##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064194_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 764339 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.2293759706099 32.0 32.0 32.0 32.0 32.0 2 31.420657587798086 32.0 32.0 32.0 32.0 32.0 3 31.487483956726006 32.0 32.0 32.0 32.0 32.0 4 31.57008212324636 32.0 32.0 32.0 32.0 32.0 5 31.51281041527385 32.0 32.0 32.0 32.0 32.0 6 35.08928760667714 36.0 36.0 36.0 36.0 36.0 7 35.11343788554555 36.0 36.0 36.0 36.0 36.0 8 35.073578608444684 36.0 36.0 36.0 36.0 36.0 9 35.170925466317954 36.0 36.0 36.0 36.0 36.0 10 35.02642806398732 36.0 36.0 36.0 36.0 36.0 11 35.171348053677754 36.0 36.0 36.0 36.0 36.0 12 35.07652494508327 36.0 36.0 36.0 36.0 36.0 13 35.1177108586635 36.0 36.0 36.0 36.0 36.0 14 35.05656783181285 36.0 36.0 36.0 36.0 36.0 15 35.03829975966162 36.0 36.0 36.0 36.0 36.0 16 35.03649820302248 36.0 36.0 36.0 36.0 36.0 17 34.99655650176165 36.0 36.0 36.0 36.0 36.0 18 34.99405368560286 36.0 36.0 36.0 36.0 36.0 19 34.99297824656337 36.0 36.0 36.0 36.0 36.0 20 34.979424051369875 36.0 36.0 36.0 36.0 36.0 21 34.97360071905267 36.0 36.0 36.0 36.0 36.0 22 34.96782186961545 36.0 36.0 36.0 36.0 36.0 23 34.91985885843847 36.0 36.0 36.0 32.0 36.0 24 34.88498166389521 36.0 36.0 36.0 32.0 36.0 25 34.85092347767156 36.0 36.0 36.0 32.0 36.0 26 34.79960593401619 36.0 36.0 36.0 32.0 36.0 27 34.79820341497686 36.0 36.0 36.0 32.0 36.0 28 34.76349630203352 36.0 36.0 36.0 32.0 36.0 29 34.73127368876899 36.0 36.0 36.0 32.0 36.0 30 34.70253251502278 36.0 36.0 36.0 32.0 36.0 31 34.68535558175103 36.0 36.0 36.0 32.0 36.0 32 34.63410476241563 36.0 36.0 36.0 32.0 36.0 33 34.592777550275464 36.0 36.0 36.0 32.0 36.0 34 34.56950253748664 36.0 36.0 36.0 32.0 36.0 35 34.51364904839345 36.0 36.0 36.0 32.0 36.0 36 34.47835580809039 36.0 36.0 36.0 32.0 36.0 37 34.45551777418135 36.0 36.0 36.0 32.0 36.0 38 34.39299316141136 36.0 36.0 36.0 32.0 36.0 39 34.3910489978923 36.0 36.0 36.0 32.0 36.0 40 34.35148932607129 36.0 36.0 36.0 32.0 36.0 41 34.32084978000599 36.0 36.0 36.0 32.0 36.0 42 34.22760843029075 36.0 36.0 36.0 32.0 36.0 43 34.21483137717688 36.0 36.0 36.0 32.0 36.0 44 34.117381162023655 36.0 36.0 36.0 32.0 36.0 45 34.074994210684004 36.0 36.0 36.0 32.0 36.0 46 34.02073425535005 36.0 36.0 36.0 32.0 36.0 47 33.95618697986103 36.0 36.0 36.0 32.0 36.0 48 33.88080158149722 36.0 36.0 36.0 32.0 36.0 49 33.8477141687131 36.0 36.0 36.0 32.0 36.0 50 33.248324369160805 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 6.0 20 7.0 21 26.0 22 108.0 23 291.0 24 703.0 25 1593.0 26 3480.0 27 6207.0 28 10245.0 29 14958.0 30 21155.0 31 29129.0 32 41613.0 33 65147.0 34 131645.0 35 438025.