##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064185_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 165154 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.59976143478208 32.0 32.0 32.0 21.0 32.0 2 28.628056238419898 32.0 32.0 32.0 14.0 32.0 3 30.32558097291013 32.0 32.0 32.0 21.0 32.0 4 30.8576359034598 32.0 32.0 32.0 32.0 32.0 5 30.389830097969167 32.0 32.0 32.0 21.0 32.0 6 34.12452619978929 36.0 36.0 36.0 32.0 36.0 7 34.15365053223052 36.0 36.0 36.0 32.0 36.0 8 33.989204015646 36.0 36.0 36.0 32.0 36.0 9 34.46344018310183 36.0 36.0 36.0 32.0 36.0 10 33.721393366191556 36.0 36.0 36.0 21.0 36.0 11 34.549686958838414 36.0 36.0 36.0 32.0 36.0 12 34.18173946740618 36.0 36.0 36.0 32.0 36.0 13 34.3855976845853 36.0 36.0 36.0 32.0 36.0 14 34.22187170761834 36.0 36.0 36.0 32.0 36.0 15 34.09547452680528 36.0 36.0 36.0 32.0 36.0 16 34.13927606960776 36.0 36.0 36.0 32.0 36.0 17 34.09324024849534 36.0 36.0 36.0 32.0 36.0 18 34.11453552441963 36.0 36.0 36.0 32.0 36.0 19 34.12287319713722 36.0 36.0 36.0 32.0 36.0 20 34.154831248410574 36.0 36.0 36.0 32.0 36.0 21 34.16761931288373 36.0 36.0 36.0 32.0 36.0 22 34.101874613996635 36.0 36.0 36.0 32.0 36.0 23 34.03176429272073 36.0 36.0 36.0 32.0 36.0 24 33.96833864151035 36.0 36.0 36.0 32.0 36.0 25 33.920892015936644 36.0 36.0 36.0 32.0 36.0 26 33.81468810927982 36.0 36.0 36.0 32.0 36.0 27 33.82319532073095 36.0 36.0 36.0 32.0 36.0 28 33.7503965995374 36.0 36.0 36.0 32.0 36.0 29 33.69746418494254 36.0 36.0 36.0 32.0 36.0 30 33.67523644598375 36.0 36.0 36.0 27.0 36.0 31 33.714539157392494 36.0 36.0 36.0 32.0 36.0 32 33.62542233309517 36.0 36.0 36.0 27.0 36.0 33 33.560694866609346 36.0 36.0 36.0 21.0 36.0 34 33.52979643242065 36.0 36.0 36.0 21.0 36.0 35 33.5351247926178 36.0 36.0 36.0 21.0 36.0 36 33.42749797159015 36.0 36.0 36.0 21.0 36.0 37 33.45001634837788 36.0 36.0 36.0 21.0 36.0 38 33.37478959032176 36.0 36.0 36.0 21.0 36.0 39 33.38849195296511 36.0 36.0 36.0 21.0 36.0 40 33.349558593797305 36.0 36.0 36.0 21.0 36.0 41 33.282663453504 36.0 36.0 36.0 21.0 36.0 42 33.205820022524435 36.0 36.0 36.0 21.0 36.0 43 33.23918887825908 36.0 36.0 36.0 21.0 36.0 44 33.07538418688012 36.0 36.0 36.0 21.0 36.0 45 33.01005122491735 36.0 36.0 36.0 14.0 36.0 46 33.02831296850213 36.0 36.0 36.0 14.0 36.0 47 33.031697688218266 36.0 36.0 36.0 14.0 36.0 48 32.91914818896303 36.0 36.0 36.0 14.0 36.0 49 32.864708090630565 36.0 36.0 36.0 14.0 36.0 50 31.9639427443477 36.0 32.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 3.0 21 11.0 22 22.0 23 60.0 24 166.0 25 444.0 26 948.0 27 1754.0 28 3322.0 29 5723.0 30 8971.0 31 13907.0 32 21001.0 33 31330.0 34 43055.0 35 34437.