##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064198_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1293987 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.262657198256242 32.0 32.0 32.0 32.0 32.0 2 31.403572833421048 32.0 32.0 32.0 32.0 32.0 3 31.474671692992278 32.0 32.0 32.0 32.0 32.0 4 31.562509515165143 32.0 32.0 32.0 32.0 32.0 5 31.507409270726832 32.0 32.0 32.0 32.0 32.0 6 35.088633038817235 36.0 36.0 36.0 36.0 36.0 7 35.11186202025213 36.0 36.0 36.0 36.0 36.0 8 35.055502103189596 36.0 36.0 36.0 36.0 36.0 9 35.17120496573768 36.0 36.0 36.0 36.0 36.0 10 35.02308214842962 36.0 36.0 36.0 36.0 36.0 11 35.16519022215834 36.0 36.0 36.0 36.0 36.0 12 35.07422253855719 36.0 36.0 36.0 36.0 36.0 13 35.12016040346619 36.0 36.0 36.0 36.0 36.0 14 35.065936520227794 36.0 36.0 36.0 36.0 36.0 15 35.04181340307128 36.0 36.0 36.0 36.0 36.0 16 35.05392326198022 36.0 36.0 36.0 36.0 36.0 17 35.01463229537855 36.0 36.0 36.0 36.0 36.0 18 35.00873501820343 36.0 36.0 36.0 36.0 36.0 19 35.00362213839861 36.0 36.0 36.0 36.0 36.0 20 34.995411082182436 36.0 36.0 36.0 36.0 36.0 21 34.98678580233032 36.0 36.0 36.0 36.0 36.0 22 34.97468753550074 36.0 36.0 36.0 36.0 36.0 23 34.926440528382436 36.0 36.0 36.0 36.0 36.0 24 34.895687514635 36.0 36.0 36.0 32.0 36.0 25 34.87263241439056 36.0 36.0 36.0 32.0 36.0 26 34.8176558187988 36.0 36.0 36.0 32.0 36.0 27 34.80397716514926 36.0 36.0 36.0 32.0 36.0 28 34.78040196694403 36.0 36.0 36.0 32.0 36.0 29 34.74577333466256 36.0 36.0 36.0 32.0 36.0 30 34.718321745118 36.0 36.0 36.0 32.0 36.0 31 34.71304580339679 36.0 36.0 36.0 32.0 36.0 32 34.664230784389645 36.0 36.0 36.0 32.0 36.0 33 34.64256364244772 36.0 36.0 36.0 32.0 36.0 34 34.62042895330479 36.0 36.0 36.0 32.0 36.0 35 34.58076935857934 36.0 36.0 36.0 32.0 36.0 36 34.54313683213201 36.0 36.0 36.0 32.0 36.0 37 34.51821386149938 36.0 36.0 36.0 32.0 36.0 38 34.47622039479531 36.0 36.0 36.0 32.0 36.0 39 34.457319122989645 36.0 36.0 36.0 32.0 36.0 40 34.43674550053439 36.0 36.0 36.0 32.0 36.0 41 34.40309833097241 36.0 36.0 36.0 32.0 36.0 42 34.33802039742285 36.0 36.0 36.0 32.0 36.0 43 34.331450006839326 36.0 36.0 36.0 32.0 36.0 44 34.25183869698846 36.0 36.0 36.0 32.0 36.0 45 34.205607938874195 36.0 36.0 36.0 32.0 36.0 46 34.161903481256 36.0 36.0 36.0 32.0 36.0 47 34.11855219565575 36.0 36.0 36.0 32.0 36.0 48 34.05939085941358 36.0 36.0 36.0 32.0 36.0 49 34.035971767877115 36.0 36.0 36.0 32.0 36.0 50 33.450973618745785 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 12.0 21 32.0 22 135.0 23 395.0 24 1139.0 25 2571.0 26 5306.0 27 9642.0 28 16052.0 29 24134.0 30 34229.0 31 47529.0 32 68335.0 33 108642.0 34 222588.0 35 753243.