##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064197_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1057820 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.945122043447846 32.0 32.0 32.0 32.0 32.0 2 30.57017923654308 32.0 32.0 32.0 32.0 32.0 3 31.031047815318296 32.0 32.0 32.0 32.0 32.0 4 31.29469853094099 32.0 32.0 32.0 32.0 32.0 5 31.10581951560757 32.0 32.0 32.0 32.0 32.0 6 34.707359475147 36.0 36.0 36.0 32.0 36.0 7 34.76478039742111 36.0 36.0 36.0 32.0 36.0 8 34.63278062430281 36.0 36.0 36.0 32.0 36.0 9 34.908480648881664 36.0 36.0 36.0 32.0 36.0 10 34.544415874156286 36.0 36.0 36.0 32.0 36.0 11 34.909320111172036 36.0 36.0 36.0 32.0 36.0 12 34.73593711595546 36.0 36.0 36.0 32.0 36.0 13 34.835582613299046 36.0 36.0 36.0 32.0 36.0 14 34.75162409483655 36.0 36.0 36.0 32.0 36.0 15 34.67282997107258 36.0 36.0 36.0 32.0 36.0 16 34.71426424155338 36.0 36.0 36.0 32.0 36.0 17 34.655380877654046 36.0 36.0 36.0 32.0 36.0 18 34.67118602408728 36.0 36.0 36.0 32.0 36.0 19 34.66298614130949 36.0 36.0 36.0 32.0 36.0 20 34.66879998487455 36.0 36.0 36.0 32.0 36.0 21 34.666115218090034 36.0 36.0 36.0 32.0 36.0 22 34.64105991567563 36.0 36.0 36.0 32.0 36.0 23 34.577834603240625 36.0 36.0 36.0 32.0 36.0 24 34.54405853547863 36.0 36.0 36.0 32.0 36.0 25 34.50725359702029 36.0 36.0 36.0 32.0 36.0 26 34.4255478247717 36.0 36.0 36.0 32.0 36.0 27 34.426226579191166 36.0 36.0 36.0 32.0 36.0 28 34.38773798945 36.0 36.0 36.0 32.0 36.0 29 34.35832561305326 36.0 36.0 36.0 32.0 36.0 30 34.33060255998185 36.0 36.0 36.0 32.0 36.0 31 34.34311414040196 36.0 36.0 36.0 32.0 36.0 32 34.28648257737611 36.0 36.0 36.0 32.0 36.0 33 34.262311168251685 36.0 36.0 36.0 32.0 36.0 34 34.23249607683727 36.0 36.0 36.0 32.0 36.0 35 34.19944224915392 36.0 36.0 36.0 32.0 36.0 36 34.14575636686771 36.0 36.0 36.0 32.0 36.0 37 34.14920402336882 36.0 36.0 36.0 32.0 36.0 38 34.0889830027793 36.0 36.0 36.0 32.0 36.0 39 34.07526516798699 36.0 36.0 36.0 32.0 36.0 40 34.06416119944792 36.0 36.0 36.0 32.0 36.0 41 34.034756385774514 36.0 36.0 36.0 32.0 36.0 42 33.959668941785935 36.0 36.0 36.0 32.0 36.0 43 33.94902251800873 36.0 36.0 36.0 32.0 36.0 44 33.85335028643814 36.0 36.0 36.0 32.0 36.0 45 33.81389083208864 36.0 36.0 36.0 32.0 36.0 46 33.78164337978106 36.0 36.0 36.0 32.0 36.0 47 33.75287572554877 36.0 36.0 36.0 32.0 36.0 48 33.70413491898432 36.0 36.0 36.0 27.0 36.0 49 33.684271426140555 36.0 36.0 36.0 27.0 36.0 50 32.89789567223157 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 0.0 18 1.0 19 2.0 20 4.0 21 26.0 22 105.0 23 333.0 24 777.0 25 1855.0 26 3931.0 27 7774.0 28 13393.0 29 22294.0 30 34896.0 31 54367.0 32 84760.0 33 143125.0 34 267149.0 35 423027.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.471913107846596 18.26463383851514 12.01044460473959 25.253008448898672 2 15.807584502015947 20.5980251745343 38.34857701961118 25.24581330383857 3 18.54731291459125 24.830996607170036 29.26899592463361 27.352694553605104 4 12.210962167476508 16.646688472518953 37.26219961808247 33.88014974192207 5 14.26792838101 37.23194872473577 33.447656501106046 15.052466393148173 6 33.61564349322191 37.02851146697926 16.769677260781606 