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.3517732471889 19.192365681899375 12.556539851891321 22.8993212190204 2 17.867674217240985 22.2333230398479 36.549744782111134 23.349257960799985 3 20.36523487169551 25.52163435339138 29.830340167358948 24.282790607554162 4 15.227000254308102 18.20422151446529 37.88706298363952 28.681715247587103 5 18.85512915218523 34.26377804957797 31.376775615486153 15.504317182750645 6 33.19689501919421 38.404761616430726 15.929980503045643 12.468362861329425 7 29.17579955677731 31.65893650774429 20.468169102776802 18.697094832701598 8 27.864296353706237 33.53415599985468 18.65168267193044 19.949864974508642 9 26.846015512888048 13.712739096474177 18.1982767494384 41.242968641199376 10 15.054434043377697 26.62605810334597 31.611102365065335 26.708405488211 11 37.19740363539484 21.200818629884836 22.27194012860724 19.32983760611308 12 24.002446201726872 23.95037359070928 28.82158470276227 23.22559550480158 13 29.114391590776982 19.687923851966673 25.3481641154815 25.84952044177485 14 23.599186214078983 19.610787507417317 25.499231020744272 31.290795257759424 15 25.111569972690333 27.114076890936943 22.32852739746765 25.44582573890507 16 25.375104447969775 26.595177834021577 23.636726933649804 24.39299078435884 17 23.458105767949913 26.503748017002316 25.32666480981387 24.711481405233904 18 24.300955471862626 25.451396878065317 26.253678385022468 23.99396926504959 19 24.862400319703546 25.83301544628314 25.998316712381854 23.306267521631458 20 25.02815553967812 24.623684561076328 25.290940576673894 25.05721932257166 21 26.254889375976358 24.884653111641256 24.750233115758626 24.110224396623757 22 25.12382382503603 24.929459776935467 25.71115443767635 24.235561960352157 23 24.199837727212177 24.50864042045606 26.153166135848966 25.138355716482796 24 23.910410889230658 25.908545963161657 25.773520471802076 24.407522675805613 25 24.347267971323387 24.849229800426272 26.046308854873086 24.757193373377255 26 24.37934458788481 25.547387797611837 26.01424177101751 24.05902584348584 27 24.865725686812354 25.177569074824248 25.620810550600375 24.335894687763023 28 23.614609571788414 25.134421623716335 26.772912226312727 24.47805657818252 29 24.056312443233423 25.43082046624281 26.03693611867999 24.47593097184378 30 24.0288954688853 25.566919168982782 26.653224097319356 23.750961264812563 31 24.970782543402304 25.355907981664156 25.44673945295233 24.226570021981217 32 24.780652622783062 25.40009324912655 25.353468685853382 24.46578544223701 33 23.993654330556094 25.118073047858942 26.21645514435187 24.671817477233095 34 24.356940441301138 24.988495167970548 26.641557875360284 24.013006515368033 35 25.690739877322905 24.748560390919717 25.8148702081151 23.745829523642286 36 24.203833227359432 25.72137947739728 25.525176370848097 24.54961092439519 37 25.45777121127716 25.233729745440453 25.678179572262454 23.630319471019934 38 24.406268544646426 24.938537743275486 26.093907061801357 24.56128665027673 39 24.709501232235525 25.15516479257873 25.331371444833994 24.803962530351747 40 25.002724795640326 25.731153496821076 25.77838328792007 23.487738419618527 41 23.88659800056919 25.816393879392297 26.136109042247206 24.1608990777913 42 25.42506297229219 26.135317767874444 25.29306335981399 23.146555900019376 43 24.558439749807754 24.922344734882202 26.10730655816122 