##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064184_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1623216 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.242956575095366 32.0 32.0 32.0 32.0 32.0 2 31.291323520714432 32.0 32.0 32.0 32.0 32.0 3 31.405376117534573 32.0 32.0 32.0 32.0 32.0 4 31.513052483464925 32.0 32.0 32.0 32.0 32.0 5 31.42560324688766 32.0 32.0 32.0 32.0 32.0 6 35.03603217316734 36.0 36.0 36.0 36.0 36.0 7 35.058336660062494 36.0 36.0 36.0 36.0 36.0 8 34.99872660200491 36.0 36.0 36.0 36.0 36.0 9 35.14093503267587 36.0 36.0 36.0 36.0 36.0 10 34.95630649278962 36.0 36.0 36.0 36.0 36.0 11 35.13896055731338 36.0 36.0 36.0 36.0 36.0 12 35.032771362529694 36.0 36.0 36.0 36.0 36.0 13 35.08087463405979 36.0 36.0 36.0 36.0 36.0 14 35.02294580634987 36.0 36.0 36.0 36.0 36.0 15 34.98656124631596 36.0 36.0 36.0 36.0 36.0 16 34.99839454514988 36.0 36.0 36.0 36.0 36.0 17 34.96252501207479 36.0 36.0 36.0 36.0 36.0 18 34.96582709879646 36.0 36.0 36.0 36.0 36.0 19 34.968324609910205 36.0 36.0 36.0 36.0 36.0 20 34.95687080462489 36.0 36.0 36.0 36.0 36.0 21 34.95765813052607 36.0 36.0 36.0 36.0 36.0 22 34.93266576968192 36.0 36.0 36.0 36.0 36.0 23 34.887521438921254 36.0 36.0 36.0 32.0 36.0 24 34.85565876630097 36.0 36.0 36.0 32.0 36.0 25 34.828800356822505 36.0 36.0 36.0 32.0 36.0 26 34.76075765640555 36.0 36.0 36.0 32.0 36.0 27 34.757109343426876 36.0 36.0 36.0 32.0 36.0 28 34.73783834067678 36.0 36.0 36.0 32.0 36.0 29 34.70637857192142 36.0 36.0 36.0 32.0 36.0 30 34.69673536978443 36.0 36.0 36.0 32.0 36.0 31 34.69504120215671 36.0 36.0 36.0 32.0 36.0 32 34.648006796384465 36.0 36.0 36.0 32.0 36.0 33 34.624865698711695 36.0 36.0 36.0 32.0 36.0 34 34.61631600477077 36.0 36.0 36.0 32.0 36.0 35 34.5736020344797 36.0 36.0 36.0 32.0 36.0 36 34.552394752146355 36.0 36.0 36.0 32.0 36.0 37 34.545993878818344 36.0 36.0 36.0 32.0 36.0 38 34.50272976609398 36.0 36.0 36.0 32.0 36.0 39 34.50220118579413 36.0 36.0 36.0 32.0 36.0 40 34.482619072261485 36.0 36.0 36.0 32.0 36.0 41 34.46908544519029 36.0 36.0 36.0 32.0 36.0 42 34.39472319149146 36.0 36.0 36.0 32.0 36.0 43 34.39633172664636 36.0 36.0 36.0 32.0 36.0 44 34.33314173837616 36.0 36.0 36.0 32.0 36.0 45 34.294850469684874 36.0 36.0 36.0 32.0 36.0 46 34.28258469606017 36.0 36.0 36.0 32.0 36.0 47 34.24333976500971 36.0 36.0 36.0 32.0 36.0 48 34.206469132881885 36.0 36.0 36.0 32.0 36.0 49 34.19556300578604 36.0 36.0 36.0 32.0 36.0 50 33.55954352347439 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 4.0 20 14.0 21 55.0 22 181.0 23 505.0 24 1260.0 25 2976.0 26 5948.0 27 11035.0 28 18269.0 29 28147.0 30 41947.0 31 60543.0 32 88733.0 33 145527.0 34 302821.0 35 915249.