##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064177_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 923166 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.03304714428391 32.0 32.0 32.0 21.0 32.0 2 28.25975068405899 32.0 32.0 32.0 14.0 32.0 3 28.441890190929907 32.0 32.0 32.0 14.0 32.0 4 28.38205804806503 32.0 27.0 32.0 14.0 32.0 5 28.27774853060013 32.0 21.0 32.0 14.0 32.0 6 31.59602823327549 36.0 32.0 36.0 21.0 36.0 7 31.46765153829322 36.0 32.0 36.0 21.0 36.0 8 31.129583411867422 36.0 32.0 36.0 14.0 36.0 9 31.915176685449854 36.0 32.0 36.0 21.0 36.0 10 30.38838410426727 36.0 21.0 36.0 14.0 36.0 11 32.058111975527694 36.0 32.0 36.0 21.0 36.0 12 31.146784002010474 36.0 32.0 36.0 14.0 36.0 13 31.626653277958678 36.0 32.0 36.0 21.0 36.0 14 31.0091402846292 36.0 32.0 36.0 14.0 36.0 15 30.923496965876126 36.0 32.0 36.0 14.0 36.0 16 31.068623627819914 36.0 32.0 36.0 14.0 36.0 17 30.69421317509527 36.0 27.0 36.0 14.0 36.0 18 30.90807720388316 36.0 32.0 36.0 14.0 36.0 19 30.902631812696743 36.0 32.0 36.0 14.0 36.0 20 30.781797639861086 36.0 32.0 36.0 14.0 36.0 21 30.73384418403624 36.0 32.0 36.0 14.0 36.0 22 30.7692061882695 36.0 32.0 36.0 14.0 36.0 23 30.516951447518647 36.0 27.0 36.0 14.0 36.0 24 30.497740384719542 36.0 27.0 36.0 14.0 36.0 25 29.502727570122815 36.0 21.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 3.0 4 6.0 5 14.0 6 35.0 7 34.0 8 64.0 9 63.0 10 60.0 11 41.0 12 49.0 13 31.0 14 403.0 15 1127.0 16 1720.0 17 2553.0 18 3912.0 19 5937.0 20 8536.0 21 11758.0 22 15474.0 23 20070.0 24 25119.0 25 31642.0 26 38817.0 27 47313.0 28 56786.0 29 66549.0 30 77527.0 31 91221.0 32 106868.0 33 113075.0 34 126627.0 35 69732.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.841117586249496 18.091750953030083 11.785064897068416 26.282066563652005 2 16.18410134305108 19.877437651794672 38.05954142572705 25.878919579427205 3 18.143392727347567 24.324898148418956 28.955854746267427 28.575854377966042 4 12.094872364280414 15.526439794829574 36.584464894083744 35.794222946806265 5 14.169444447453634 36.833427400528 34.007944976649306 14.989183175369055 6 33.62139569953979 36.08612187237288 16.97401263617691 13.31846979191042 7 29.809098690126657 30.54951841298389 21.411066208734656 18.2303166881548 8 27.606996997354944 33.46665178527891 19.530087673768197 19.396263543597954 9 27.09955968715355 13.906321626697501 18.945589989953977 40.04852869619497 10 15.52034889707038 26.47973997457404 32.06293846505665 25.936972663298935 11 36.645475373520924 20.789395538774 23.434116609190795 19.131012478514283 12 24.711504382575484 23.514059250122745 29.359408040700995 22.415028326600776 13 29.17589319875874 19.544206604950514 25.742485186064336 25.53741501022641 14 23.14699299259155 20.047691565638225 25.447677474948378 31.357637966821844 15 24.544843656857964 28.146317671923267 22.280604779710618 25.028233891508155 16 25.086278284319462 25.631587390363713 24.652393897220453 24.629740428096373 17 23.25965281932558 26.45355894874663 25.831859289510877 24.454928942416913 18 24.185339636488198 24.745122227509782 27.328208858310184 23.74132927769184 19 25.39297123215356 24.86116877302788 25.693234748618732 24.052625246199824 20 25.55583258355104 24.320914047848756 25.3256945874752 24.797558781124998 21 26.300442694670757 24.334982417954066 24.371512316103942 24.993062571271242 22 25.54170555542909 24.7576430645754 24.999485096525433 24.70116628347008 23 23.454191066949097 24.6009049695272 26.041289505692376 25.903614457831324 24 24.487141269884287 25.19964228611691 25.59226037234763 24.720956071651177 25 24.113186112761188 24.844772339991934 25.92095963647243 25.121081910774446 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 80.0 1 80.0 2 241.5 3 403.0 4 403.0 5 403.0 6 996.5 7 1590.0 8 1590.0 9 1590.0 10 1653.0 11 1716.0 12 1716.0 13 1716.0 14 2085.5 15 2455.0 16 2455.0 17 2455.0 18 4235.0 19 6015.0 20 6015.0 21 6015.0 22 10102.0 23 14189.0 24 14189.0 25 14189.0 26 21620.5 27 29052.0 28 29052.0 29 29052.0 30 36536.5 31 44021.0 32 44021.0 33 44021.0 34 53713.5 35 63406.0 36 