##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064186_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 715041 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.263898154091862 32.0 32.0 32.0 32.0 32.0 2 31.394563388672818 32.0 32.0 32.0 32.0 32.0 3 31.46224342380367 32.0 32.0 32.0 32.0 32.0 4 31.54277027471152 32.0 32.0 32.0 32.0 32.0 5 31.490381670421694 32.0 32.0 32.0 32.0 32.0 6 35.054910138020055 36.0 36.0 36.0 36.0 36.0 7 35.073492289253345 36.0 36.0 36.0 36.0 36.0 8 35.02728934424739 36.0 36.0 36.0 36.0 36.0 9 35.135325107231616 36.0 36.0 36.0 36.0 36.0 10 34.985953253030246 36.0 36.0 36.0 36.0 36.0 11 35.13079389853169 36.0 36.0 36.0 36.0 36.0 12 35.04560997201559 36.0 36.0 36.0 36.0 36.0 13 35.07106585496496 36.0 36.0 36.0 36.0 36.0 14 35.02693132281925 36.0 36.0 36.0 36.0 36.0 15 34.9995063220151 36.0 36.0 36.0 36.0 36.0 16 35.004134028678074 36.0 36.0 36.0 36.0 36.0 17 34.975660136971165 36.0 36.0 36.0 36.0 36.0 18 34.96439225163312 36.0 36.0 36.0 36.0 36.0 19 34.96165814267993 36.0 36.0 36.0 36.0 36.0 20 34.95547807748087 36.0 36.0 36.0 36.0 36.0 21 34.95134265028159 36.0 36.0 36.0 36.0 36.0 22 34.934363204347726 36.0 36.0 36.0 36.0 36.0 23 34.88258715234511 36.0 36.0 36.0 32.0 36.0 24 34.864283306831354 36.0 36.0 36.0 32.0 36.0 25 34.832710292137094 36.0 36.0 36.0 32.0 36.0 26 34.76968453557209 36.0 36.0 36.0 32.0 36.0 27 34.77051805420948 36.0 36.0 36.0 32.0 36.0 28 34.74702429650887 36.0 36.0 36.0 32.0 36.0 29 34.70721259340373 36.0 36.0 36.0 32.0 36.0 30 34.7007388387519 36.0 36.0 36.0 32.0 36.0 31 34.677005933925464 36.0 36.0 36.0 32.0 36.0 32 34.628537384569555 36.0 36.0 36.0 32.0 36.0 33 34.591258403364286 36.0 36.0 36.0 32.0 36.0 34 34.578225584267194 36.0 36.0 36.0 32.0 36.0 35 34.523603541615095 36.0 36.0 36.0 32.0 36.0 36 34.49675892711047 36.0 36.0 36.0 32.0 36.0 37 34.48521972865892 36.0 36.0 36.0 32.0 36.0 38 34.43603094088311 36.0 36.0 36.0 32.0 36.0 39 34.43204375693142 36.0 36.0 36.0 32.0 36.0 40 34.398199543802384 36.0 36.0 36.0 32.0 36.0 41 34.36845299780013 36.0 36.0 36.0 32.0 36.0 42 34.31273731156675 36.0 36.0 36.0 32.0 36.0 43 34.28762406631228 36.0 36.0 36.0 32.0 36.0 44 34.21246194274175 36.0 36.0 36.0 32.0 36.0 45 34.160622957284964 36.0 36.0 36.0 32.0 36.0 46 34.13313782006906 36.0 36.0 36.0 32.0 36.0 47 34.078492002556494 36.0 36.0 36.0 32.0 36.0 48 34.007119871447934 36.0 36.0 36.0 32.0 36.0 49 33.98295482356956 36.0 36.0 36.0 32.0 36.0 50 33.40663402518177 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 2.0 20 6.0 21 29.0 22 100.0 23 252.0 24 680.0 25 1603.0 26 3073.0 27 5626.0 28 9167.0 29 13844.0 30 19817.0 31 27399.0 32 38970.0 33 61006.0 34 122236.0 35 411229.