##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064190_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 637867 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.2308302514474 32.0 32.0 32.0 32.0 32.0 2 31.39985294740126 32.0 32.0 32.0 32.0 32.0 3 31.469093086803362 32.0 32.0 32.0 32.0 32.0 4 31.55243334425515 32.0 32.0 32.0 32.0 32.0 5 31.49092052104906 32.0 32.0 32.0 32.0 32.0 6 35.06673021178396 36.0 36.0 36.0 36.0 36.0 7 35.08616843323138 36.0 36.0 36.0 36.0 36.0 8 35.04749109140307 36.0 36.0 36.0 36.0 36.0 9 35.148653245896085 36.0 36.0 36.0 36.0 36.0 10 35.0105648983252 36.0 36.0 36.0 36.0 36.0 11 35.1391355878263 36.0 36.0 36.0 36.0 36.0 12 35.043772447861386 36.0 36.0 36.0 36.0 36.0 13 35.087675016892234 36.0 36.0 36.0 36.0 36.0 14 35.03809728360301 36.0 36.0 36.0 36.0 36.0 15 35.012113810559256 36.0 36.0 36.0 36.0 36.0 16 35.023417107328015 36.0 36.0 36.0 36.0 36.0 17 34.98075147326951 36.0 36.0 36.0 36.0 36.0 18 34.9762489672612 36.0 36.0 36.0 36.0 36.0 19 34.9703935146355 36.0 36.0 36.0 36.0 36.0 20 34.9722089401082 36.0 36.0 36.0 36.0 36.0 21 34.953861855214335 36.0 36.0 36.0 36.0 36.0 22 34.943605798700986 36.0 36.0 36.0 36.0 36.0 23 34.89375528127337 36.0 36.0 36.0 32.0 36.0 24 34.87269916769483 36.0 36.0 36.0 32.0 36.0 25 34.852129048845605 36.0 36.0 36.0 32.0 36.0 26 34.78607609423281 36.0 36.0 36.0 32.0 36.0 27 34.78843552025736 36.0 36.0 36.0 32.0 36.0 28 34.757857045434235 36.0 36.0 36.0 32.0 36.0 29 34.71446712245656 36.0 36.0 36.0 32.0 36.0 30 34.68964846903822 36.0 36.0 36.0 32.0 36.0 31 34.679240343206345 36.0 36.0 36.0 32.0 36.0 32 34.6247493599763 36.0 36.0 36.0 32.0 36.0 33 34.57999081313189 36.0 36.0 36.0 32.0 36.0 34 34.560134009127296 36.0 36.0 36.0 32.0 36.0 35 34.500187343129525 36.0 36.0 36.0 32.0 36.0 36 34.476384575467925 36.0 36.0 36.0 32.0 36.0 37 34.447659151515914 36.0 36.0 36.0 32.0 36.0 38 34.40067443526629 36.0 36.0 36.0 32.0 36.0 39 34.38537343991773 36.0 36.0 36.0 32.0 36.0 40 34.35390136188265 36.0 36.0 36.0 32.0 36.0 41 34.331669454604175 36.0 36.0 36.0 32.0 36.0 42 34.24720984155004 36.0 36.0 36.0 32.0 36.0 43 34.22723545817545 36.0 36.0 36.0 32.0 36.0 44 34.146634016182055 36.0 36.0 36.0 32.0 36.0 45 34.11087891362933 36.0 36.0 36.0 32.0 36.0 46 34.04182533349429 36.0 36.0 36.0 32.0 36.0 47 33.995930186073274 36.0 36.0 36.0 32.0 36.0 48 33.93522160575794 36.0 36.0 36.0 32.0 36.0 49 33.87261921372324 36.0 36.0 36.0 32.0 36.0 50 33.30989061983141 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 2.0 20 9.0 21 34.0 22 88.0 23 223.0 24 613.0 25 1446.0 26 2875.0 27 5219.0 28 8435.0 29 12944.0 30 17548.0 31 24592.0 32 34759.0 33 54119.0 34 109887.0 35 365072.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.71981963195763 19.1857411411289 12.758561759278278 25.335877467635193 2 15.209849136883625 21.605893428526187 37.91362722089226 25.270630213697924 3 17.772726203820557 26.062097779310665 29.497777742939334 26.66739827392944 4 12.119924686494207 16.94679298349029 36.77663211923489 34.15665021078061 5 13.617101997751883 37.78812824617044 33.37749091895332 15.217278837124354 6 32.27381256594243 36.6286388855357 17.552718670193002 13.544829878328867 7 28.551563256917195 31.483522427089035 21.77303419051307 18.191880125480704 8 27.433775379507015 33.33030239846237 20.181166293286847 19.054755928743766 9 27.75348629390692 14.185355605897893 19.424007023539833 38.63715107665535 10 15.89815224173557 27.412072355115747 31.988197926171193 24.70157747697749 11 35.95802253137806 21.710202456315276 23.46731131616985 18.864463696136806 12 24.7214932289854 24.38129638513418 29.52171772754779 21.37549265833263 13 29.454711349127717 20.457182095242874 25.802992487426785 24.285114068202628 14 23.450029551614993 20.382148629730022 26.34263882596215 29.825182992692834 15 24.299929918520483 28.15503841938827 23.54627964548492 23.998752016606332 16 24.207311624319406 26.321251808779657 25.458211114960783 24.01322545194016 