FastQCFastQC Report
Thu 2 Feb 2017
SRR4064175_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4064175_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4627
Sequences flagged as poor quality0
Sequence length25
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTACTTTTTTTT310.6699805489518046No Hit
TATCAACGCAGAGTACTTTTTTTTT210.45385779122541603No Hit
ACGCAGAGTACTTTTTTTTTTTTTT120.2593473092716663No Hit
GAGTACTTTTTTTTTTTTTTTTTTT90.19451048195374973No Hit
GTATCTGATCGTCTTCGAACCTCCG80.17289820618111088No Hit
GGTATCAACGCAGAGTACTTTTTTT80.17289820618111088No Hit
GTCAATCCTGTCCGTGTCCGGGCCG70.15128593040847202No Hit
GTACATGGGTACCTGGTTGATCCTG60.12967365463583316No Hit
GTATCAACGCAGAGTACATGGGAAT60.12967365463583316No Hit
GTACTTTTTTTTTTTTTTTTTTTTT50.1080613788631943No Hit
GTCCTGTATTGTTATTTTTCGTCAC50.1080613788631943No Hit
CTCCTGGTGGTGCCCTTCCGTCAAT50.1080613788631943No Hit
GCTTTGAACACTCTAATTTTTTCAA50.1080613788631943No Hit
ATCCTGTCCGTGTCCGGGCCGGGTG50.1080613788631943No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)