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.481190621675765 18.60539362243596 12.415982247181308 25.49743350870697 2 15.531409656760452 21.226425585639806 37.237860362275704 26.00430439532404 3 17.772896284104675 25.841577940649294 29.091056574447432 27.2944692007986 4 12.08272769020029 16.508643416075852 36.08320391868006 35.325424975043795 5 13.898283353328825 37.521963421989454 33.024744256148125 15.555008968533595 6 32.9123579158904 36.35129053191267 17.13291013376316 13.603441418433778 7 29.236749283037827 31.178957945196878 21.32491469720123 18.25937807456407 8 28.28901835442127 32.42265539243713 19.664049590561255 19.624276662580346 9 28.044111951936866 13.690588333804335 19.029788258444018 39.23551145581478 10 16.41232559843418 26.842402738091497 30.974921761338063 25.770349902136257 11 36.64682817440952 21.211137989818653 23.08295141292018 19.05908242285164 12 25.238408611885564 24.030567588465328 28.897779650129067 21.83324414952004 13 29.761713184471127 19.605118724740983 25.623584546485752 25.00958354430214 14 23.974833156492082 20.163827830321363 25.69056400366853 30.17077500951803 15 24.915282179033944 27.509152141431002 23.101470361192302 24.47409531834275 16 25.01596165017296 25.660445984205815 24.79262938094964 24.530962984671582 17 23.362670228785916 25.979571891529808 25.828460931602336 24.82929694808194 18 24.3263433882481 24.539992882711267 27.65105922002889 23.482604509011743 19 25.571768547725547 24.323369604324782 26.4508287553036 23.654033092646067 20 25.947130512144547 23.760523854069223 25.889694963595804 24.402650670190425 21 27.14162171497202 23.6710412526379 25.16004024392318 24.0272967884669 22 26.079072451026185 24.021995533383837 25.728441773720228 24.170490241869754 23 24.062255506100737 24.038705592057923 26.62448615395887 25.274552747882474 24 24.770258106382535 24.70955182014193 26.456035042180403 24.064155031295137 25 24.65230440732784 24.322991215698178 26.475236747008445 24.549467629965537 26 24.158824945570256 25.51459659186066 26.87978877072517 23.44678969184391 27 24.780934461557383 24.943181000406923 25.929221255866718 24.346663282168972 28 23.882395579694123 24.967584336332628 26.64652599598844 24.503494087984812 29 24.11040095249933 24.6854331713125 26.493219329979524 24.71094654620865 30 23.762851662571403 25.126848428230875 26.834035938861543 24.276263970336178 31 24.64639274807462 24.915801566470314 25.574472762101152 24.863332923353912 32 24.367847974732236 25.124886496557608 25.4357616309954 25.071503897714752 33 23.794763767679807 24.79896374412854 26.316712242735086 25.089560245456568 34 24.832558985423244 24.74895296212608 26.411783869925255 24.006704182525425 35 25.32284358800579 24.774630970480256 26.160863114318683 23.74166232719527 36 24.036296310834594 25.569010748889454 25.809110714215617 24.585582226060332 37 25.156581800007068 25.4474373182153 25.341719253117574 24.05426162866006 38 24.26864468653584 25.381607974187 25.97184749812238 24.377899841154782 39 25.064569055525464 24.92744976435893 25.46846910498261 24.539512075132997 40 25.34736941265131 25.294511694116046 25.78187555932363 23.576243333909012 41 24.01305761443403 25.656511471205867 26.370885968297998 23.95954494606211 42 25.4815070670754 26.19102756833207 25.489749698751435 22.837715665841095 43 24.42685171738422 25.176657756914217 25.736101244094513 24.660389281607053 44 23.987900466685073 25.889050105517665 25.151538543058145 24.971510884739125 45 24.25381872894384 26.087462793968534 25.177509567265233 24.481208909822392 46 24.12766736880667 25.600853034683972 