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.26568575344765 18.524294385856948 12.370415955691067 25.83960390500434 2 15.577183150987436 21.171610261344583 37.46428486517405 25.78692172249393 3 18.068715325220932 25.365820230281788 29.144505808790317 27.420958635706967 4 12.212726263249241 16.679742839921065 36.22337740073646 34.88415349609323 5 13.891790820386523 37.421630368048824 33.3338927418148 15.352686069749847 6 33.0128846118883 36.23242928008123 17.201019804514157 13.553666303516312 7 29.136551801297827 31.105952114567014 21.401180353546657 18.3563157305885 8 27.788336612865557 33.00831700559828 19.795927785959126 19.407418595577035 9 27.62759864901718 14.15972644695714 18.954596628137086 39.25807827588859 10 15.98660766730626 27.30435950078038 31.80776911931707 24.90126371259629 11 36.365467155030274 21.56435784801151 23.022176350726742 19.047998646231477 12 24.741761976286575 24.175078807000467 29.12530522853331 21.95785398817965 13 29.6104956806431 20.078541390165825 25.56035561796103 24.75060731123005 14 23.61829214909956 19.890103896430826 26.18500529341756 30.306598661052053 15 24.78304833004905 27.481570471356786 23.177221368323448 24.55815983027072 16 24.98360224715644 26.005507407308993 24.681799683093324 24.329090662441246 17 23.41404199199766 26.071092426867832 25.95851146997165 24.556354111162857 18 24.064874873782934 25.301872068337627 27.221909884509632 23.411343173369804 19 25.245825064576717 25.046395940932058 26.395129789760308 23.312649204730917 20 25.711676458700737 24.43789622075501 25.975439033224855 23.874988287319397 21 26.611061463608383 24.297347984241462 25.42819222953649 23.66339832261367 22 25.496930936634225 24.520340848541128 25.866421272126416 24.11630694269823 23 24.323352908187452 24.425166390921817 26.388572275685178 24.86290842520555 24 24.38971860276153 25.093596293349034 26.312550783943255 24.204134319946185 25 24.575224642495016 24.780112583476104 26.320897870703817 24.32376490332506 26 24.157072368421055 25.514539697457934 26.55984268707483 23.768545247046184 27 24.541744406246764 25.105665222365502 26.125114336623806 24.227476034763928 28 23.98976796096273 25.11744607410536 26.574490670746805 24.31829529418511 29 24.18543894760544 25.1164657623525 26.28147302791402 24.416622262128033 30 24.16536249092671 25.345344337359844 26.431061899747 24.058231271966445 31 24.545029874460134 25.15230939646877 25.681825810638443 24.620834918432656 32 24.20179326414073 25.599677766293848 25.51953891489478 24.678990054670642 33 24.0893420325732 25.09325109614618 25.99464339410214 24.82276347717848 34 24.639519564542432 25.199785180233224 26.146334777586016 24.014360477638323 35 25.045488556184136 25.098914008797017 26.05511772480298 23.800479710215868 36 24.219537813656917 25.7026292565102 25.758853583181935 24.318979346650945 37 24.91528149759096 25.531492346314412 25.58911351510108 23.964112640993545 38 24.302849582227246 25.506795975283293 25.892819679376544 24.297534763112917 39 24.616821933211845 25.444086561390307 25.526183659740393 24.412907845657454 40 25.071921165731258 25.45666618649295 25.796377438921205 23.675035208854588 41 24.128517224066 25.73197560337726 26.297136991148463 23.842370181408274 42 24.909653887679923 25.990730432934093 25.63619886214246 23.46341681724352 43 24.186228646150187 