17 23.023921914756524 26.497059731887685 26.26143067441959 24.217587678936205 18 23.624084055271798 25.329144365744526 28.10402184784892 22.94274973113475 19 24.934665063406637 24.972290461804732 26.9518567350247 23.141187739763932 20 25.51155105163483 24.520901007111235 26.536377660441723 23.43117028081221 21 26.276637606272153 24.38799937918093 25.796286686723096 23.539076327823825 22 25.33400432065669 24.95398720107358 26.135583335684924 23.576425142584807 23 23.46447977775757 24.863214927366734 27.053030279276708 24.619275015598983 24 24.146764367437676 25.302493000097197 26.90753230302289 23.643210329442237 25 24.08897933075804 25.10707745948929 26.93397882907741 23.869964380675263 26 23.531551419218083 25.88175900259636 27.302388149560375 23.284301428625184 27 24.20499602556806 25.451572291546142 26.503111345239383 23.840320337646414 28 23.410139549322007 25.573224591158585 27.013713491962704 24.002922367556703 29 23.663548881704987 25.325862355490198 26.87623658375219 24.134352179052623 30 23.494652146510177 25.535334087980104 27.194720817276185 23.77529294823353 31 24.14345115648989 25.33615975114144 26.377408308664897 24.142980783703777 32 23.788687149305236 25.802511911275694 26.112463764480488 24.296337174938582 33 23.329581050869034 25.247321403374546 26.932085777804254 24.491011767952166 34 24.139752916091812 25.502320331117524 26.863633513106734 23.494293239683934 35 24.530567771166975 25.49145952386552 26.720441486568053 23.257531218399453 36 23.54836433762141 26.030118451275058 26.468490079411744 23.953027131691794 37 24.358612558714153 25.97768078314802 26.084604820047787 23.57910183809004 38 23.716562741553375 25.88966116284284 26.45645414934799 23.937321946255796 39 24.429006829341713 25.473475940523898 26.04509623163321 24.05242099850118 40 24.75315513051658 25.759347809046012 26.406051579524963 23.08144548091244 41 23.714180000689826 25.89575474804105 26.82106226933943 23.569002981929692 42 24.48118273248203 26.557392469957435 26.193981296396462 22.767443501164074 43 23.76362578838698 25.758442776000113 26.45766344283087 24.020267992782035 44 23.405512860309727 26.24095796216689 26.029781109783745 24.32374806773964 45 23.73866119833065 26.340353748663485 25.90718252139204 24.013802531613816 46 23.42045317367372 25.930576916142645 26.082021518929793 24.56694839125384 47 24.07120852244668 25.787299422273435 26.035165283101698 24.106326772178193 48 24.158657991690834 26.397899192600143 25.361762169789138 24.081680645919885 49 23.880049477709164 26.339511776039682 25.498108528006796 24.282330218244358 50 23.610584173907046 27.06417415788467 25.32130975859831 24.003931909609978 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 286.0 1 172.5 2 59.0 3 180.5 4 302.0 5 283.5 6 265.0 7 258.0 8 251.0 9 363.0 10 475.0 11 723.5 12 972.0 13 1633.5 14 2295.0 15 2964.5 16 3634.0 17 3760.5 18 3887.0 19 3871.0 20 3855.0 21 4077.0 22 4299.0 23 4733.0 24 5167.0 25 5291.0 26 5415.0 27 6332.5 28 7250.0 29 8635.5 30 10021.0 31 11816.0 32 13611.0 33 15980.5 34 18350.0 35 21045.5 36 23741.0 37 26076.0 38 28411.0 39 29503.0 40 30595.0 41 32387.5 42 34180.0 43 34612.5 44 35045.0 45 38039.0 46 41033.0 47 43146.0 48 45259.0 49 46212.0 50 47165.0 51 45415.0 52 43665.0 53 42704.0 54 41743.0 55 41451.0 56 41159.0 57 39352.0 58 37545.0 59 34255.5 60 30966.0 61 27039.5 62 23113.0 63 19905.5 64 16698.0 65 14170.5 66 11643.0 67 9981.0 68 8319.0 69 7371.5 70 6424.0 71 5049.0 72 3674.0 73 3173.0 74 2672.0 75 2103.5 76 1535.0 77 1369.0 78 1203.0 79 965.0 80 727.0 81 574.0 82 421.0 83 354.0 84 287.0 85 206.5 86 126.0 87 90.0 88 54.0 89 38.0 90 22.0 91 20.0 92 18.0 93 12.5 94 7.0 95 11.0 96 15.0 97 10.0 98 5.0 99 4.