24.411908957148825 44 24.440972916023323 25.818483466845894 25.116709959855406 24.623833657275377 45 24.398587975998016 26.212057909938057 25.456394979201104 23.932959134862823 46 24.00971214745026 25.91641740436199 25.192244813931243 24.881625634256512 47 24.396003633060854 25.386618225855283 26.004844081138355 24.212534059945504 48 25.23402966999697 26.283378746594003 24.775052982137453 23.707538601271573 49 24.266736097655492 25.954877930633597 25.156825227669056 24.62156074404185 50 25.222066810775463 25.463660968919726 24.79155691994696 24.52271530035785 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 4.0 1 6.0 2 8.0 3 15.5 4 23.0 5 28.0 6 33.0 7 33.0 8 33.0 9 46.0 10 59.0 11 69.0 12 79.0 13 168.5 14 258.0 15 360.5 16 463.0 17 517.0 18 571.0 19 605.0 20 639.0 21 744.0 22 849.0 23 1013.5 24 1178.0 25 1390.0 26 1602.0 27 1942.0 28 2282.0 29 2568.5 30 2855.0 31 3147.0 32 3439.0 33 3800.0 34 4161.0 35 4708.0 36 5255.0 37 5966.5 38 6678.0 39 7319.5 40 7961.0 41 8625.0 42 9289.0 43 9359.0 44 9429.0 45 10019.5 46 10610.0 47 11103.5 48 11597.0 49 11791.0 50 11985.0 51 11345.0 52 10705.0 53 10443.5 54 10182.0 55 10402.0 56 10622.0 57 10499.5 58 10377.0 59 9194.0 60 8011.0 61 7161.0 62 6311.0 63 5571.0 64 4831.0 65 4199.5 66 3568.0 67 3129.0 68 2690.0 69 2505.5 70 2321.0 71 1808.0 72 1295.0 73 1129.0 74 963.0 75 793.5 76 624.0 77 517.5 78 411.0 79 367.0 80 323.0 81 263.0 82 203.0 83 182.5 84 162.0 85 126.5 86 91.0 87 68.0 88 45.0 89 33.5 90 22.0 91 19.0 92 16.0 93 16.5 94 17.0 95 14.0 96 11.0 97 7.5 98 4.0 99 6.5 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.003027477384743936 2 6.054954769487872E-4 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 6.054954769487872E-4 10 0.0 11 0.0 12 0.0 13 0.0012109909538975743 14 0.0 15 0.006660450246436659 16 0.0 17 0.0 18 0.0 19 6.054954769487872E-4 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0012109909538975743 26 0.003632972861692723 27 0.00423846833864151 28 0.0012109909538975743 29 0.0024219819077951486 30 0.00423846833864151 31 0.007871441200334233 32 0.003027477384743936 33 0.0012109909538975743 34 0.003632972861692723 35 0.003027477384743936 36 0.011504414062026957 37 0.003632972861692723 38 0.007265945723385446 39 0.00423846833864151 40 0.0024219819077951486 41 0.00423846833864151 42 0.0012109909538975743 43 6.054954769487872E-4 44 6.054954769487872E-4 45 6.054954769487872E-4 46 0.0 47 0.0024219819077951486 48 0.0024219819077951486 49 0.0012109909538975743 50 6.054954769487872E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 165154.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 71.33110665990002 #Duplication Level Percentage of deduplicated Percentage of total 1 88.62774232034036 63.21914940478332 2 7.24676134303897 10.33839012598306 3 1.6357157120537602 3.5003223576534315 4 0.6790559114000906 1.937512385764619 5 0.37882317504741553 1.3510938152274583 6 0.2212306880289721 0.9468377882542605 7 0.17537608719329667 0.8756839266826679 8 0.13352267100149495 0.7619455909377899 