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.63037389453865 18.028215526302493 11.89764139492988 26.443769184228977 2 16.12454295949705 20.298912959774277 36.574267734095606 27.00227634663307 3 18.11269610002372 24.061630775960055 28.8307463891105 28.99492673490573 4 12.352884643818198 15.914456239958206 35.76153758957526 35.97112152664833 5 14.505956077318114 36.77963992469271 33.236673369409864 15.477730628579314 6 34.861844995080745 35.51320744720502 16.405918385325894 13.219029172388344 7 30.57161250974147 30.402442067132203 20.560615814910534 18.465329608215793 8 28.436634434357472 32.95679687731023 18.927487161289687 19.679081527042612 9 27.589085436138365 13.723355690557293 18.074358562065168 40.613200311239176 10 15.78061525609385 26.849594071934717 31.605217860588446 25.76457281138299 11 37.67058727858769 20.774006663315294 22.220825817389674 19.334580240707336 12 24.7585193581873 23.559355969480322 28.622024808789963 23.060099863542412 13 29.75712954138433 19.236254559635192 25.031434607084353 25.975181291896128 14 23.762210328138707 19.1535815319711 25.096228721254594 31.987979418635597 15 25.412966011474087 27.01825355361473 22.00893825286359 25.559842182047593 16 26.10076706080363 25.543845555316658 23.358914348059923 24.996473035819786 17 24.330218529142147 25.839629476298903 24.912580950409556 24.91757104414939 18 25.17774953471853 24.878219775494376 25.667581109295096 24.276449580492 19 25.861392360223384 24.733384055716588 25.07887125242189 24.326352331638137 20 26.052931018656277 24.099637322904595 24.669312047077174 25.178119611361954 21 27.058074834156393 24.013008743137082 24.20891612699727 24.72000029570926 22 26.18927633694633 24.01685791275827 24.6953266790454 25.098539071250002 23 24.757871002122343 23.953659580890893 25.18449610492821 26.10397331205855 24 25.204332898597777 24.646548904053635 24.886628893753056 25.26248930359553 25 25.24718347300712 24.16819503852606 25.13937087963371 25.445250608833113 26 25.155424341876255 24.911760375125453 25.301684331020734 24.63113095197756 27 25.607497594160435 24.62698705097669 24.575851408448102 25.189663946414775 28 24.924668687001862 24.406852546540303 25.353153072119067 25.31532569433877 29 25.00921030420495 24.59594795900891 25.14640995279642 25.248431783989716 30 24.944891650022242 24.773991076698255 25.233586706473645 25.047530566805857 31 25.406181362265535 24.562797847335816 24.555158169064846 25.4758626213338 32 25.328093368145954 24.531563623190728 24.329551013266666 25.81079199539665 33 24.90909650987278 24.29430428487817 24.935834642516095 25.860764562732957 34 25.58091824419359 24.302673237376656 25.129885291865328 24.98652322656443 35 25.985525844813452 24.221137786638362 25.026784025569732 24.766552342978457 36 24.976634175283426 24.891796362139786 24.749044573429686 25.382524889147106 37 25.935783247359005 24.584159654106593 24.546024141812357 24.934032956722046 38 25.07741349588627 24.453731188797747 25.052214833078885 25.416640482237103 39 25.676444114771403 24.380204749140102 24.522889652695333 25.420461483393165 40 25.883788755666338 24.541240600253083 24.84397929498972 24.73099134909086 41 24.982873083387137 24.820352198406088 25.255363558850057 24.94141115935672 42 26.072505598560852 24.928766591608472 24.608963242021087 24.389764567809586 43 