##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064196_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1647481 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.354516379855063 32.0 32.0 32.0 32.0 32.0 2 31.43947031862583 32.0 32.0 32.0 32.0 32.0 3 31.504674712485304 32.0 32.0 32.0 32.0 32.0 4 31.58564802871778 32.0 32.0 32.0 32.0 32.0 5 31.53848511758254 32.0 32.0 32.0 32.0 32.0 6 35.14495341676171 36.0 36.0 36.0 36.0 36.0 7 35.15983735169025 36.0 36.0 36.0 36.0 36.0 8 35.11160189404309 36.0 36.0 36.0 36.0 36.0 9 35.21228530101409 36.0 36.0 36.0 36.0 36.0 10 35.079564498771155 36.0 36.0 36.0 36.0 36.0 11 35.21036540026865 36.0 36.0 36.0 36.0 36.0 12 35.1273774932761 36.0 36.0 36.0 36.0 36.0 13 35.15673625371097 36.0 36.0 36.0 36.0 36.0 14 35.11014026868899 36.0 36.0 36.0 36.0 36.0 15 35.08432995585382 36.0 36.0 36.0 36.0 36.0 16 35.091452951505964 36.0 36.0 36.0 36.0 36.0 17 35.05808807506733 36.0 36.0 36.0 36.0 36.0 18 35.059377923023085 36.0 36.0 36.0 36.0 36.0 19 35.06126322549395 36.0 36.0 36.0 36.0 36.0 20 35.04455407983461 36.0 36.0 36.0 36.0 36.0 21 35.052608193964 36.0 36.0 36.0 36.0 36.0 22 35.03467900388532 36.0 36.0 36.0 36.0 36.0 23 34.984232898588814 36.0 36.0 36.0 36.0 36.0 24 34.95955643798016 36.0 36.0 36.0 36.0 36.0 25 34.93216492329805 36.0 36.0 36.0 36.0 36.0 26 34.876459273278414 36.0 36.0 36.0 32.0 36.0 27 34.87765261025772 36.0 36.0 36.0 32.0 36.0 28 34.8559352126064 36.0 36.0 36.0 32.0 36.0 29 34.82440950760586 36.0 36.0 36.0 32.0 36.0 30 34.81333563179181 36.0 36.0 36.0 32.0 36.0 31 34.80636256199616 36.0 36.0 36.0 32.0 36.0 32 34.76863223308797 36.0 36.0 36.0 32.0 36.0 33 34.74142463554966 36.0 36.0 36.0 32.0 36.0 34 34.74131598482774 36.0 36.0 36.0 32.0 36.0 35 34.704655167495105 36.0 36.0 36.0 32.0 36.0 36 34.678331950414 36.0 36.0 36.0 32.0 36.0 37 34.6689321454997 36.0 36.0 36.0 32.0 36.0 38 34.63990662107788 36.0 36.0 36.0 32.0 36.0 39 34.64384536149431 36.0 36.0 36.0 32.0 36.0 40 34.617839598757136 36.0 36.0 36.0 32.0 36.0 41 34.60250224433544 36.0 36.0 36.0 32.0 36.0 42 34.53327291786673 36.0 36.0 36.0 32.0 36.0 43 34.52443700412933 36.0 36.0 36.0 32.0 36.0 44 34.470741695958864 36.0 36.0 36.0 32.0 36.0 45 34.44179750783165 36.0 36.0 36.0 32.0 36.0 46 34.42207406337311 36.0 36.0 36.0 32.0 36.0 47 34.39218904497229 36.0 36.0 36.0 32.0 36.0 48 34.34980008874154 36.0 36.0 36.0 32.0 36.0 49 34.33471038512735 36.0 36.0 36.0 32.0 36.0 50 33.75256952887469 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 1.0 20 13.0 21 31.0 22 149.0 23 477.0 24 1194.0 25 2689.0 26 5645.0 27 10334.0 28 17257.0 29 26384.0 30 38367.0 31 54950.0 32 80036.0 33 129518.0 34 276056.0 35 1004378.