##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064201_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1180684 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.184864874936903 32.0 32.0 32.0 32.0 32.0 2 31.245912538833423 32.0 32.0 32.0 32.0 32.0 3 31.38532579420065 32.0 32.0 32.0 32.0 32.0 4 31.488582889240472 32.0 32.0 32.0 32.0 32.0 5 31.41376524116529 32.0 32.0 32.0 32.0 32.0 6 34.97584874530357 36.0 36.0 36.0 36.0 36.0 7 35.00771163156272 36.0 36.0 36.0 36.0 36.0 8 34.94888640821761 36.0 36.0 36.0 36.0 36.0 9 35.08437905485295 36.0 36.0 36.0 36.0 36.0 10 34.915665834380746 36.0 36.0 36.0 32.0 36.0 11 35.08923471479244 36.0 36.0 36.0 36.0 36.0 12 34.9842582774053 36.0 36.0 36.0 36.0 36.0 13 35.0372419716029 36.0 36.0 36.0 36.0 36.0 14 34.9741725982566 36.0 36.0 36.0 36.0 36.0 15 34.93932500143984 36.0 36.0 36.0 36.0 36.0 16 34.9619347767904 36.0 36.0 36.0 36.0 36.0 17 34.93415172899777 36.0 36.0 36.0 36.0 36.0 18 34.924874903022314 36.0 36.0 36.0 36.0 36.0 19 34.92530939692585 36.0 36.0 36.0 36.0 36.0 20 34.904741658225234 36.0 36.0 36.0 32.0 36.0 21 34.89802775340396 36.0 36.0 36.0 32.0 36.0 22 34.88463043456166 36.0 36.0 36.0 32.0 36.0 23 34.83830305145153 36.0 36.0 36.0 32.0 36.0 24 34.82290519732629 36.0 36.0 36.0 32.0 36.0 25 34.79926635746737 36.0 36.0 36.0 32.0 36.0 26 34.7472456643776 36.0 36.0 36.0 32.0 36.0 27 34.739213879412276 36.0 36.0 36.0 32.0 36.0 28 34.71172472905536 36.0 36.0 36.0 32.0 36.0 29 34.68412208516419 36.0 36.0 36.0 32.0 36.0 30 34.6555081630648 36.0 36.0 36.0 32.0 36.0 31 34.63557564936935 36.0 36.0 36.0 32.0 36.0 32 34.59602823448103 36.0 36.0 36.0 32.0 36.0 33 34.56631494963936 36.0 36.0 36.0 32.0 36.0 34 34.550019310840156 36.0 36.0 36.0 32.0 36.0 35 34.50178964058122 36.0 36.0 36.0 32.0 36.0 36 34.46394716960677 36.0 36.0 36.0 32.0 36.0 37 34.44693330306839 36.0 36.0 36.0 32.0 36.0 38 34.388014913389185 36.0 36.0 36.0 32.0 36.0 39 34.371695559523125 36.0 36.0 36.0 32.0 36.0 40 34.36112795633717 36.0 36.0 36.0 32.0 36.0 41 34.334985482991215 36.0 36.0 36.0 32.0 36.0 42 34.26106816049002 36.0 36.0 36.0 32.0 36.0 43 34.250351491169525 36.0 36.0 36.0 32.0 36.0 44 34.17292349180644 36.0 36.0 36.0 32.0 36.0 45 34.12133305778684 36.0 36.0 36.0 32.0 36.0 46 34.06535957123159 36.0 36.0 36.0 32.0 36.0 47 34.03296902473482 36.0 36.0 36.0 32.0 36.0 48 33.95612712630983 36.0 36.0 36.0 32.0 36.0 49 33.9238890338143 36.0 36.0 36.0 32.0 36.0 50 33.30996947532108 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 1.0 18 0.0 19 2.0 20 9.0 21 20.0 22 87.0 23 309.0 24 879.0 25 2155.0 26 4465.0 27 8314.0 28 14187.0 29 22396.0 30 33600.0 31 48159.0 32 70055.0 33 113896.0 34 228940.0 35 633209.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.50529994629749 18.975959233527984 12.168700416236792 25.350040403937733 2 14.479029034115934 21.562658806789308 39.68797642036792 24.270335738726835 3 18.11979696463312 26.217665906370986 29.573695181001476 26.088841947994418 4 11.01886702962012 16.945262237821463 38.53800000677573 33.49787072578268 5 12.399338010847949 39.32220644982061 34.445457040156384 13.832998499175053 6 31.72810291001303 38.27542047731735 17.789040571466323 12.207436041203303 7 28.031486859724414 31.952437699196146 21.738265055057116 18.277810386022328 8 26.73407956743718 35.26735350017447 19.846038398081113 18.152528534307233 9 27.163852450130094 13.821789624891586 19.201861312879444 39.812496612098876 10 14.171796496244523 29.103920127113618 33.86153356212881 22.86274981451304 11 36.2971802785504 21.715971419956567 23.711594296187634 18.2752540053054 12 23.49798421248772 25.119422705559508 31.296032794660704 20.08656028729207 13 29.335323148798274 21.061694160732934 26.165282858422994 23.437699832045798 14 22.057421049867788 21.08001985293246 27.780215163778223 29.082343933421527 15 23.75398412533044 29.540674711571775 24.00690144101885 