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.02550702190854 18.676398643149785 12.243107740368304 26.05498659457337 2 15.121052501421964 21.145624675421026 38.36353463412222 25.369788189034796 3 17.6033632668202 25.814773025858205 29.509575109352543 27.072288597969056 4 11.739839735638766 16.870262220563266 37.41080860936006 33.9790894344379 5 13.266284746291888 38.13600909437266 34.01772969898461 14.579976460350839 6 32.391770216455704 37.15017894361827 17.464448914707535 12.993601925218492 7 28.79155663851337 31.40819807308729 21.845119000422724 17.95512628797662 8 27.176934544164666 34.04616893369099 19.94100404409009 18.835892478054262 9 27.564970493951957 14.019932425122029 19.0867344888452 39.328362592080815 10 15.345350567051142 27.359802160010823 32.76547073938832 24.529376533549723 11 36.0900349771945 21.358809137038577 23.946472372962305 18.60468351280462 12 24.572290581196395 24.193461134819078 30.021035776275784 21.21321250770874 13 29.466575165883807 20.251117097817737 25.880038145934474 24.40226959036398 14 22.859966908477443 20.589619524771113 26.38890498899912 30.16150857775233 15 24.334997754924288 28.651803054694064 23.074741313952778 23.93845787642887 16 24.361308650714776 26.239321655612862 25.542398842635166 23.856970851037193 17 22.885392202549177 26.65111782421307 26.41981720063648 24.043672772601273 18 23.538603615961545 25.547436794089577 28.075750491698127 22.838209098250754 19 24.99153777552462 25.161786912686846 26.473083943721182 23.373591368067352 20 25.208754674520456 24.993218612609287 26.375230586491476 23.422796126378785 21 26.014094422896054 24.530153703244313 25.494228303684658 23.96152357017497 22 25.073126926706145 25.35605181830055 25.96950655456834 23.601314700424965 23 23.512596378777772 25.340672945471464 26.562791010391944 24.583939665358816 24 24.23014830952184 25.569501299476116 26.583888660051947 23.616461730950096 25 24.080215089828133 25.30798603678135 26.731124576980474 23.880674296410042 26 23.4256597958302 26.17396862100759 27.122015761370655 23.27835582179156 27 23.96695620050405 25.949383230325857 26.265477205296467 23.818183363873626 28 23.365006742997135 25.75701252381302 26.748252423807994 24.129728309381846 29 23.73194019930987 25.41382494889738 26.411147133036827 24.44308771875592 30 23.432603395043838 25.76338252398672 26.869843772339628 23.93417030862981 31 24.403855636224804 25.349447947210678 25.942539520116732 24.304156896447786 32 23.662424861624828 26.02867507608509 25.99358860416123 24.315311458128853 33 23.32604026669284 25.73066558056391 26.76140697707669 24.181887175666557 34 24.14015623406051 25.576449276482354 26.8610370058951 23.42235748356204 35 24.435197986937663 25.66863145301708 26.53814022036417 23.358030339681086 36 23.513863599125738 26.122350242524107 26.339756332058627 24.024029826291528 37 24.410077430114665 25.844532324116788 25.758902453821307 23.986487791947237 38 23.801011220497696 26.194815292275493 26.146742902366675 23.857430584860133 39 24.452696619227396 25.595798861612057 25.736455076955178 24.215049442205366 40 24.84651671777624 25.764015975863092 26.251282891482834 23.138184414877834 41 23.865425293077053 25.798045199827197 26.811768370013205 23.524761137082546 42 24.52974252920465 