12.586167779017224 7 29.698492557320826 30.96250961885693 20.89291352576719 18.44608429805505 8 27.470552646007828 34.261972736382376 19.251573991794444 19.01590062581536 9 27.46211512464431 13.730821224983691 18.299127442546393 40.5079362078256 10 15.086707278798123 27.124385051408 32.49698434126291 25.29192332853097 11 37.27064838124481 20.71148277729933 23.192909183896298 18.824959657559564 12 24.629426556503 23.413340643965892 29.738235238509386 22.218997561021723 13 29.705138034272473 19.71475217358012 25.469339214627862 25.110770577519553 14 23.10248369992163 20.05517022320496 25.62097224756267 31.22137382931074 15 24.771078460104405 28.230662912914333 22.365298841164467 24.63295978581679 16 25.021931980609104 25.942791562993943 24.868597185143727 24.166679271253226 17 23.41324610992418 26.34890624113743 25.775935414342705 24.46191223459568 18 24.12071275088224 25.39305002661141 27.09391132870809 23.392325893798265 19 25.535086815419273 24.87079547635276 25.593130771899542 24.000986936328427 20 25.586610135042516 24.745253186993946 25.478179076681652 24.18995760128189 21 26.51642056304475 24.380707492768146 24.553893857177968 24.548978087009132 22 25.41533609751394 25.14969493807063 25.191100926624426 24.243868037791 23 23.988315537215865 24.754895704825515 25.730680695584766 25.526108062373854 24 24.58504203936783 25.243283816308665 25.68939080257662 24.48228334174688 25 24.749221738937255 24.860016997429586 25.878539279849726 24.51222198378343 26 23.96383723161775 25.865001280993184 26.24362694075194 23.927534546637133 27 24.650563022501046 25.31753032077771 25.5414914164003 24.49041524032094 28 23.92542165861369 25.372215767446566 25.858419511678626 24.84394306226112 29 24.044620911325392 25.010115333711475 25.72329362828512 25.221970126678013 30 24.083090059293323 25.40641260285576 25.958411483543074 24.552085854307844 31 24.91715898573291 24.928692912968955 25.17109446570027 24.98305363559786 32 24.43285002963729 25.53278583914183 25.154544053681782 24.879820077539094 33 24.045003729512498 25.0367042643123 25.886598240275145 25.03169376590006 34 24.67656715444326 25.30646355194258 25.971527510580994 24.045441783033166 35 25.177870843929323 25.135423855396628 25.765038429177817 23.92166687149623 36 24.04922916349562 25.706241662703842 25.5806917911372 24.66383738266334 37 24.870342394397355 25.412134401476287 25.12549797407037 24.592025230055985 38 24.44710418067046 25.520326655945784 25.35611000341291 24.676459159970843 39 25.17721109722456 24.858146038204616 25.094963215343864 24.869679649226963 40 25.7285660670242 25.173544640417774 25.3789715796131 23.718917712944922 41 24.285719687874018 25.21540436651169 26.335677240403943 24.163198705210355 42 25.44443698661088 26.013826823432428 25.25564875746716 23.286087432489538 43 24.388000412175046 25.21301225275406 25.802252404275656 24.596734930795243 44 24.1430880781993 25.725697431485806 25.141566065739596 24.989648424575304 45 24.396838346721168 25.92897908018616 25.16513030333683 24.509052269755845 46 24.23994055654502 25.16628663694494 25.206463908520604 25.387308897989435 47 24.88513940200642 25.15494363795183 25.51578553304771 