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.3645858310544 18.16200105018105 12.280258720903763 26.193154397860784 2 15.957571435074888 20.376879770557977 36.86423162718706 26.801317167180077 3 17.821564623703168 24.15664932296434 29.23162461850734 28.79016143482515 4 12.369065257808739 16.165163665013434 35.82275000440065 35.64302107277717 5 14.292607926889596 36.92619216852881 33.39334414175338 15.38785576282822 6 34.24843123472662 35.692399394466925 16.66569548290292 13.393473887903543 7 30.230127364294173 30.75820693313845 20.702479363925125 18.309186338642252 8 28.35514140089191 32.77522809091952 19.25651252610807 19.6131179820805 9 27.52961214374075 14.012307386009788 18.399772741895738 40.058307728353725 10 15.938292887232466 26.903839850436427 31.618734294004103 25.539132968327 11 37.03480467137689 21.121288270570812 22.534598295578704 19.309308762473595 12 24.635048237366448 23.681287398071476 28.73992854532807 22.943735819234004 13 29.54494550138303 19.519470121816866 25.283570656393156 25.652013720406952 14 23.758239103502987 19.312051929038248 25.43467928878001 31.49502967867876 15 25.20684032958481 27.134780375936472 22.20490880815051 25.453470486328207 16 25.75019529934063 25.92100255482494 23.614740411212093 24.71406173462234 17 24.090778588645332 26.035080222472974 25.18414476403673 24.68999642484496 18 24.85532431996057 25.121003133274012 25.93825228622173 24.085420260543692 19 25.64254155283126 24.933094827800744 25.476834027220953 23.947529592147042 20 25.981229445806125 24.295497227877345 24.979999684365275 24.743273641951255 21 26.77645447807896 24.179338031819487 24.66177151663661 24.382435973464943 22 25.948328293306496 24.11619457133874 25.04537238130039 24.89010475405438 23 24.6767152423361 24.01715606532222 25.54374481020526 25.762383882136426 24 24.911242854966364 24.832455524309047 25.2715522500217 24.98474937070289 25 25.126664914471213 24.35687244037325 25.375229823904355 25.141232821251176 26 24.90900791309436 25.13190513999063 25.48616119014493 24.472925756770078 27 25.32216326661928 24.74075485968924 24.87132590618188 25.065755967509602 28 24.7587419251842 24.677766136580782 25.696944165554818 24.8665477726802 29 24.807747288066764 24.829174459054983 25.441275286945025 24.921802965933225 30 24.766664886100415 24.98015073302675 25.62922783316418 24.62395654770865 31 25.243083841313506 24.678791822621942 24.895136137877614 25.182988198186933 32 25.099989255973103 24.783131513566307 24.657845233810058 25.459033996650533 33 24.809578267763186 24.502244754752347 25.08571102515728 25.602465952327186 34 25.336752811205365 24.562028620422783 25.353263426256127 24.747955142115728 35 25.763140882644837 24.468400877728104 25.21204174975037 24.556416489876685 36 24.941815643305915 24.95523112878259 24.94661122408717 25.15634200382432 37 25.575737415541617 24.76494908064725 24.98626631273715 24.673047191073984 38 24.989695703032286 24.71258751064575 25.231899796706386 25.065816989615573 39 25.428034483135388 24.657372099545107 24.71163896871096 25.202954448608544 40 25.586453213033995 24.667333557518727 25.230326214030686 24.51588701541659 41 24.6590459356236 25.127774311111327 25.36304900463508 24.850130748629994 42 25.65727136704796 25.119593554907414 24.931849428360714 24.291285649683907 43 25.26480253773398 24.36978513512365 25.14716647627187 25.218245850870495 44 24.874913427284078 24.863077017394666 24.906780684678647 25.35522887064261 45 24.916629134096286 25.004886315766473 25.017572526886877 25.060912023250363 46 