26.621441576788367 26.02714741895497 22.82166847505201 43 23.53680806881772 25.91298555065848 26.432472493545056 24.117733886978744 44 23.40069707953044 26.270006259805097 25.94766493813612 24.381631722528343 45 23.687143153020312 26.497636734025154 25.907670335988726 23.90754977696581 46 23.695707110713716 25.832375691376274 25.869547913139108 24.6023692847709 47 24.209310143628304 25.851472025904876 26.065079040004946 23.874138790461874 48 24.244321154525338 26.38873110561381 25.248286473632675 24.11866126622817 49 23.889262841938418 26.313483252871173 25.571046914835822 24.226206990354587 50 23.649812050993532 26.981733705933998 25.238645777948143 24.12980846512433 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 146.0 1 93.0 2 40.0 3 174.0 4 308.0 5 348.0 6 388.0 7 384.0 8 380.0 9 505.0 10 630.0 11 975.5 12 1321.0 13 2205.5 14 3090.0 15 4059.0 16 5028.0 17 5411.5 18 5795.0 19 5925.5 20 6056.0 21 6610.0 22 7164.0 23 7992.0 24 8820.0 25 9902.0 26 10984.0 27 13884.5 28 16785.0 29 20193.5 30 23602.0 31 26675.5 32 29749.0 33 35104.5 34 40460.0 35 46696.5 36 52933.0 37 57700.0 38 62467.0 39 64383.5 40 66300.0 41 69513.0 42 72726.0 43 72002.5 44 71279.0 45 76754.5 46 82230.0 47 86093.0 48 89956.0 49 91657.0 50 93358.0 51 89984.0 52 86610.0 53 84873.0 54 83136.0 55 81864.0 56 80592.0 57 78265.5 58 75939.0 59 68634.5 60 61330.0 61 53734.5 62 46139.0 63 39768.5 64 33398.0 65 28334.5 66 23271.0 67 20021.5 68 16772.0 69 15022.5 70 13273.0 71 10440.5 72 7608.0 73 6515.5 74 5423.0 75 4186.5 76 2950.0 77 2598.5 78 2247.0 79 1823.5 80 1400.0 81 1126.5 82 853.0 83 693.0 84 533.0 85 397.0 86 261.0 87 184.0 88 107.0 89 82.5 90 58.0 91 45.5 92 33.0 93 25.0 94 17.0 95 19.5 96 22.0 97 16.0 98 10.0 99 10.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008346297142088753 2 2.3184158728024317E-4 3 5.409637036539007E-4 4 0.0 5 0.0 6 3.0912211637365756E-4 7 0.0 8 0.0 9 0.0011592079364012159 10 9.273663491209727E-4 11 7.728052909341439E-5 12 7.728052909341439E-5 13 6.955247618407295E-4 14 0.0 15 0.003400343280110233 16 0.001004646878214387 17 0.0 18 1.5456105818682878E-4 19 7.728052909341439E-5 20 3.0912211637365756E-4 21 0.0 22 3.0912211637365756E-4 23 3.0912211637365756E-4 24 3.0912211637365756E-4 25 0.0012364884654946303 26 0.004945953861978521 27 0.005255075978352178 28 0.004018587512857548 29 0.0017001716400551164 30 0.003245782221923404 31 0.00687796708931388 32 0.00316850169282999 33 0.004945953861978521 34 0.002395696401895846 35 0.0029366601055497467 36 0.007341650263874368 37 0.0035549043382970616 38 0.008114455554808511 39 0.004018587512857548 40 0.0027048185182695036 41 0.003400343280110233 42 0.0011592079364012159 43 0.001391049523681459 44 0.0013137689945880444 45 0.0011592079364012159 46 7.728052909341439E-4 47 0.0017001716400551164 48 0.001391049523681459 49 3.0912211637365756E-4 50 0.0014683300527748733 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1293987.