FastQCFastQC Report
Thu 2 Feb 2017
SRR4064179_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4064179_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3176
Sequences flagged as poor quality0
Sequence length25
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATCAACGCAGAGTACTTTTTTTTT270.850125944584383No Hit
GTATCAACGCAGAGTACTTTTTTTT220.6926952141057935No Hit
GAGTACTTTTTTTTTTTTTTTTTTT100.3148614609571789No Hit
ACGCAGAGTACTTTTTTTTTTTTTT100.3148614609571789No Hit
GCAGAGTACTTTTTTTTTTTTTTTT90.28337531486146095No Hit
TTGTAGAACAGTGTATATCAATGAG70.2204030226700252No Hit
CTGAAGGACCTGGAATATGGCGAGA50.15743073047858944No Hit
GCATATGCTTGTCTCAAAGATTAAG50.15743073047858944No Hit
GTACTTTTTTTTTTTTTTTTTTTTT50.15743073047858944No Hit
CTTTAGGACGTGAAATATGGCGAGG50.15743073047858944No Hit
GTGTATATCAATGAGTTACAATGAA50.15743073047858944No Hit
GGTATCAACGCAGAGTACTTTTTTT50.15743073047858944No Hit
GTTCTATTTTGTTGGTTTTCGGAAC40.12594458438287154No Hit
CTGTAGGACCTGGAATATGGCGAGA40.12594458438287154No Hit
GATATACACTGTTCTACAAATCCCG40.12594458438287154No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)