24.87656861352592 24.802819346466165 25.027466290818552 25.293145749189367 47 25.078591203733776 24.716941161759788 25.260751622660244 24.943716011846192 48 25.785414123584243 25.173435439040986 24.390464495584975 24.650685941789792 49 25.019909242987453 25.24516290373881 24.603636107597318 25.131291745676414 50 25.00696524660615 25.36885457354178 24.64999256433369 24.974187615518385 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 24.0 1 27.0 2 30.0 3 113.5 4 197.0 5 225.5 6 254.0 7 241.0 8 228.0 9 314.0 10 400.0 11 651.5 12 903.0 13 1701.0 14 2499.0 15 3309.5 16 4120.0 17 4364.0 18 4608.0 19 4503.5 20 4399.0 21 4861.5 22 5324.0 23 6322.0 24 7320.0 25 8450.5 26 9581.0 27 11507.5 28 13434.0 29 15874.0 30 18314.0 31 21223.5 32 24133.0 33 27705.0 34 31277.0 35 36755.5 36 42234.0 37 49705.5 38 57177.0 39 63584.5 40 69992.0 41 77022.5 42 84053.0 43 87783.5 44 91514.0 45 100919.5 46 110325.0 47 117273.5 48 124222.0 49 128539.5 50 132857.0 51 130774.5 52 128692.0 53 126677.5 54 124663.0 55 123883.0 56 123103.0 57 118395.5 58 113688.0 59 103767.0 60 93846.0 61 81691.5 62 69537.0 63 59952.5 64 50368.0 65 42397.5 66 34427.0 67 29267.5 68 24108.0 69 21271.5 70 18435.0 71 14181.5 72 9928.0 73 8428.0 74 6928.0 75 5407.5 76 3887.0 77 3264.5 78 2642.0 79 2128.5 80 1615.0 81 1295.0 82 975.0 83 797.0 84 619.0 85 451.0 86 283.0 87 192.0 88 101.0 89 86.5 90 72.0 91 58.0 92 44.0 93 41.5 94 39.0 95 36.0 96 33.0 97 25.5 98 18.0 99 14.5 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008862014190148475 2 3.6419236397870443E-4 3 3.034936366489204E-4 4 0.0 5 0.0 6 4.2489109130848854E-4 7 1.2139745465956816E-4 8 1.2139745465956816E-4 9 9.104809099467611E-4 10 0.0012746732739254657 11 6.069872732978408E-5 12 1.8209618198935222E-4 13 4.8558981863827265E-4 14 1.2139745465956816E-4 15 0.004552404549733806 16 6.069872732978408E-4 17 0.0 18 1.8209618198935222E-4 19 0.0 20 4.2489109130848854E-4 21 0.0 22 1.8209618198935222E-4 23 0.0010318783646063292 24 4.8558981863827265E-4 25 0.0014567694559148177 26 0.0051593918230316465 27 0.006191270187637976 28 0.004552404549733806 29 0.002427949093191363 30 0.003945417276435965 31 0.0064947638242868954 32 0.0032777312758083404 33 0.0051593918230316465 34 0.0033991287304679083 35 0.0027921414571700676 36 0.007951533280201714 37 0.004370308367744454 38 0.006676860006276248 39 0.004066814731095533 40 0.0021244554565424427 41 0.0027314427298402834 42 0.001578166910574386 43 0.0016388656379041702 44 0.0013353720012552496 45 0.0013960707285850338 46 4.2489109130848854E-4 47 0.0019423592745530906 48 0.0023065516385317947 49 3.034936366489204E-4 50 9.711796372765453E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1647481.