25.176036528724506 25.095443067784856 47 24.624275339090936 25.517222430830945 25.5025689400947 24.355933289983422 48 25.23625544764569 26.126719009421436 24.31033557889944 24.326689964033434 49 24.41995253383992 26.32003809852761 24.570541150858134 24.689468216774344 50 24.508294203150736 26.636697024448896 24.435419825755663 24.419588946644705 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 357.0 1 208.0 2 59.0 3 172.0 4 285.0 5 305.0 6 325.0 7 296.0 8 267.0 9 400.0 10 533.0 11 821.5 12 1110.0 13 1887.0 14 2664.0 15 3599.5 16 4535.0 17 4737.0 18 4939.0 19 4871.0 20 4803.0 21 4997.0 22 5191.0 23 5544.5 24 5898.0 25 5711.0 26 5524.0 27 6631.5 28 7739.0 29 8986.0 30 10233.0 31 11816.0 32 13399.0 33 15807.5 34 18216.0 35 20619.5 36 23023.0 37 26385.5 38 29748.0 39 31274.0 40 32800.0 41 35253.0 42 37706.0 43 37877.5 44 38049.0 45 42416.5 46 46784.0 47 49875.5 48 52967.0 49 54970.5 50 56974.0 51 54683.5 52 52393.0 53 51924.0 54 51455.0 55 52756.0 56 54057.0 57 52641.0 58 51225.0 59 46624.0 60 42023.0 61 37344.0 62 32665.0 63 28183.0 64 23701.0 65 19944.0 66 16187.0 67 13915.5 68 11644.0 69 10645.0 70 9646.0 71 7406.0 72 5166.0 73 4430.0 74 3694.0 75 2891.0 76 2088.0 77 1876.5 78 1665.0 79 1394.0 80 1123.0 81 856.0 82 589.0 83 529.0 84 469.0 85 336.0 86 203.0 87 144.0 88 85.0 89 69.0 90 53.0 91 43.0 92 33.0 93 25.0 94 17.0 95 15.5 96 14.0 97 10.0 98 6.0 99 8.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008634911995855242 2 5.233279997488025E-4 3 1.3083199993720062E-4 4 0.0 5 0.0 6 3.924959998116019E-4 7 3.924959998116019E-4 8 0.0 9 0.001439151999309207 10 0.001439151999309207 11 0.0 12 0.0 13 0.001046655999497605 14 0.0 15 0.004840783997676424 16 9.158239995604046E-4 17 0.0 18 3.924959998116019E-4 19 0.0 20 5.233279997488025E-4 21 0.0 22 2.6166399987440124E-4 23 6.541599996860032E-4 24 3.924959998116019E-4 25 0.0027474719986812137 26 0.006672431996797233 27 0.009158239995604044 28 0.006279935996985631 29 0.004448287997864822 30 0.005364111997425226 31 0.009550735995415647 32 0.005887439997174029 33 0.006410767996922832 34 0.005233279997488026 35 0.004840783997676424 36 0.009681567995352847 37 0.005494943997362427 38 0.009550735995415647 39 0.005364111997425226 40 0.003009135998555615 41 0.004448287997864822 42 0.002616639998744013 43 0.001046655999497605 44 0.0015699839992464077 45 0.0018316479991208091 46 0.0011774879994348058 47 0.00209331199899521 48 0.0023549759988696116 49 6.541599996860032E-4 50 0.0013083199993720064 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 764339.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.543303775176014 #Duplication Level Percentage of deduplicated Percentage of total 1 77.5030705734063 43.04776592367611 2 13.671358257156593 15.187048093930189 3 4.217470347048256 7.02756709946695 4 1.7225934957663467 3.827141352659703 5 0.856896127980275 2.379742097009026 6 0.47988294029127204 1.5992570357473666 7 0.28555817837341085 1.1102591252816179 8 0.19989022517806104 0.8882050799002703 9 0.13243609579550403 0.662034446961119 >10 0.7454040148918197 7.63996881290213 >50 0.08573360219349413 3.4076672429571153 >100 0.09189069611571786 10.092987657435604 >500 0.007104950729978953 2.6845529227441216 >1k 7.104950729978953E-4 0.4458031093286862 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1182 0.15464342392577116 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1148 0.15019513592790634 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1059 0.1385510879334955 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 952 0.12455206394021501 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 931 0.1218045919415338 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 875 0.11447799994505055 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 860 0.11251551994599254 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 816 0.10675891194875572 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGG 797 0.1042731039499489 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 785 0.10270311995070251 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA 776 0.1015256319512677 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 770 0.10074063995164448 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 3.924959998116019E-4 0.0 17 0.0 0.0 0.0 3.924959998116019E-4 0.0 18 0.0 0.0 0.0 5.233279997488026E-4 1.3083199993720065E-4 19 0.0 0.0 0.0 5.233279997488026E-4 1.3083199993720065E-4 20 0.0 0.0 0.0 5.233279997488026E-4 1.3083199993720065E-4 21 0.0 0.0 0.0 7.849919996232038E-4 1.3083199993720065E-4 22 0.0 0.0 0.0 0.001439151999309207 1.3083199993720065E-4 23 0.0 0.0 0.0 0.0034016319983672166 1.3083199993720065E-4 24 0.0 0.0 0.0 0.006279935996985631 2.616639998744013E-4 25 0.0 0.0 0.0 0.008111583996106439 2.616639998744013E-4 26 0.0 0.0 0.0 0.008896575995729643 2.616639998744013E-4 27 0.0 0.0 0.0 0.01020489599510165 2.616639998744013E-4 28 0.0 0.0 0.0 0.015569007992526876 2.616639998744013E-4 29 0.0 0.0 0.0 0.025250575987879723 2.616639998744013E-4 30 0.0 0.0 0.0 0.04343622397915061 2.616639998744013E-4 31 0.0 0.0 0.0 0.07679838396313678 2.616639998744013E-4 32 0.0 0.0 0.0 0.11330051194561576 2.616639998744013E-4 33 0.0 0.0 0.0 0.14875598392859712 2.616639998744013E-4 34 0.0 0.0 0.0 0.1838189599117669 3.924959998116019E-4 35 0.0 0.0 0.0 0.22607769589148272 3.924959998116019E-4 36 0.0 0.0 0.0 0.2781488318664886 3.924959998116019E-4 37 0.0 0.0 0.0 0.3590030078276786 3.924959998116019E-4 38 0.0 0.0 0.0 0.46157529577844386 5.233279997488026E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAACGG 55 4.950236E-6 28.005579 35 TAACGGC 60 9.731788E-6 25.671783 36 CGTCTTA 60 2.8713804E-4 22.000067 15 GTATAGA 50 0.0025824748 21.995749 1 GTACTAC 70 3.2181575E-5 21.995747 1 GTATATA 120 5.984475E-10 21.995747 1 TCACGTC 105 7.736526E-8 20.952444 42 GGCCGCG 85 6.1084284E-6 20.705944 40 ACTTCGC 65 4.936311E-4 20.303766 8 TAGGACG 290 0.0 19.720325 4 TCTAGAC 80 8.996405E-5 19.246279 3 TAGGACC 540 0.0 19.144447 4 ATGCGGC 305 0.0 18.757837 35 TAAGGCC 130 3.5901394E-8 18.611786 4 CGCCTCG 95 1.596716E-5 18.525158 11 TGCGGCG 310 0.0 18.45529 36 GTCCTAA 180 1.4551915E-11 18.32979 1 GTAATGG 60 0.007417936 18.32979 1 TTAGGAC 265 0.0 18.26062 3 CGGCGTT 315 0.0 18.158783 41 >>END_MODULE