SRR4064185_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4064185_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	165154
Sequences flagged as poor quality	0
Sequence length	50
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG	490	0.2966927837049057	No Hit
GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC	286	0.17317170640735313	No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA	187	0.1132276541894232	No Hit
GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAG	184	0.11141116775857685	No Hit
ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGTCCACTTTAAATC	182	0.11020017680467926	No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG	178	0.10777819489688412	No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA	176	0.10656720394298655	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCAATA	35	7.252407E-6	37.714287	36
ATAATAC	25	0.002346934	35.2	3
GATGCGG	50	5.893162E-8	35.2	34
ATGCGGC	50	5.893162E-8	35.2	35
GGCGTTA	55	1.3615681E-7	32.0	42
CGTTATT	55	1.3615681E-7	32.0	44
TGCGGCG	60	2.9194234E-7	29.333332	36
AGACTGT	40	7.0062815E-4	27.5	6
TCGCACG	40	7.0062815E-4	27.5	13
GATCGCA	40	7.0062815E-4	27.5	11
CCGATCG	40	7.0062815E-4	27.5	9
CGATCGC	40	7.0062815E-4	27.5	10
GCGTTAT	65	5.87921E-7	27.076923	43
GCGATGC	65	5.87921E-7	27.076923	32
CGATGCG	65	5.87921E-7	27.076923	33
TAGCGGC	50	8.298695E-5	26.400002	30
ATACGAA	50	8.298695E-5	26.400002	40
CAATACG	50	8.298695E-5	26.400002	38
CTAGCGG	50	8.298695E-5	26.400002	29
GGATGAA	45	0.0013931147	24.444445	1