25.35497782158699 24.18629866929522 24.94276737309019 25.5159561360276 44 25.065703629501762 24.739680556530995 24.585109148729853 25.60950666523739 45 25.070709398081437 24.838451126883864 24.785900382764094 25.304939092270608 46 25.016864824504175 24.555615724731563 24.853607162637285 25.573912288126976 47 25.27017919124288 24.508527078294364 25.13051524721196 25.090778483250798 48 25.910232043790447 25.046867732267113 24.22829190757677 24.814608316365664 49 25.13300788806391 25.108981451591045 24.415171893751403 25.342838766593644 50 25.135426684154723 25.17251385070136 24.416970643844298 25.27508882129962 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 24.0 1 26.0 2 28.0 3 81.5 4 135.0 5 157.0 6 179.0 7 178.5 8 178.0 9 260.0 10 342.0 11 491.5 12 641.0 13 1343.0 14 2045.0 15 2688.0 16 3331.0 17 3586.0 18 3841.0 19 3849.0 20 3857.0 21 4199.5 22 4542.0 23 5303.5 24 6065.0 25 7117.5 26 8170.0 27 10160.0 28 12150.0 29 14618.5 30 17087.0 31 19817.0 32 22547.0 33 26264.0 34 29981.0 35 34748.0 36 39515.0 37 47834.5 38 56154.0 39 61484.5 40 66815.0 41 73913.5 42 81012.0 43 84701.5 44 88391.0 45 97570.0 46 106749.0 47 114206.5 48 121664.0 49 125195.0 50 128726.0 51 126630.5 52 124535.0 53 123404.5 54 122274.0 55 122459.0 56 122644.0 57 119214.0 58 115784.0 59 105475.0 60 95166.0 61 83826.0 62 72486.0 63 62548.0 64 52610.0 65 44391.5 66 36173.0 67 30902.0 68 25631.0 69 22841.0 70 20051.0 71 15638.5 72 11226.0 73 9591.5 74 7957.0 75 6161.5 76 4366.0 77 3834.0 78 3302.0 79 2677.5 80 2053.0 81 1637.5 82 1222.0 83 1013.0 84 804.0 85 575.0 86 346.0 87 244.5 88 143.0 89 117.0 90 91.0 91 76.0 92 61.0 93 47.0 94 33.0 95 37.5 96 42.0 97 30.5 98 19.0 99 23.5 100 28.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008501641186385545 2 6.160609555351845E-5 3 6.160609555351845E-5 4 0.0 5 0.0 6 1.8481828666055535E-4 7 6.160609555351845E-5 8 0.0 9 0.001663364579944998 10 0.0013553341021774058 11 0.0 12 6.160609555351845E-5 13 3.0803047776759224E-4 14 0.0 15 0.004928487644281476 16 4.312426688746291E-4 17 0.0 18 3.0803047776759224E-4 19 6.160609555351845E-5 20 5.54454859981666E-4 21 0.0 22 1.232121911070369E-4 23 6.776670510887029E-4 24 4.312426688746291E-4 25 0.0017865767710520352 26 0.004866881548727957 27 0.0050516998353885125 28 0.0032651230643364775 29 0.0020946072488196273 30 0.003080304777675922 31 0.006838276606440547 32 0.003080304777675922 33 0.004066002306532217 34 0.0032651230643364775 35 0.002895486491015367 36 0.007331125370868696 37 0.003511547446550552 38 0.007023094893101104 39 0.0036347596376575886 40 0.0020946072488196273 41 0.002464243822140738 42 0.001909788962159072 43 9.856975288562951E-4 44 0.001108909719963332 45 0.0014169401977309243 46 9.240914333027767E-4 47 0.0020946072488196273 48 0.001909788962159072 49 2.464243822140738E-4 50 8.008792421957398E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1623216.