24.444131426994037 48 25.179167844417744 25.488297959835776 24.63946636768333 24.693067828063153 49 24.63112677441067 25.643968327194898 25.01937955183132 24.705525346563107 50 24.6920022688599 25.951975798827753 24.53053507279259 24.825486859519756 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 8.0 1 10.5 2 13.0 3 42.5 4 72.0 5 104.5 6 137.0 7 126.0 8 115.0 9 176.5 10 238.0 11 340.5 12 443.0 13 787.5 14 1132.0 15 1597.5 16 2063.0 17 2266.5 18 2470.0 19 2616.5 20 2763.0 21 3201.0 22 3639.0 23 4297.5 24 4956.0 25 6054.0 26 7152.0 27 9695.0 28 12238.0 29 14529.5 30 16821.0 31 19190.5 32 21560.0 33 25487.5 34 29415.0 35 34186.0 36 38957.0 37 43360.0 38 47763.0 39 50024.5 40 52286.0 41 54782.5 42 57279.0 43 57416.0 44 57553.0 45 62665.5 46 67778.0 47 71549.5 48 75321.0 49 76912.0 50 78503.0 51 75835.5 52 73168.0 53 71386.0 54 69604.0 55 69758.5 56 69913.0 57 68295.5 58 66678.0 59 60180.0 60 53682.0 61 47550.0 62 41418.0 63 36141.5 64 30865.0 65 26224.0 66 21583.0 67 18755.0 68 15927.0 69 14450.5 70 12974.0 71 10136.0 72 7298.0 73 6217.5 74 5137.0 75 4091.0 76 3045.0 77 2656.5 78 2268.0 79 1851.5 80 1435.0 81 1186.0 82 937.0 83 753.0 84 569.0 85 423.0 86 277.0 87 204.5 88 132.0 89 107.5 90 83.0 91 68.0 92 53.0 93 41.0 94 29.0 95 29.5 96 30.0 97 22.0 98 14.0 99 20.0 100 26.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00463216804371254 2 4.72670208542096E-4 3 9.45340417084192E-5 4 0.0 5 0.0 6 0.0 7 1.890680834168384E-4 8 0.0 9 9.45340417084192E-4 10 7.562723336673536E-4 11 9.45340417084192E-5 12 0.0 13 2.836021251252576E-4 14 2.836021251252576E-4 15 0.0032141574180862527 16 3.781361668336768E-4 17 0.0 18 2.836021251252576E-4 19 9.45340417084192E-5 20 4.72670208542096E-4 21 0.0 22 1.890680834168384E-4 23 4.72670208542096E-4 24 1.890680834168384E-4 25 0.0012289425422094497 26 0.004443099960295703 27 0.004443099960295703 28 0.0031196233763778336 29 0.001890680834168384 30 0.0026469531678357376 31 0.006711916961297764 32 0.0029305552929609954 33 0.0038758957100451874 34 0.0025524191261273184 35 0.0028360212512525762 36 0.006900985044714602 37 0.0032141574180862527 38 0.006711916961297764 39 0.0039704297517536066 40 0.0021742829592936415 41 0.0039704297517536066 42 0.0019852148758768033 43 0.0016070787090431264 44 9.45340417084192E-4 45 0.0017961467924599648 46 7.562723336673536E-4 47 0.0015125446673347072 48 0.0012289425422094497 49 3.781361668336768E-4 50 0.001890680834168384 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1057820.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.06721410228614 #Duplication Level Percentage of deduplicated Percentage of total 1 81.51906981719253 49.78142489945708 2 11.354350550216699 13.867571120849872 3 3.2488758628184606 5.951993937194537 4 1.2972895195735432 3.1688742737779796 5 0.6877751500564777 2.100025617136545 6 0.3971211774619826 1.455065038117372 7 0.26713809004356603 1.1419365257696368 8 0.1853328245873769 0.905420742340703 9 0.14557304817712252 0.8000766450499279 >10 0.7680937510360886 8.601834811824423 >50 0.06400334893574766 2.7545371099541818 >100 0.060562887916122916 7.373484455453816 >500 0.0043481037278092554 1.7961924914716536 >1k 4.6586825655099164E-4 