63406.0 37 63406.0 38 71908.0 39 80410.0 40 80410.0 41 80410.0 42 90167.5 43 99925.0 44 99925.0 45 99925.0 46 111283.0 47 122641.0 48 122641.0 49 122641.0 50 123078.0 51 123515.0 52 123515.0 53 123515.0 54 112577.0 55 101639.0 56 101639.0 57 101639.0 58 92842.0 59 84045.0 60 84045.0 61 84045.0 62 73815.5 63 63586.0 64 63586.0 65 63586.0 66 52020.5 67 40455.0 68 40455.0 69 40455.0 70 30462.0 71 20469.0 72 20469.0 73 20469.0 74 15794.5 75 11120.0 76 11120.0 77 11120.0 78 9292.0 79 7464.0 80 7464.0 81 7464.0 82 5049.5 83 2635.0 84 2635.0 85 2635.0 86 2000.5 87 1366.0 88 1366.0 89 1366.0 90 931.0 91 496.0 92 496.0 93 496.0 94 296.0 95 96.0 96 96.0 97 96.0 98 236.5 99 377.0 100 377.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03466332165612685 2 0.004766206727717442 3 9.749059215785676E-4 4 0.0033580092854372887 5 0.007257632971751559 6 0.011048933777890435 7 0.01906482691086977 8 0.03390506149489907 9 0.04473734951243872 10 0.05275324264541805 11 0.049828524880682346 12 0.05795274089383708 13 0.06011919849734501 14 0.061852364580151344 15 0.05589460617050454 16 0.06174404169997595 17 0.05784441801366168 18 0.07203471531663862 19 0.06965161195277988 20 0.07322626699856796 21 0.06867670603120132 22 0.07181806955628782 23 0.07625930764347907 24 0.0694349661924291 25 0.07040987211400768 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 923166.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.07473680957897 #Duplication Level Percentage of deduplicated Percentage of total 1 80.2546867469673 43.39751063577462 2 11.70296221820083 12.656692036833128 3 3.35897820688919 5.449075874599334 4 1.494892334273831 3.233436381380582 5 0.7633761271763995 2.063968158188974 6 0.4872649939158451 1.5809235781512256 7 0.3403686586985847 1.2883741946148766 8 0.23710152770360865 1.0256962166177388 9 0.17595624645597654 0.8563308945397509 >10 0.9860478835977144 9.80072231147218 >50 0.09347975098118383 3.593814002062581 >100 0.09367618859385597 10.366338806394756 >500 0.009607814182009289 3.6044171485068146 >1k 0.0016013023636682147 1.0826997608634477 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 1969 0.2132877510653555 No Hit TATCAACGCAGAGTACTTTTTTTTT 1528 0.1655173609080057 No Hit GTATCTGATCGTCTTCGAACCTCCG 1133 0.12272982323872414 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1112 0.1204550427550408 No Hit CTATTGGAGCTGGAATTACCGCGGC 1087 0.1177469707506559 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1087 0.1177469707506559 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1047 0.11341405554364005 No Hit GAATAGGACCGCGGTTCTATTTTGT 1040 0.11265579538241226 No Hit GCGCAAGACGGACCAGAGCGAAAGC 982 0.10637306833223928 No Hit GAACTACGACGGTATCTGATCGTCT 974 0.1055064852908361 No Hit GTCCTATTCCATTATTCCTAGCTGC 966 0.10463990224943293 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.083228801753964E-4 2 0.0 0.0 0.0 0.0 1.083228801753964E-4 3 0.0 0.0 0.0 0.0 1.083228801753964E-4 4 0.0 0.0 0.0 0.0 1.083228801753964E-4 5 0.0 0.0 0.0 0.0 1.083228801753964E-4 6 0.0 0.0 0.0 0.0 1.083228801753964E-4 7 0.0 0.0 0.0 0.0 1.083228801753964E-4 8 0.0 0.0 0.0 0.0 1.083228801753964E-4 9 0.0 0.0 0.0 0.0 1.083228801753964E-4 10 0.0 0.0 0.0 0.0 1.083228801753964E-4 11 0.0 0.0 0.0 0.0 1.083228801753964E-4 12 0.0 0.0 0.0 0.0 2.166457603507928E-4 13 0.0 0.0 0.0 0.0 2.166457603507928E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAGTAC 45 3.5501558E-5 16.88123 3 CGCCAGT 155 0.0 14.099549 18 TTTTCGG 85 2.688539E-7 13.414406 16 TATACTG 50 0.001500192 13.298293 5 CTAGAAC 50 0.0015038729 13.29397 3 ATTAGCT 80 2.0070875E-6 13.056577 3 CGGTTCT 165 0.0 12.668474 12 CAAGACG 225 0.0 12.662294 4 GTGTAAT 75 1.483945E-5 12.660923 1 CGCATCG 175 0.0 12.487496 13 TCTAGAT 145 7.2759576E-12 12.441957 2 CGAACGA 100 1.4362558E-7 12.352432 16 CTTATAC 70 1.0945989E-4 12.208748 3 CCTATAC 70 1.0945989E-4 12.208748 3 TAACACT 55 0.0030747603 12.086736 4 CTCGCGG 95 1.0364529E-6 12.001712 14 CTAGGAC 95 1.0439435E-6 11.994558 3 CGCAAGA 230 0.0 11.97218 2 GTCTTCG 255 0.0 11.92327 11 GCCGGTC 160 3.6379788E-12 11.876694 8 >>END_MODULE