25.398337144335592 25.816638346374653 24.598795863139568 44 24.043153373769808 25.877479437954438 25.404073389825054 24.675293798450696 45 24.25860065199788 25.907195891658148 25.43518970453112 24.399013751812852 46 24.247764095463857 25.647835420643744 25.337221254903607 24.76717922898879 47 24.449737210883022 25.725362296544724 25.56298967024791 24.26191082232435 48 24.813539031284044 25.981743397820228 24.928499403520696 24.27621816737503 49 24.218153440796154 26.08840369323029 25.03601207208568 24.657430793887876 50 24.27174282441691 26.41878860857392 24.975070941178608 24.33439762583056 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 293.0 1 166.0 2 39.0 3 134.0 4 229.0 5 237.5 6 246.0 7 254.0 8 262.0 9 335.5 10 409.0 11 603.0 12 797.0 13 1480.5 14 2164.0 15 2786.0 16 3408.0 17 3583.0 18 3758.0 19 3702.5 20 3647.0 21 3868.0 22 4089.0 23 4466.5 24 4844.0 25 5069.5 26 5295.0 27 6223.5 28 7152.0 29 8448.5 30 9745.0 31 11353.5 32 12962.0 33 15135.0 34 17308.0 35 19912.5 36 22517.0 37 25404.0 38 28291.0 39 30293.5 40 32296.0 41 34775.0 42 37254.0 43 38455.0 44 39656.0 45 43315.0 46 46974.0 47 49465.0 48 51956.0 49 53319.0 50 54682.0 51 53346.5 52 52011.0 53 50999.0 54 49987.0 55 49568.5 56 49150.0 57 47298.0 58 45446.0 59 41100.5 60 36755.0 61 32396.0 62 28037.0 63 24160.0 64 20283.0 65 17128.0 66 13973.0 67 11849.5 68 9726.0 69 8576.0 70 7426.0 71 5762.0 72 4098.0 73 3559.0 74 3020.0 75 2336.0 76 1652.0 77 1436.5 78 1221.0 79 1018.0 80 815.0 81 673.0 82 531.0 83 430.0 84 329.0 85 237.0 86 145.0 87 112.5 88 80.0 89 55.5 90 31.0 91 23.5 92 16.0 93 14.0 94 12.0 95 11.0 96 10.0 97 9.5 98 9.0 99 7.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0085309793424433 2 0.0011188169629433836 3 5.594084814716918E-4 4 0.0 5 0.0 6 2.797042407358459E-4 7 1.3985212036792295E-4 8 0.0 9 8.391127222075378E-4 10 6.992606018396149E-4 11 0.0 12 4.195563611037689E-4 13 5.594084814716918E-4 14 2.797042407358459E-4 15 0.0027970424073584595 16 5.594084814716918E-4 17 0.0 18 4.195563611037689E-4 19 0.0 20 5.594084814716918E-4 21 0.0 22 2.797042407358459E-4 23 0.0011188169629433836 24 2.797042407358459E-4 25 0.002237633925886767 26 0.004615119972141458 27 0.0065730496572923795 28 0.004475267851773534 29 0.0033564508888301514 30 0.004195563611037689 31 0.006852753898028226 32 0.004475267851773534 33 0.005034676333245227 34 0.003216598768462228 35 0.0036361551295659967 36 0.006712901777660303 37 0.0036361551295659967 38 0.008251275101707456 39 0.004754972092509381 40 0.003076746648094305 41 0.0033564508888301514 42 0.0018180775647829983 43 8.391127222075378E-4 44 0.0013985212036792297 45 0.0011188169629433836 46 8.391127222075378E-4 47 0.002657190286990536 48 0.0016782254444150757 49 4.195563611037689E-4 50 0.0016782254444150757 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 715041.