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009406349599524666 2 6.270899733016444E-4 3 3.135449866508222E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0018812699199049331 10 0.0020380424132303444 11 1.567724933254111E-4 12 1.567724933254111E-4 13 4.703174799762333E-4 14 0.0 15 0.005957354746365622 16 9.406349599524666E-4 17 0.0 18 1.567724933254111E-4 19 0.0 20 4.703174799762333E-4 21 0.0 22 1.567724933254111E-4 23 7.838624666270555E-4 24 1.567724933254111E-4 25 0.0017244974265795219 26 0.007995397159595966 27 0.006270899733016444 28 0.00438962981311151 29 0.0032922223598336334 30 0.006427672226341856 31 0.011757936999405832 32 0.004076084826460689 33 0.0051734922797385665 34 0.004232857319786099 35 0.0034489948531590438 36 0.008152169652921377 37 0.004859947293087744 38 0.010660529546127956 39 0.004859947293087744 40 0.002665132386531989 41 0.0039193123331352775 42 0.0034489948531590438 43 0.002194814906555755 44 0.0020380424132303444 45 0.0020380424132303444 46 0.001567724933254111 47 0.0034489948531590438 48 0.002665132386531989 49 6.270899733016444E-4 50 0.0014109524399286998 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 637867.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.15079388102428 #Duplication Level Percentage of deduplicated Percentage of total 1 82.60679937202961 53.81898559058228 2 11.415299824377021 14.874316918961602 3 2.904135712939587 5.676202417087456 4 1.0941921910541343 2.8514995962237704 5 0.5333269496304347 1.7373337083283935 6 0.32133585686105876 1.2561171706162297 7 0.20414418356324454 0.9310108937737251 8 0.14192637572927735 0.7397292841135166 9 0.10082337749298068 0.5911850776890498 >10 0.5511637398714517 6.847547655472612 >50 0.06996254325655688 3.2840499246071886 >100 0.054469027526852926 6.433557218490985 >500 0.0024208456678282766 0.9584645440531324 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 992 0.1555183133788078 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 788 0.12353672474042394 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 1.567724933254111E-4 13 0.0 0.0 0.0 0.0 1.567724933254111E-4 14 0.0 0.0 0.0 0.0 1.567724933254111E-4 15 0.0 0.0 0.0 0.0 3.135449866508222E-4 16 0.0 0.0 0.0 1.567724933254111E-4 4.703174799762333E-4 17 0.0 0.0 0.0 1.567724933254111E-4 4.703174799762333E-4 18 0.0 0.0 0.0 1.567724933254111E-4 4.703174799762333E-4 19 0.0 0.0 0.0 1.567724933254111E-4 4.703174799762333E-4 20 0.0 0.0 0.0 1.567724933254111E-4 6.270899733016444E-4 21 0.0 0.0 0.0 3.135449866508222E-4 6.270899733016444E-4 22 0.0 0.0 0.0 7.838624666270554E-4 6.270899733016444E-4 23 0.0 0.0 0.0 0.002978677373182811 7.838624666270554E-4 24 0.0 0.0 0.0 0.005330264773063977 7.838624666270554E-4 25 0.0 0.0 0.0 0.007368307186294321 7.838624666270554E-4 26 0.0 0.0 0.0 0.00877925962622302 7.838624666270554E-4 27 0.0 0.0 0.0 0.010817302039453365 7.838624666270554E-4 28 0.0 0.0 0.0 0.01740174675912063 7.838624666270554E-4 29 0.0 0.0 0.0 0.02884613877187564 7.838624666270554E-4 30 0.0 0.0 0.0 0.05345942022396519 7.838624666270554E-4 31 0.0 0.0 0.0 0.09531767594184995 7.838624666270554E-4 32 0.0 0.0 0.0 0.13874365659298882 9.406349599524666E-4 33 0.0 0.0 0.0 0.1782503249109924 9.406349599524666E-4 34 0.0 0.0 0.0 0.22559561789526658 9.406349599524666E-4 35 0.0 0.0 0.0 0.2762331332393744 9.406349599524666E-4 36 0.0 0.0 0.0 0.3463104377558331 9.406349599524666E-4 37 0.0 0.0 0.0 0.45040737332390607 9.406349599524666E-4 38 0.0 0.0 0.0 0.5795879078240448 9.406349599524666E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATAAT 65 1.8133987E-5 23.689352 1 GTATATA 75 5.472695E-5 20.530771 1 TATAGTG 110 1.2628698E-7 20.00064 5 TATCTAG 125 2.2861059E-8 19.357586 1 GCATTCG 235 0.0 18.724003 22 CGTATTG 240 0.0 18.335358 27 ACCCTCG 60 0.0074036405 18.335358 24 ATAATGC 85 1.4299985E-4 18.116808 3 CCTTAGG 110 2.7955539E-6 17.997753 2 GACGGCC 245 0.0 17.956944 11 CCGCTAG 235 0.0 17.789198 36 GCCGCTA 235 0.0 17.789198 35 CGCTAGA 235 0.0 17.789198 37 TTCGTAT 255 0.0 17.255455 25 TAAACGC 90 2.2114391E-4 17.113 28 AACGCAG 2460 0.0 16.992414 6 TAAGAGG 285 0.0 16.983 4 ATTCGTA 260 0.0 16.924948 24 CGCCCGA 130 7.301005E-7 16.92362 26 GTATCAA 2505 0.0 16.860172 1 >>END_MODULE