##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064182_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 668123 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.125617588378187 32.0 32.0 32.0 32.0 32.0 2 31.31271038416579 32.0 32.0 32.0 32.0 32.0 3 31.396584161898332 32.0 32.0 32.0 32.0 32.0 4 31.514584889309305 32.0 32.0 32.0 32.0 32.0 5 31.417254008618173 32.0 32.0 32.0 32.0 32.0 6 35.00287970927509 36.0 36.0 36.0 36.0 36.0 7 35.02277275292124 36.0 36.0 36.0 36.0 36.0 8 34.96985734662629 36.0 36.0 36.0 36.0 36.0 9 35.104798068619104 36.0 36.0 36.0 36.0 36.0 10 34.92985573015747 36.0 36.0 36.0 32.0 36.0 11 35.10767478443341 36.0 36.0 36.0 36.0 36.0 12 34.99988924195096 36.0 36.0 36.0 36.0 36.0 13 35.046069361479844 36.0 36.0 36.0 36.0 36.0 14 34.99425105856257 36.0 36.0 36.0 36.0 36.0 15 34.95268984902481 36.0 36.0 36.0 36.0 36.0 16 34.973016944484776 36.0 36.0 36.0 36.0 36.0 17 34.92345421426893 36.0 36.0 36.0 32.0 36.0 18 34.91120497273705 36.0 36.0 36.0 32.0 36.0 19 34.91403229644841 36.0 36.0 36.0 32.0 36.0 20 34.90713985299114 36.0 36.0 36.0 32.0 36.0 21 34.90268109315201 36.0 36.0 36.0 32.0 36.0 22 34.89188368010082 36.0 36.0 36.0 32.0 36.0 23 34.842403270056565 36.0 36.0 36.0 32.0 36.0 24 34.80242709800441 36.0 36.0 36.0 32.0 36.0 25 34.77481990591553 36.0 36.0 36.0 32.0 36.0 26 34.71075535492716 36.0 36.0 36.0 32.0 36.0 27 34.715116827290785 36.0 36.0 36.0 32.0 36.0 28 34.68198071313216 36.0 36.0 36.0 32.0 36.0 29 34.63937179231968 36.0 36.0 36.0 32.0 36.0 30 34.61273897171628 36.0 36.0 36.0 32.0 36.0 31 34.59421543637923 36.0 36.0 36.0 32.0 36.0 32 34.55054234025771 36.0 36.0 36.0 32.0 36.0 33 34.50742752457257 36.0 36.0 36.0 32.0 36.0 34 34.468526004942206 36.0 36.0 36.0 32.0 36.0 35 34.41862950384884 36.0 36.0 36.0 32.0 36.0 36 34.381055584076584 36.0 36.0 36.0 32.0 36.0 37 34.36969091020666 36.0 36.0 36.0 32.0 36.0 38 34.30726378226764 36.0 36.0 36.0 32.0 36.0 39 34.30187106266361 36.0 36.0 36.0 32.0 36.0 40 34.265307435906266 36.0 36.0 36.0 32.0 36.0 41 34.24717454720164 36.0 36.0 36.0 32.0 36.0 42 34.15701300509038 36.0 36.0 36.0 32.0 36.0 43 34.142198367665834 36.0 36.0 36.0 32.0 36.0 44 34.04687759589177 36.0 36.0 36.0 32.0 36.0 45 33.98859790787026 36.0 36.0 36.0 32.0 36.0 46 33.93266060291294 36.0 36.0 36.0 32.0 36.0 47 33.88038430049557 36.0 36.0 36.0 32.0 36.0 48 33.7940933031792 36.0 36.0 36.0 32.0 36.0 49 33.7638309113741 36.0 36.0 36.0 27.0 36.0 50 33.14506011617621 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 1.0 20 9.0 21 32.0 22 94.0 23 265.0 24 708.0 25 1495.0 26 3052.0 27 5580.0 28 9392.0 29 13850.0 30 19565.0 31 27382.0 32 39647.0 33 62279.0 34 123519.0 35 361251.