0.30156233160233664 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1096 0.10360930971242745 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.45340417084192E-5 2 0.0 0.0 0.0 0.0 9.45340417084192E-5 3 0.0 0.0 0.0 0.0 9.45340417084192E-5 4 0.0 0.0 0.0 0.0 9.45340417084192E-5 5 0.0 0.0 0.0 0.0 9.45340417084192E-5 6 0.0 0.0 0.0 0.0 9.45340417084192E-5 7 0.0 0.0 0.0 0.0 9.45340417084192E-5 8 0.0 0.0 0.0 0.0 9.45340417084192E-5 9 0.0 0.0 0.0 0.0 9.45340417084192E-5 10 0.0 0.0 0.0 9.45340417084192E-5 9.45340417084192E-5 11 0.0 0.0 0.0 9.45340417084192E-5 9.45340417084192E-5 12 0.0 0.0 0.0 9.45340417084192E-5 2.836021251252576E-4 13 0.0 0.0 0.0 9.45340417084192E-5 2.836021251252576E-4 14 0.0 0.0 0.0 9.45340417084192E-5 2.836021251252576E-4 15 9.45340417084192E-5 0.0 0.0 9.45340417084192E-5 2.836021251252576E-4 16 9.45340417084192E-5 0.0 0.0 9.45340417084192E-5 2.836021251252576E-4 17 9.45340417084192E-5 0.0 0.0 9.45340417084192E-5 2.836021251252576E-4 18 9.45340417084192E-5 0.0 0.0 9.45340417084192E-5 2.836021251252576E-4 19 9.45340417084192E-5 0.0 0.0 9.45340417084192E-5 2.836021251252576E-4 20 9.45340417084192E-5 0.0 0.0 9.45340417084192E-5 3.781361668336768E-4 21 9.45340417084192E-5 0.0 0.0 9.45340417084192E-5 4.72670208542096E-4 22 9.45340417084192E-5 0.0 0.0 1.890680834168384E-4 4.72670208542096E-4 23 9.45340417084192E-5 0.0 0.0 3.781361668336768E-4 4.72670208542096E-4 24 9.45340417084192E-5 0.0 0.0 3.781361668336768E-4 5.672042502505152E-4 25 9.45340417084192E-5 0.0 0.0 3.781361668336768E-4 5.672042502505152E-4 26 9.45340417084192E-5 0.0 0.0 5.672042502505152E-4 5.672042502505152E-4 27 9.45340417084192E-5 0.0 0.0 0.0010398744587926112 6.617382919589344E-4 28 9.45340417084192E-5 0.0 0.0 0.0014180106256262881 6.617382919589344E-4 29 9.45340417084192E-5 0.0 0.0 0.0031196233763778336 6.617382919589344E-4 30 9.45340417084192E-5 0.0 0.0 0.006333780794464086 6.617382919589344E-4 31 9.45340417084192E-5 0.0 0.0 0.0142746402979713 6.617382919589344E-4 32 9.45340417084192E-5 0.0 0.0 0.02268817001002061 8.508063753757728E-4 33 9.45340417084192E-5 0.0 0.0 0.031857972055737274 8.508063753757728E-4 34 9.45340417084192E-5 0.0 0.0 0.04206764856024654 8.508063753757728E-4 35 9.45340417084192E-5 0.0 0.0 0.05473521014917472 8.508063753757728E-4 36 9.45340417084192E-5 0.0 0.0 0.07175133765669017 8.508063753757728E-4 37 9.45340417084192E-5 0.0 0.0 0.10285303737876009 8.508063753757728E-4 38 9.45340417084192E-5 0.0 0.0 0.1443534816887561 8.508063753757728E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 25 0.0023530948 35.198677 4 TAACGGC 70 3.2111064E-5 22.003332 36 GTATCAA 1980 0.0 20.888103 1 CGAATGC 295 0.0 20.881557 43 ATACGAA 295 0.0 20.135788 40 CGCAATA 315 0.0 19.558517 36 GTCCTAC 640 0.0 19.249275 1 ATTACTC 80 8.989815E-5 19.249275 3 GTAATAC 115 2.0216066E-7 19.129715 3 TGTAGGA 775 0.0 19.018639 2 GTCCTAA 290 0.0 18.964804 1 TACGAAT 325 0.0 18.95403 41 GATATAC 445 0.0 18.78581 1 TCTAGCG 330 0.0 18.666847 28 CGTGATT 225 0.0 18.577955 28 CGGTCCA 345 0.0 18.491184 10 TTAACGG 85 1.42896E-4 18.120392 35 CTGTAGG 850 0.0 17.858152 1 TCCTACA 765 0.0 17.829393 2 TAGGACG 605 0.0 17.81751 4 >>END_MODULE