FastQCFastQC Report
Thu 2 Feb 2017
SRR4064192_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4064192_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1441713
Sequences flagged as poor quality0
Sequence length50
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATCAA32150.020.938491
GTATAGG1605.2750693E-1119.249211
GTCTATA1303.5903213E-818.6146221
GTATTAC1557.221388E-1018.4508571
CGCAATA3650.018.0839636
ATACGAA3650.018.08145140
TACGAAT3600.017.72149541
CGAGCCG3650.017.47994815
AACGCAG38700.017.4508746
AATACGA3950.017.26571539
TAGCGGC3750.017.01440630
CAATACG4050.016.29732538
CGAATGC4000.015.94879343
CTAGCGG4150.015.90406729
CTAGACA2101.5097612E-1015.7130984
CGCTAGA4650.015.61388937
CGTATTG4950.015.55653727
TCTAGCG4250.015.52985228
ATACCGT3400.015.5282366
GGGTATA1158.222158E-515.303721
Produced by FastQC (version 0.11.5)