22.698439722078938 16 23.361825533551176 27.241389240383036 26.629535333207983 22.76724989285781 17 21.716818386630123 27.280203678545657 27.353974475812326 23.649003459011894 18 22.236046623900425 26.950948688978066 29.095810726342908 21.717193960778598 19 23.918209983721272 25.82126262617707 27.75201112577307 22.50851626432858 20 24.293435037694476 26.116287519787377 27.39436780762224 22.195909634895912 21 25.447537190306633 25.289323815686497 26.37174722449021 22.891391769516652 22 23.781993242871263 26.427250759944066 27.291414516562078 22.499341480622594 23 23.194229054107275 26.194890541242156 27.388277702632312 23.222602702018253 24 23.05738407488591 26.566814265725736 27.765280229292372 22.61052143009598 25 23.342932402788247 26.44879602259734 27.69334360998416 22.514927964630253 26 22.192341702890324 27.28353046006024 28.46578261738668 22.058345219662755 27 22.997388662407324 26.732118097170897 27.683058322696276 22.587434917725503 28 22.193113740756083 27.257904816112603 27.630583725281436 22.91839771784988 29 22.457656906813433 26.42884911993617 27.558224135287844 23.555269837962552 30 22.464358555640633 27.058022374153857 27.753572614360927 22.724046455844586 31 23.17228527867186 26.53133999661189 27.160935117736745 23.135439606979503 32 22.611415605172418 27.280804508036695 27.181452203749302 22.926327683041585 33 22.536573631749775 26.692144546310793 27.70558480542625 23.06569701651319 34 23.057898209531942 26.930794373564872 27.811841194740822 22.199466222162368 35 23.22004526327915 26.982978838739403 27.585444603302594 22.211531294678856 36 22.1537916833602 27.446537641549146 27.568848641831213 22.830822033259444 37 23.144852680847748 27.056903324823782 26.959836833430174 22.838407160898296 38 22.576093051463925 27.373169777247725 27.187161716898444 22.86357545438991 39 23.288792066595065 26.847914838543556 26.921180930826644 22.942112164034732 40 23.78459002702746 27.027038472842523 27.237939069208426 21.950432430921584 41 22.809655135028915 26.997482712707388 27.906230201349103 22.286631950914593 42 23.38310775329053 27.897023698609253 26.9045279758779 21.815340572222315 43 22.45516082475624 27.332924523827266 27.514178462289017 22.697736189127475 44 22.36303716458578 27.73025755780419 26.767411979838514 23.139293297771513 45 22.548356141062637 27.754819944997195 26.865661528610524 22.831162385329648 46 22.6557689457302 27.035043513244545 26.627225951256694 23.681961589768566 47 23.099035796805865 27.018016980275505 26.73825914908899 23.14468807382964 48 23.149399021053533 27.282606209932265 26.243608431576654 23.324386337437545 49 22.911288410068774 27.718094657316122 26.288748856591116 23.081868076023987 50 22.840914673293458 27.837179480664236 26.00117561164838 23.320730234393924 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 24.0 1 19.5 2 15.0 3 78.0 4 141.0 5 195.5 6 250.0 7 269.5 8 289.0 9 399.0 10 509.0 11 773.0 12 1037.0 13 1971.5 14 2906.0 15 3934.5 16 4963.0 17 5737.5 18 6512.0 19 6854.0 20 7196.0 21 7950.5 22 8705.0 23 9753.5 24 10802.0 25 12343.0 26 13884.0 27 17831.0 28 21778.0 29 25050.0 30 28322.0 31 31716.5 32 35111.0 33 40719.0 34 46327.0 35 51500.0 36 56673.0 37 61195.5 38 65718.0 39 66260.5 40 66803.0 41 69258.5 42 71714.0 43 72009.0 44 72304.0 45 75215.5 46 78127.0 47 80258.0 48 82389.0 49 83101.5 50 83814.0 51 79765.5 52 75717.0 53 72384.5 54 69052.0 55 67031.5 56 65011.0 57 61381.5 58 57752.0 59 51356.5 60 44961.0 61 38785.5 62 32610.0 63 27903.0 64 23196.0 65 19439.0 66 15682.0 67 13261.5 68 10841.0 69 9451.5 70 8062.0 71 6000.5 72 3939.0 73 3402.5 74 2866.0 75 2238.0 76 1610.0 77 1432.5 78 1255.0 79 1010.5 80 766.0 81 602.5 82 439.0 83 360.5 84 282.0 85 216.5 86 151.0 87 114.0 88 77.0 89 54.0 90 31.0 91 29.0 92 27.0 93 19.5 94 12.0 95 14.5 96 17.0 97 11.5 98 6.0 99 7.5 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008977846739686487 2 