E-5 20 0.0011698635354185935 21 0.0 22 1.2998483726873262E-4 23 6.49924186343663E-4 24 3.249620931718315E-4 25 0.0021447498149340877 26 0.0049394238162118395 27 0.0059793025143617 28 0.004419484467136909 29 0.0024697119081059198 30 0.0035095906062557803 31 0.0072141584684146595 32 0.0029246588385464837 33 0.003964537536696344 34 0.0024697119081059198 35 0.0029246588385464837 36 0.007669105398855224 37 0.003249620931718315 38 0.007084173631145926 39 0.004354492048502542 40 0.0015598180472247913 41 0.00298965125718085 42 0.0019497725590309893 43 8.44901442246762E-4 44 0.0011698635354185935 45 0.0011048711167842271 46 7.799090236123956E-4 47 0.0020147649776653554 48 0.0022097422335684543 49 2.5996967453746525E-4 50 0.0011048711167842271 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1538641.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.877843581542656 #Duplication Level Percentage of deduplicated Percentage of total 1 77.74600534453666 46.552631471099446 2 13.371703332616445 16.013375211384 3 4.094682290999323 7.355422372097105 4 1.665111133075014 3.988130558886037 5 0.8798662466924361 2.6342246746064357 6 0.5218010549014142 1.8746593167642496 7 0.36014670191822024 1.5095365518707362 8 0.2340946770482288 1.1213667564452472 9 0.18079501662365924 0.9743054153142484 >10 0.8472454199744123 8.765510248619382 >50 0.04952470423173369 2.0893991134720746 >100 0.04497534245064495 5.384529102737692 >500 0.0036110338580861716 1.4576566117745486 >1k 4.3770107370741477E-4 0.279252594928895 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.949772559030989E-4 2 0.0 0.0 0.0 0.0 1.949772559030989E-4 3 0.0 0.0 0.0 0.0 1.949772559030989E-4 4 0.0 0.0 0.0 0.0 1.949772559030989E-4 5 0.0 0.0 0.0 0.0 1.949772559030989E-4 6 0.0 0.0 0.0 0.0 1.949772559030989E-4 7 0.0 0.0 0.0 0.0 1.949772559030989E-4 8 0.0 0.0 0.0 0.0 1.949772559030989E-4 9 0.0 0.0 0.0 6.49924186343663E-5 1.949772559030989E-4 10 0.0 0.0 0.0 6.49924186343663E-5 1.949772559030989E-4 11 0.0 0.0 0.0 6.49924186343663E-5 1.949772559030989E-4 12 0.0 0.0 0.0 6.49924186343663E-5 3.249620931718315E-4 13 0.0 0.0 0.0 6.49924186343663E-5 3.899545118061978E-4 14 0.0 0.0 0.0 6.49924186343663E-5 3.899545118061978E-4 15 0.0 0.0 0.0 6.49924186343663E-5 4.5494693044056413E-4 16 0.0 0.0 0.0 6.49924186343663E-5 4.5494693044056413E-4 17 0.0 0.0 0.0 1.299848372687326E-4 4.5494693044056413E-4 18 6.49924186343663E-5 0.0 0.0 1.299848372687326E-4 5.199393490749304E-4 19 6.49924186343663E-5 0.0 0.0 1.949772559030989E-4 5.199393490749304E-4 20 6.49924186343663E-5 0.0 0.0 1.949772559030989E-4 5.849317677092968E-4 21 6.49924186343663E-5 0.0 0.0 3.899545118061978E-4 5.849317677092968E-4 22 1.299848372687326E-4 0.0 0.0 6.49924186343663E-4 7.149166049780293E-4 23 1.299848372687326E-4 0.0 0.0 0.0014298332099560585 7.149166049780293E-4 24 1.299848372687326E-4 0.0 0.0 0.002144749814934088 7.149166049780293E-4 25 1.299848372687326E-4 0.0 0.0 0.002534704326740286 7.149166049780293E-4 26 1.299848372687326E-4 0.0 0.0 0.0029246588385464837 7.799090236123956E-4 27 1.299848372687326E-4 0.0 0.0 0.003899545118061978 7.799090236123956E-4 28 1.299848372687326E-4 0.0 0.0 0.007604112980220857 7.799090236123956E-4 29 2.599696745374652E-4 0.0 0.0 0.015858150146785377 7.799090236123956E-4 30 2.599696745374652E-4 0.0 0.0 0.030871398851323992 7.799090236123956E-4 31 2.599696745374652E-4 0.0 0.0 0.06057293416722939 8.449014422467619E-4 32 2.599696745374652E-4 0.0 0.0 0.09462896153163733 8.449014422467619E-4 33 3.249620931718315E-4 0.0 0.0 0.12485043619661766 8.449014422467619E-4 34 3.249620931718315E-4 0.0 0.0 0.15936141049146618 8.449014422467619E-4 35 3.249620931718315E-4 0.0 0.0 0.20082657358019187 8.449014422467619E-4 36 3.249620931718315E-4 0.0 0.0 0.2591897655138528 8.449014422467619E-4 37 3.249620931718315E-4 0.0 0.0 0.34725449276341913 8.449014422467619E-4 38 3.249620931718315E-4 0.0 0.0 0.46820538384197485 9.748862795154945E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAACGG 45 0.0013994164 24.441357 3 CTAGATA 295 0.0 20.87872 3 ATACCGT 280 0.0 20.425991 6 GTATCAA 2595 0.0 19.836933 1 TCGCACG 330 0.0 19.332775 22 TACCGTC 300 0.0 19.06426 7 ACCGTCG 290 0.0 18.963123 8 CCGATCG 315 0.0 18.854761 18 TAGGACG 190 1.8189894E-12 18.523975 4 CGTCGTA 310 0.0 18.451681 10 GATCGCA 335 0.0 18.38753 20 ATCGCAC 335 0.0 18.38753 21 TCTAGAT 365 0.0 18.079908 2 ATAGCGT 235 0.0 17.784988 6 TAGATAA 350 0.0 17.597778 4 GCCGATC 370 0.0 17.241066 17 CCGTCGT 325 0.0 16.922588 9 CGTATAT 225 1.8189894E-12 16.622282 10 CGATCGC 360 0.0 16.498451 19 CGCAATA 325 0.0 16.249384 36 >>END_MODULE