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.38910932582009 #Duplication Level Percentage of deduplicated Percentage of total 1 78.60144307809243 45.10866809975872 2 12.759794947405068 14.645465344233525 3 3.868883175687341 6.660952786150405 4 1.6110792735211517 3.6983361824267265 5 0.8242995626340495 2.3652908858615573 6 0.5364890143974993 1.847317601961573 7 0.36017948729379606 1.4469265981255042 8 0.24018704576812552 1.1027296502586166 9 0.17958028176472107 0.9275357180661439 >10 0.8899861361750219 9.025873975242506 >50 0.06266751767065785 2.4891733176597017 >100 0.05677569942848621 6.736221707612666 >500 0.0065840198733487275 2.5003827757197663 >1k 0.0020507602884200955 1.4451253569227107 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 6.160609555351845E-5 0.0 9 0.0 0.0 0.0 6.160609555351845E-5 0.0 10 0.0 0.0 0.0 6.160609555351845E-5 0.0 11 0.0 0.0 0.0 6.160609555351845E-5 0.0 12 0.0 0.0 0.0 6.160609555351845E-5 6.160609555351845E-5 13 0.0 0.0 0.0 6.160609555351845E-5 1.232121911070369E-4 14 0.0 0.0 0.0 6.160609555351845E-5 1.232121911070369E-4 15 0.0 0.0 0.0 6.160609555351845E-5 2.464243822140738E-4 16 0.0 0.0 0.0 1.232121911070369E-4 3.696365733211107E-4 17 0.0 0.0 0.0 1.232121911070369E-4 3.696365733211107E-4 18 0.0 0.0 0.0 1.8481828666055535E-4 4.312426688746291E-4 19 0.0 0.0 0.0 2.464243822140738E-4 4.312426688746291E-4 20 0.0 0.0 0.0 2.464243822140738E-4 4.312426688746291E-4 21 0.0 0.0 0.0 3.0803047776759224E-4 4.928487644281476E-4 22 0.0 0.0 0.0 4.312426688746291E-4 4.928487644281476E-4 23 0.0 0.0 0.0 5.54454859981666E-4 4.928487644281476E-4 24 0.0 0.0 0.0 0.001108909719963332 5.54454859981666E-4 25 0.0 0.0 0.0 0.0014169401977309243 5.54454859981666E-4 26 0.0 0.0 0.0 0.0016633645799449981 6.160609555351845E-4 27 0.0 0.0 0.0 0.0019713950577125903 6.160609555351845E-4 28 0.0 0.0 0.0 0.003634759637657588 6.160609555351845E-4 29 0.0 0.0 0.0 0.006591852224226474 6.160609555351845E-4 30 0.0 0.0 0.0 0.012013188632936097 6.160609555351845E-4 31 0.0 0.0 0.0 0.027969167381297375 6.776670510887029E-4 32 0.0 0.0 0.0 0.04460281318074735 7.392731466422214E-4 33 0.0 0.0 0.0 0.06025076145134104 7.392731466422214E-4 34 0.0 0.0 0.0 0.08051916688844861 9.240914333027767E-4 35 0.0 0.0 0.0 0.10275896738326877 9.240914333027767E-4 36 0.0 0.0 0.0 0.1343012883066702 9.240914333027767E-4 37 0.0 0.0 0.0 0.18192280016954 9.240914333027767E-4 38 0.0 0.0 0.0 0.24858059555844694 9.856975288562951E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCGTA 400 0.0 22.000154 10 ACCGTCG 385 0.0 21.7131 8 TACCGTC 420 0.0 21.47502 7 GTATCAA 2835 0.0 20.876213 1 ATTAGAC 130 1.6279955E-9 20.305958 3 ATACCGT 435 0.0 20.228157 6 CCGTCGT 455 0.0 18.373755 9 TAGGACG 185 2.1827873E-11 17.836315 4 GTCGTAG 485 0.0 17.690845 11 GGTATCA 1515 0.0 17.426939 1 CGTCTTA 190 3.274181E-11 17.368008 15 TATAGGA 230 0.0 17.21592 2 GTACTAA 90 2.2147984E-4 17.112286 1 CGCAATA 465 0.0 17.033426 36 GTATATG 210 9.094947E-12 16.763056 1 AAGACGG 595 0.0 16.637234 5 AACGCAG 3520 0.0 16.623579 6 CAAGACG 590 0.0 16.405378 4 CGCTAGA 565 0.0 16.3546 37 GTAATAC 175 3.6325218E-9 16.341461 3 >>END_MODULE