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.95260612094667 #Duplication Level Percentage of deduplicated Percentage of total 1 77.59893536900766 44.970605368448986 2 13.732767447889149 15.916993257161558 3 4.095183384200811 7.119796489729051 4 1.6942337844365218 3.927410527450025 5 0.8360040080948471 2.422430549832669 6 0.484370106793423 1.6842306009456072 7 0.29352820165179533 1.1907506979001412 8 0.20766997601410053 0.9628013058473288 9 0.15077902518106528 0.7864233711856717 >10 0.765215842879828 8.06557411020139 >50 0.06890126083121788 2.7934171928440374 >100 0.0665114060364685 7.65429870547646 >500 0.005229711189513356 2.0684506993045186 >1k 6.704757935273533E-4 0.4368171236724912 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1351 0.10440599480520284 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 2.3184158728024315E-4 13 0.0 0.0 0.0 0.0 3.0912211637365756E-4 14 0.0 0.0 0.0 0.0 3.0912211637365756E-4 15 0.0 0.0 0.0 7.728052909341439E-5 3.864026454670719E-4 16 0.0 0.0 0.0 7.728052909341439E-5 3.864026454670719E-4 17 0.0 0.0 0.0 1.5456105818682878E-4 3.864026454670719E-4 18 0.0 0.0 0.0 3.864026454670719E-4 3.864026454670719E-4 19 0.0 0.0 0.0 3.864026454670719E-4 3.864026454670719E-4 20 0.0 0.0 0.0 5.409637036539007E-4 4.636831745604863E-4 21 0.0 0.0 0.0 6.182442327473151E-4 4.636831745604863E-4 22 0.0 0.0 0.0 8.500858200275582E-4 4.636831745604863E-4 23 0.0 0.0 0.0 0.0023184158728024313 4.636831745604863E-4 24 0.0 0.0 0.0 0.00440499015832462 4.636831745604863E-4 25 0.0 0.0 0.0 0.006027881269286322 4.636831745604863E-4 26 0.0 0.0 0.0 0.007418930792967781 6.182442327473151E-4 27 0.0 0.0 0.0 0.009119102433022898 6.182442327473151E-4 28 0.0 0.0 0.0 0.013524092591347518 6.182442327473151E-4 29 0.0 0.0 0.0 0.021252145500688956 6.182442327473151E-4 30 0.0 0.0 0.0 0.0343898354465694 6.182442327473151E-4 31 0.0 0.0 0.0 0.06321547279841297 6.955247618407295E-4 32 0.0 0.0 0.0 0.09590513660492725 6.955247618407295E-4 33 0.0 0.0 0.0 0.12519445713133132 6.955247618407295E-4 34 0.0 0.0 0.0 0.15425193607045512 9.273663491209726E-4 35 0.0 0.0 0.0 0.1901873820988928 9.273663491209726E-4 36 0.0 0.0 0.0 0.24096068971326606 9.273663491209726E-4 37 0.0 0.0 0.0 0.32048235415038945 9.273663491209726E-4 38 0.0 0.0 0.0 0.4275158869447684 9.273663491209726E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATATAC 335 0.0 20.35828 1 CTAAGAC 235 0.0 18.722023 3 CGCAAAT 165 8.185452E-11 18.668175 23 GACGTGA 430 0.0 18.417246 7 TAGGACG 825 0.0 18.131994 4 TTAGGAC 535 0.0 17.680939 3 TAACGGC 175 1.9099389E-10 17.600742 36 TTAACGG 175 1.9099389E-10 17.600742 35 ACTATAC 150 9.606083E-9 17.598701 3 ACCGTCG 265 0.0 17.432676 8 ATACACT 505 0.0 17.424456 4 ATTGTCG 140 8.37681E-8 17.285107 43 AGGACGT 850 0.0 17.08109 5 GATATAT 155 1.4391844E-8 17.032318 1 GGACGTG 845 0.0 16.92183 6 TAAGACC 195 4.9112714E-11 16.921827 4 GTCCTAC 875 0.0 16.845774 1 GTATCAA 3725 0.0 16.773212 1 GTGTATA 555 0.0 16.648706 1 TCCTAAA 565 0.0 16.352776 2 >>END_MODULE