SRR4064180_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4064180_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	893548
Sequences flagged as poor quality	0
Sequence length	25
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	3304	0.3697618930376432	No Hit
TATCAACGCAGAGTACTTTTTTTTT	2404	0.26903982774288565	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	2210	0.24732862700157127	No Hit
GTACATGGGGTGGTATCAACGCAAA	1527	0.17089177078343862	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	1416	0.1584693827304185	No Hit
GGTATCAACGCAGAGTACTTTTTTT	1253	0.1402274975714791	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	1246	0.13944410373029764	No Hit
GTATCAACGCAGAGTACATGGGGTG	915	0.1024007663830035	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	894	0.10005058485945914	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCGCG	45	6.747315E-4	14.78096	13
CGCGCTA	45	6.753052E-4	14.779304	16
ATGACCG	45	6.764538E-4	14.7759905	5
TCTAATC	40	0.005292795	14.24349	3
ACGCCCC	55	1.9569659E-4	13.819609	17
CTAGAAC	90	3.653622E-8	13.715953	3
GTGTAAT	85	2.715242E-7	13.403385	1
CACGCGC	50	0.0014962453	13.302863	12
ACCGGCG	50	0.0014968773	13.302117	8
GCGTTAT	50	0.0015057505	13.291691	1
TTAGGCA	65	5.4593333E-5	13.150783	4
TAAGGCT	75	1.48045565E-5	12.663716	4
TCTATAC	60	4.1047888E-4	12.660879	3
TCGGCGT	55	0.003061744	12.093513	13
ATTACAC	55	0.0030772004	12.085384	3
GTACTAT	55	0.003081075	12.083356	1
AATACTG	95	1.0396307E-6	11.998549	5
GTTATTC	95	1.0438616E-6	11.994518	3
ACAATAC	80	2.8765797E-5	11.8695755	3
GCATTAG	80	2.8815302E-5	11.867581	1