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.42777081733554 18.480797412212358 12.29648190808923 25.79494986236287 2 15.598199131296381 21.161404653641103 37.37970011464972 25.8606961004128 3 17.989828205028424 25.448645606640703 29.097679765072847 27.463846423258026 4 12.21781019363201 16.161694777757987 36.0408188312631 35.57967619734689 5 14.051903616549646 37.332347486914834 32.85173538405354 15.764013512481984 6 33.15482248697839 36.2123570616057 17.01969706040831 13.613123391007603 7 29.34773986227087 31.05760466261452 21.012747652752562 18.58190782236205 8 28.008208081757523 32.72336489443545 19.61842298262892 19.650004041178107 9 28.10440103215609 13.602727670045322 18.675499464164904 39.61737183363368 10 16.33895362325348 26.56324135814942 31.156911609528297 25.9408934090688 11 37.00396483880962 20.96440326107618 23.00175267128957 19.029879228824633 12 25.32411745160315 23.74835733593565 28.925405839053347 22.00211937340785 13 29.908893475563485 19.547715302214126 25.560566306301723 24.982824915920666 14 23.944351314135183 19.797192121175836 25.549751541639225 30.708705023049752 15 24.971336368834326 27.63982313866013 22.931952689292228 24.45688780321332 16 25.03633345656524 25.53145631678284 24.731895760772442 24.70031446587948 17 23.3648594644998 25.845390743919904 25.752743132626776 25.037006658953516 18 24.242465062466227 24.394383652063027 27.71728474333242 23.645866542138325 19 25.756784304686413 24.0261149518876 26.40890973668022 23.808191006745762 20 26.221975426533294 23.49641306413977 25.958998322155185 24.322613187171747 21 27.152485395653198 23.36949932871642 25.100767373672213 24.37724790195817 22 26.14728126407862 23.944842491577152 25.79210714194841 24.115769102395817 23 24.15059660298511 23.85034934053368 26.42116039729628 25.57789365918493 24 24.715994982952218 24.507051107432474 26.408350570704155 24.368603338911157 25 24.767253198584662 24.047160039993535 26.568009962461158 24.61757679896065 26 24.091483995539555 25.17800612188386 26.90111436247839 23.82939552009819 27 24.765748019710095 24.69509822118177 25.928326378120115 24.61082738098802 28 24.01697964657668 24.676018644083015 26.61721254793487 24.689789161405432 29 24.15480846516181 24.46359318847543 26.49127454898421 24.890323797378546 30 24.018781675742183 24.887516502070056 26.582477420977163 24.5112244012106 31 24.867866631740448 24.49260936272125 25.688882236275866 24.950641769262432 32 24.256094932464794 25.13905187278475 25.459514800268224 25.14533839448223 33 23.9895104267077 24.622357399879057 26.286050424193075 25.10208174922017 34 24.806092482884353 24.63785469883341 26.41512822892313 24.14092458935911 35 25.23686502959129 24.616750136955133 26.235065903110605 23.911318930342972 36 24.161219489195204 25.415704336137875 25.80263230766237 24.62044386700455 37 25.06784133584193 25.241916291350286 25.356569271504544 24.33367310130324 38 24.473257213337565 25.30221474460684 25.770580240334816 24.453947801720783 39 25.19016671206919 24.760888372663892 25.339845352029194 24.70909956323773 40 25.46239127799157 25.062901977689066 25.85544444494337 23.619262299375997 41 24.316791847902554 25.25168463309275 26.432499423737237 23.99902409526746 42 25.426915149818818 25.882530792223402 25.560576374742368 23.129977683215415 43 24.35388343483903 24.96186988012399 25.964104552115153 24.720142132921822 44 24.02313990211193 25.713430423133914 25.1256529613387 25.137776713415455 45 