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.67282939279347 #Duplication Level Percentage of deduplicated Percentage of total 1 80.32865931838316 51.95081679449625 2 12.81519909368756 16.57590369241474 3 3.475940459413644 6.743967129335003 4 1.2983289780180833 3.3586643396433367 5 0.6384803006521235 2.0646163777367135 6 0.3489916443870045 1.3542166246170713 7 0.21569198345882812 0.9764587593338215 8 0.14096848156678707 0.7293464446503978 9 0.09913096754379294 0.5769972136352042 >10 0.5243831864469978 6.258850286173759 >50 0.06714053761380474 3.092377297057638 >100 0.045123171794294835 5.534934585086869 >500 0.0019618770339536852 0.7828504558192678 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 991 0.13859345128461167 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 757 0.10586805511851767 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 2.797042407358459E-4 9 0.0 0.0 0.0 0.0 2.797042407358459E-4 10 0.0 0.0 0.0 0.0 2.797042407358459E-4 11 0.0 0.0 0.0 0.0 2.797042407358459E-4 12 0.0 0.0 0.0 0.0 2.797042407358459E-4 13 0.0 0.0 0.0 0.0 2.797042407358459E-4 14 0.0 0.0 0.0 0.0 4.1955636110376887E-4 15 0.0 0.0 0.0 0.0 4.1955636110376887E-4 16 0.0 0.0 0.0 0.0 4.1955636110376887E-4 17 0.0 0.0 0.0 0.0 4.1955636110376887E-4 18 0.0 0.0 0.0 0.0 5.594084814716918E-4 19 0.0 0.0 0.0 0.0 5.594084814716918E-4 20 0.0 0.0 0.0 0.0 6.992606018396148E-4 21 0.0 0.0 0.0 0.0 6.992606018396148E-4 22 0.0 0.0 0.0 5.594084814716918E-4 6.992606018396148E-4 23 0.0 0.0 0.0 0.0015383733240471526 8.391127222075377E-4 24 0.0 0.0 0.0 0.003076746648094305 8.391127222075377E-4 25 0.0 0.0 0.0 0.003216598768462228 8.391127222075377E-4 26 0.0 0.0 0.0 0.003636155129565997 8.391127222075377E-4 27 0.0 0.0 0.0 0.004335415731405612 8.391127222075377E-4 28 0.0 0.0 0.0 0.007272310259131994 8.391127222075377E-4 29 0.0 0.0 0.0 0.012167134472009298 8.391127222075377E-4 30 0.0 0.0 0.0 0.02167707865702806 8.391127222075377E-4 31 0.0 0.0 0.0 0.04237519247148066 8.391127222075377E-4 32 0.0 0.0 0.0 0.06559064445255587 8.391127222075377E-4 33 0.0 0.0 0.0 0.08586920190590469 8.391127222075377E-4 34 0.0 0.0 0.0 0.10908465388697991 8.391127222075377E-4 35 0.0 0.0 0.0 0.14041152884939465 8.391127222075377E-4 36 0.0 0.0 0.0 0.18054908739498854 8.391127222075377E-4 37 0.0 0.0 0.0 0.245020914884601 8.391127222075377E-4 38 0.0 0.0 0.0 0.32963144770719444 8.391127222075377E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACCGT 50 8.342523E-5 26.397312 6 ATAGCGT 135 1.1277734E-10 21.183031 6 AGCGTAT 140 1.8553692E-10 20.426495 8 TAGCGTA 140 1.8553692E-10 20.426495 7 CGAGACT 130 1.6207196E-9 20.308466 20 CGTCGTA 120 1.4306352E-8 20.164614 10 TTAACGG 55 0.004479047 20.002163 35 TATGCCG 55 0.0044844896 19.997967 5 CGACGGT 170 5.456968E-12 19.40979 7 ACGACGG 170 5.456968E-12 19.40979 6 ACTTAGG 80 8.984223E-5 19.249388 1 CGTATAT 150 4.656613E-10 19.064726 10 CCGTCCA 105 1.792343E-6 18.855225 9 TACGACG 165 8.185452E-11 18.664768 5 CCGTCGT 130 3.58541E-8 18.613491 9 CTAATAC 190 1.8189894E-12 18.524431 3 AATAGCG 155 7.203198E-10 18.449738 5 TTGCGGT 60 0.007413564 18.331469 11 ACGAGAC 145 6.3027983E-9 18.205044 19 ACGAACG 145 6.3027983E-9 18.205044 15 >>END_MODULE