3.3878666942213154E-4 3 2.540900020665987E-4 4 0.0 5 0.0 6 1.6939333471106577E-4 7 8.469666735553289E-5 8 0.0 9 0.0010163600082663947 10 6.775733388442631E-4 11 0.0 12 3.3878666942213154E-4 13 4.2348333677766446E-4 14 1.6939333471106577E-4 15 0.005166496708687507 16 8.469666735553289E-4 17 0.0 18 1.6939333471106577E-4 19 1.6939333471106577E-4 20 5.928766714887303E-4 21 0.0 22 4.2348333677766446E-4 23 9.316633409108618E-4 24 6.775733388442631E-4 25 0.0011857533429774606 26 0.004743013371909842 27 0.005335890043398572 28 0.0036419566962879145 29 0.0026255966880215195 30 0.0030490800247991844 31 0.0071145200578647625 32 0.0031337766921547172 33 0.004404226702487711 34 0.0036419566962879145 35 0.0030490800247991844 36 0.007368610059931361 37 0.0042348333677766446 38 0.00762270006199796 39 0.004743013371909842 40 0.002794990022732585 41 0.004065440033065579 42 0.0020327200165327895 43 0.0016939333471106578 44 0.0014398433450440592 45 0.0014398433450440592 46 7.622700061997961E-4 47 0.0016939333471106578 48 0.0022868100185993883 49 3.3878666942213154E-4 50 0.0018633266818217236 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1180684.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.36140152794419 #Duplication Level Percentage of deduplicated Percentage of total 1 70.27721005654028 37.50090424090723 2 16.215033272908308 17.305138025292706 3 6.256049536789966 10.014947139340759 4 2.8822264649461533 6.151985747618354 5 1.4926690323586145 3.9825455792007975 6 0.8572761262384089 2.7447273355516986 7 0.5331034346990982 1.9913002504433328 8 0.33425069920841943 1.4268868617165253 9 0.21938680957146023 1.0536108871929586 >10 0.7979930300876802 7.136216246031407 >50 0.07014667733391619 2.6465102993405254 >100 0.05954633226906265 6.138743984474646 >500 0.004789244108090668 1.6830380961072064 >1k 3.192829405393778E-4 0.22344530678185975 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1400 0.11857533429774605 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1223 0.10358402417581672 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 8.46966673555329E-5 0.0 11 0.0 0.0 0.0 8.46966673555329E-5 0.0 12 0.0 0.0 0.0 8.46966673555329E-5 0.0 13 0.0 0.0 0.0 8.46966673555329E-5 0.0 14 0.0 0.0 0.0 8.46966673555329E-5 0.0 15 0.0 0.0 0.0 8.46966673555329E-5 0.0 16 0.0 0.0 0.0 8.46966673555329E-5 0.0 17 0.0 0.0 0.0 8.46966673555329E-5 0.0 18 0.0 0.0 0.0 8.46966673555329E-5 0.0 19 0.0 0.0 0.0 8.46966673555329E-5 0.0 20 0.0 0.0 0.0 8.46966673555329E-5 0.0 21 0.0 0.0 0.0 8.46966673555329E-5 0.0 22 0.0 0.0 0.0 1.693933347110658E-4 0.0 23 0.0 0.0 0.0 4.2348333677766446E-4 0.0 24 0.0 0.0 0.0 6.775733388442632E-4 0.0 25 0.0 0.0 0.0 0.0011857533429774606 0.0 26 0.0 0.0 0.0 0.0012704500103329934 0.0 27 0.0 0.0 0.0 0.0014398433450440592 0.0 28 0.0 0.0 0.0 0.0022868100185993883 0.0 29 0.0 0.0 0.0 0.00440422670248771 0.0 30 0.0 0.0 0.0 0.007961486731420091 0.0 31 0.0 0.0 0.0 0.016769940136395513 0.0 32 0.0 0.0 0.0 0.026086573545504133 0.0 33 0.0 0.0 0.0 0.03396336360956869 0.0 34 0.0 0.0 0.0 0.04344939035338837 0.0 35 0.0 0.0 0.0 0.056662070460851505 0.0 36 0.0 0.0 0.0 0.07470246060758001 0.0 37 0.0 0.0 0.0 0.10383811417788333 0.0 38 0.0 0.0 0.0 0.14762629120069384 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATATAC 630 0.0 20.951595 1 TAGGACG 490 0.0 20.652287 4 TATACCG 65 4.9333175E-4 20.30693 5 GTTCCGT 55 0.004484526 19.999249 30 GTAGGAC 790 0.0 19.77141 3 ATCACGG 335 0.0 19.703257 35 TAGGACC 780 0.0 19.460808 4 GTCCTAC 735 0.0 19.455053 1 GATTTCG 295 0.0 19.390743 41 TGTAGGA 845 0.0 19.0044 2 AGGACGT 535 0.0 18.915176 5 AAGCGTA 70 8.125222E-4 18.856436 5 ATTTCGT 315 0.0 18.856436 42 AATCACG 365 0.0 18.685022 34 ATTCGTG 95 1.5964102E-5 18.52719 44 TCGTGAA 95 1.5975755E-5 18.52562 16 CTGTAGG 820 0.0 18.5115 1 AAGGCGT 155 7.221388E-10 18.45092 6 GTAAGCG 60 0.0074136076 18.332645 3 ATACACT 725 0.0 18.206213 4 >>END_MODULE