24.28791666043017 25.95156486207361 25.091227492478787 24.669290985017437 46 24.234151306287092 25.319742858639604 25.241911946296668 25.204193888776633 47 24.72680192484714 25.262346487453318 25.32072054542325 24.69013104227629 48 25.147132781722608 25.78296193407014 24.335133452276892 24.73477183193036 49 24.63109116789075 25.933553753148765 24.547273764104897 24.888081314855587 50 24.58068282169104 26.48935055604616 24.29046115160677 24.63950547065603 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 212.0 1 126.0 2 40.0 3 140.5 4 241.0 5 274.0 6 307.0 7 268.0 8 229.0 9 327.0 10 425.0 11 669.5 12 914.0 13 1573.0 14 2232.0 15 2952.5 16 3673.0 17 3921.0 18 4169.0 19 4133.5 20 4098.0 21 4171.5 22 4245.0 23 4365.5 24 4486.0 25 4381.0 26 4276.0 27 5091.0 28 5906.0 29 7040.5 30 8175.0 31 9891.5 32 11608.0 33 14109.0 34 16610.0 35 19245.0 36 21880.0 37 24179.0 38 26478.0 39 27653.0 40 28828.0 41 30730.5 42 32633.0 43 33145.0 44 33657.0 45 36785.0 46 39913.0 47 42658.5 48 45404.0 49 47125.0 50 48846.0 51 47142.5 52 45439.0 53 45429.0 54 45419.0 55 45898.5 56 46378.0 57 45255.5 58 44133.0 59 40334.5 60 36536.0 61 32743.0 62 28950.0 63 25109.5 64 21269.0 65 18372.5 66 15476.0 67 13353.5 68 11231.0 69 10141.0 70 9051.0 71 7125.5 72 5200.0 73 4396.5 74 3593.0 75 2794.5 76 1996.0 77 1749.5 78 1503.0 79 1293.5 80 1084.0 81 854.5 82 625.0 83 510.0 84 395.0 85 283.0 86 171.0 87 126.5 88 82.0 89 63.5 90 45.0 91 27.5 92 10.0 93 14.5 94 19.0 95 16.5 96 14.0 97 13.0 98 12.0 99 9.5 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009279728433237593 2 1.4967303924576762E-4 3 1.4967303924576762E-4 4 0.0 5 0.0 6 4.4901911773730286E-4 7 0.0 8 1.4967303924576762E-4 9 0.0010477112747203734 10 0.001197384313966141 11 0.0 12 1.4967303924576762E-4 13 5.986921569830705E-4 14 4.4901911773730286E-4 15 0.004340518138127261 16 8.980382354746057E-4 17 0.0 18 2.9934607849153524E-4 19 0.0 20 5.986921569830705E-4 21 0.0 22 0.0 23 0.0010477112747203734 24 1.4967303924576762E-4 25 0.0022450955886865144 26 0.004190845098881494 27 0.005837248530584937 28 0.004340518138127261 29 0.002993460784915352 30 0.0037418259811441905 31 0.007184305883796846 32 0.004041172059635726 33 0.004639864216618796 34 0.0031431338241611198 35 0.0031431338241611198 36 0.005986921569830704 37 0.002993460784915352 38 0.00823201715851722 39 0.0037418259811441905 40 0.002993460784915352 41 0.0037418259811441905 42 0.002394768627932282 43 0.002394768627932282 44 0.001945749510194979 45 0.001945749510194979 46 0.001197384313966141 47 0.002694114706423817 48 0.0028437877456695846 49 5.986921569830705E-4 50 0.001945749510194979 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 668123.