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.85137231330813 #Duplication Level Percentage of deduplicated Percentage of total 1 78.63956336488747 44.707670954132034 2 12.455815371213639 14.162603942693858 3 3.782729762412744 6.451601342506755 4 1.6135876312799602 3.6693868474418396 5 0.889369048586006 2.5280925452547827 6 0.5502426542203318 1.8769229998645771 7 0.3757143553727881 1.4951913690527057 8 0.2656689117610039 1.2082913771676989 9 0.2035813355190126 1.0416490471468698 >10 1.0967763824530248 10.889158379208677 >50 0.06730665091745014 2.658793739742702 >100 0.0524314484858029 6.154477982010097 >500 0.006028845401270242 2.33748107245005 >1k 0.0011842374895352263 0.818678401327325 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.0698727329784075E-5 2 0.0 0.0 0.0 0.0 6.0698727329784075E-5 3 0.0 0.0 0.0 0.0 6.0698727329784075E-5 4 0.0 0.0 0.0 0.0 1.2139745465956815E-4 5 0.0 0.0 0.0 6.0698727329784075E-5 1.2139745465956815E-4 6 0.0 0.0 0.0 6.0698727329784075E-5 3.6419236397870443E-4 7 0.0 0.0 0.0 6.0698727329784075E-5 3.6419236397870443E-4 8 0.0 0.0 0.0 6.0698727329784075E-5 3.6419236397870443E-4 9 0.0 0.0 0.0 6.0698727329784075E-5 3.6419236397870443E-4 10 0.0 0.0 0.0 6.0698727329784075E-5 3.6419236397870443E-4 11 0.0 0.0 0.0 6.0698727329784075E-5 3.6419236397870443E-4 12 0.0 0.0 0.0 6.0698727329784075E-5 4.2489109130848854E-4 13 0.0 0.0 0.0 6.0698727329784075E-5 4.2489109130848854E-4 14 0.0 0.0 0.0 6.0698727329784075E-5 5.462885459680567E-4 15 0.0 0.0 0.0 6.0698727329784075E-5 6.676860006276248E-4 16 0.0 0.0 0.0 6.0698727329784075E-5 7.283847279574089E-4 17 0.0 0.0 0.0 6.0698727329784075E-5 7.283847279574089E-4 18 0.0 0.0 0.0 6.0698727329784075E-5 7.89083455287193E-4 19 0.0 0.0 0.0 6.0698727329784075E-5 8.497821826169771E-4 20 0.0 0.0 0.0 1.2139745465956815E-4 9.104809099467611E-4 21 0.0 0.0 0.0 1.2139745465956815E-4 9.104809099467611E-4 22 0.0 0.0 0.0 2.427949093191363E-4 9.104809099467611E-4 23 0.0 0.0 0.0 4.855898186382726E-4 9.104809099467611E-4 24 0.0 0.0 0.0 8.497821826169771E-4 9.104809099467611E-4 25 0.0 0.0 0.0 0.0012139745465956815 9.104809099467611E-4 26 0.0 0.0 0.0 0.001578166910574386 9.104809099467611E-4 27 0.0 0.0 0.0 0.0020030580018828743 9.104809099467611E-4 28 0.0 0.0 0.0 0.0027921414571700676 9.104809099467611E-4 29 0.0 0.0 0.0 0.005462885459680567 9.104809099467611E-4 30 0.0 0.0 0.0 0.01044018110072286 9.104809099467611E-4 31 0.0 0.0 0.0 0.022701324021339245 9.104809099467611E-4 32 0.0 0.0 0.0 0.03720831985315764 9.711796372765452E-4 33 0.0 0.0 0.0 0.05329348259555042 9.711796372765452E-4 34 0.0 0.0 0.0 0.06986423515658147 9.711796372765452E-4 35 0.0 0.0 0.0 0.09286905281456964 9.711796372765452E-4 36 0.0 0.0 0.0 0.12346121138878081 9.711796372765452E-4 37 0.0 0.0 0.0 0.16607171797428924 0.0010318783646063292 38 0.0 0.0 0.0 0.2256778682121372 0.0010925770919361134 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2760 0.0 22.317654 1 TAGACCG 55 0.0044872444 19.997723 5 TATACTA 90 1.0033067E-5 19.55333 5 ATACCGT 370 0.0 18.430334 6 CTAGACA 205 0.0 18.241825 4 ACCGTCG 340 0.0 18.115585 8 TACCGTC 375 0.0 17.597998 7 GTATTAG 340 0.0 17.46966 1 GGTATCA 1425 0.0 16.981554 1 AACGCAG 3700 0.0 16.825113 6 CGTCGTA 390 0.0 16.359098 10 CCGTCGT 380 0.0 16.210157 9 TCAACGC 3925 0.0 15.580393 4 ATCAACG 3955 0.0 15.5183 3 GTATTAA 300 0.0 15.399182 1 TCTAGAC 200 1.2787496E-9 15.398714 3 TATCAAC 4010 0.0 15.360314 2 CAACGCA 4095 0.0 15.094741 5 AATAGCG 350 0.0 15.083997 5 TAGCGTA 355 0.0 14.871548 7 >>END_MODULE