9 0.1066184515981924 0.6844690928577645 >10 0.6925210307185323 9.664295802796916 >50 0.07672534890849636 3.781279159406907 >100 0.025907260670401364 2.9390205496517967 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 490 0.2966927837049057 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 286 0.17317170640735313 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 187 0.1132276541894232 No Hit GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAG 184 0.11141116775857685 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGTCCACTTTAAATC 182 0.11020017680467926 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 178 0.10777819489688412 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 176 0.10656720394298655 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 6.054954769487872E-4 9 0.0 0.0 0.0 0.0 6.054954769487872E-4 10 0.0 0.0 0.0 0.0 6.054954769487872E-4 11 0.0 0.0 0.0 0.0 6.054954769487872E-4 12 0.0 0.0 0.0 0.0 6.054954769487872E-4 13 0.0 0.0 0.0 0.0 6.054954769487872E-4 14 0.0 0.0 0.0 0.0 6.054954769487872E-4 15 0.0 0.0 0.0 0.0 6.054954769487872E-4 16 0.0 0.0 0.0 0.0 6.054954769487872E-4 17 0.0 0.0 0.0 0.0 6.054954769487872E-4 18 0.0 0.0 0.0 0.0 6.054954769487872E-4 19 0.0 0.0 0.0 0.0 6.054954769487872E-4 20 0.0 0.0 0.0 0.0 6.054954769487872E-4 21 0.0 0.0 0.0 0.0 6.054954769487872E-4 22 0.0 0.0 0.0 0.0 6.054954769487872E-4 23 0.0 0.0 0.0 0.0 6.054954769487872E-4 24 0.0 0.0 0.0 0.0012109909538975743 6.054954769487872E-4 25 0.0 0.0 0.0 0.0012109909538975743 6.054954769487872E-4 26 0.0 0.0 0.0 0.003027477384743936 6.054954769487872E-4 27 0.0 0.0 0.0 0.003027477384743936 6.054954769487872E-4 28 0.0 0.0 0.0 0.003027477384743936 6.054954769487872E-4 29 0.0 0.0 0.0 0.003027477384743936 6.054954769487872E-4 30 0.0 0.0 0.0 0.00423846833864151 6.054954769487872E-4 31 0.0 0.0 0.0 0.00847693667728302 6.054954769487872E-4 32 0.0 0.0 0.0 0.013320900492873319 6.054954769487872E-4 33 0.0 0.0 0.0 0.01937585526236119 6.054954769487872E-4 34 0.0 0.0 0.0 0.026641800985746637 0.0018164864308463616 35 0.0 0.0 0.0 0.03451324218608087 0.0018164864308463616 36 0.0 0.0 0.0 0.0423846833864151 0.0018164864308463616 37 0.0 0.0 0.0 0.06297152960267387 0.0018164864308463616 38 0.0 0.0 0.0 0.08840233963452293 0.0018164864308463616 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCAATA 35 7.252407E-6 37.714287 36 ATAATAC 25 0.002346934 35.2 3 GATGCGG 50 5.893162E-8 35.2 34 ATGCGGC 50 5.893162E-8 35.2 35 GGCGTTA 55 1.3615681E-7 32.0 42 CGTTATT 55 1.3615681E-7 32.0 44 TGCGGCG 60 2.9194234E-7 29.333332 36 AGACTGT 40 7.0062815E-4 27.5 6 TCGCACG 40 7.0062815E-4 27.5 13 GATCGCA 40 7.0062815E-4 27.5 11 CCGATCG 40 7.0062815E-4 27.5 9 CGATCGC 40 7.0062815E-4 27.5 10 GCGTTAT 65 5.87921E-7 27.076923 43 GCGATGC 65 5.87921E-7 27.076923 32 CGATGCG 65 5.87921E-7 27.076923 33 TAGCGGC 50 8.298695E-5 26.400002 30 ATACGAA 50 8.298695E-5 26.400002 40 CAATACG 50 8.298695E-5 26.400002 38 CTAGCGG 50 8.298695E-5 26.400002 29 GGATGAA 45 0.0013931147 24.444445 1 >>END_MODULE