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.028351555390884 #Duplication Level Percentage of deduplicated Percentage of total 1 76.94581596851229 42.34201411831704 2 13.402424117881296 14.75026612106443 3 4.3072459335734665 7.110619304046255 4 1.8225271302904806 4.011626545794491 5 0.9377662527412348 2.5801865516313107 6 0.5691677366984003 1.8792217385415435 7 0.37111624005756483 1.4295340448061762 8 0.2737002692444627 1.204901970943155 9 0.19906363975890068 0.9858729555493627 >10 0.9941855812883948 9.807901022612135 >50 0.08999813547153011 3.513678987043152 >100 0.0812444382427283 8.366319051596918 >500 0.00547100594225351 1.8656715364670882 >1k 2.735502971126755E-4 0.15218605158691514 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1011 0.15131944267747108 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 906 0.13560377355666547 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 846 0.12662339120191943 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA 690 0.10327439707957967 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 676 0.10117897453013891 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 672 0.10058028237315583 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 1.4967303924576762E-4 13 0.0 0.0 0.0 0.0 1.4967303924576762E-4 14 0.0 0.0 0.0 0.0 1.4967303924576762E-4 15 0.0 0.0 0.0 0.0 1.4967303924576762E-4 16 0.0 0.0 0.0 1.4967303924576762E-4 4.4901911773730286E-4 17 0.0 0.0 0.0 1.4967303924576762E-4 4.4901911773730286E-4 18 0.0 0.0 0.0 1.4967303924576762E-4 4.4901911773730286E-4 19 0.0 0.0 0.0 1.4967303924576762E-4 4.4901911773730286E-4 20 0.0 0.0 0.0 1.4967303924576762E-4 4.4901911773730286E-4 21 0.0 0.0 0.0 4.4901911773730286E-4 4.4901911773730286E-4 22 0.0 0.0 0.0 4.4901911773730286E-4 4.4901911773730286E-4 23 0.0 0.0 0.0 0.0025444416671780495 4.4901911773730286E-4 24 0.0 0.0 0.0 0.005687575491339169 4.4901911773730286E-4 25 0.0 0.0 0.0 0.006884959805305311 4.4901911773730286E-4 26 0.0 0.0 0.0 0.008082344119271452 7.48365196228838E-4 27 0.0 0.0 0.0 0.009728747550974895 7.48365196228838E-4 28 0.0 0.0 0.0 0.015266650003068297 7.48365196228838E-4 29 0.0 0.0 0.0 0.023498667161585517 0.0010477112747203734 30 0.0 0.0 0.0 0.04086073971409456 0.0010477112747203734 31 0.0 0.0 0.0 0.0730404431519346 0.0010477112747203734 32 0.0 0.0 0.0 0.11255412551281725 0.0010477112747203734 33 0.0 0.0 0.0 0.1469789245393438 0.0010477112747203734 34 0.0 0.0 0.0 0.1821520887620992 0.0010477112747203734 35 0.0 0.0 0.0 0.22391086671166835 0.0010477112747203734 36 0.0 0.0 0.0 0.27435068093749204 0.0010477112747203734 37 0.0 0.0 0.0 0.35562314124794386 0.0010477112747203734 38 0.0 0.0 0.0 0.46952432411397305 0.001197384313966141 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAACGG 25 0.002350825 35.203712 35 GTACTAA 30 0.0057465415 29.32984 1 TGTAGGA 420 0.0 23.044876 2 TTGAATC 50 0.002578782 22.000675 41 CCGCGTT 50 0.002579903 21.999027 9 GCATATA 50 0.0025810245 21.99738 1 GTAGGAC 410 0.0 21.46086 3 AATCGCT 135 1.1277734E-10 21.185833 15 CGAACGT 125 9.949872E-10 21.117485 4 CTGTAGG 465 0.0 20.814726 1 GGTATAT 65 4.932946E-4 20.305275 1 CCCTTAC 65 4.932946E-4 20.305275 1 TACTAAA 65 4.932946E-4 20.305275 2 TAGGACG 370 0.0 20.213808 4 GACGGTA 200 0.0 19.797642 8 ACGACGG 200 0.0 19.797642 6 AAATCGC 145 2.9467628E-10 19.724741 14 CAAATCG 145 2.9467628E-10 19.724741 13 GTATATG 90 1.0018895E-5 19.553228 1 TATATGA 80 8.989118E-5 19.24771 2 >>END_MODULE