##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064173_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 920250 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.169388753056236 32.0 32.0 32.0 32.0 32.0 2 30.83150230915512 32.0 32.0 32.0 32.0 32.0 3 30.83921108394458 32.0 32.0 32.0 32.0 32.0 4 30.85664330345015 32.0 32.0 32.0 32.0 32.0 5 30.811950013583264 32.0 32.0 32.0 32.0 32.0 6 34.32087150230915 36.0 36.0 36.0 32.0 36.0 7 34.20716870415648 36.0 36.0 36.0 32.0 36.0 8 34.12460092366205 36.0 36.0 36.0 32.0 36.0 9 34.34731323010052 36.0 36.0 36.0 32.0 36.0 10 33.981951643575115 36.0 36.0 36.0 32.0 36.0 11 34.27885574572127 36.0 36.0 36.0 32.0 36.0 12 34.10493561532192 36.0 36.0 36.0 32.0 36.0 13 34.19675957620212 36.0 36.0 36.0 32.0 36.0 14 34.067713121434394 36.0 36.0 36.0 32.0 36.0 15 34.08874870958979 36.0 36.0 36.0 32.0 36.0 16 34.09571312143439 36.0 36.0 36.0 32.0 36.0 17 33.95907525129041 36.0 36.0 36.0 32.0 36.0 18 34.01618038576474 36.0 36.0 36.0 32.0 36.0 19 34.015301276826946 36.0 36.0 36.0 32.0 36.0 20 33.90813583265417 36.0 36.0 36.0 32.0 36.0 21 33.84732953001902 36.0 36.0 36.0 32.0 36.0 22 33.89977180114099 36.0 36.0 36.0 32.0 36.0 23 33.78625808204292 36.0 36.0 36.0 32.0 36.0 24 33.75227492529204 36.0 36.0 36.0 32.0 36.0 25 33.182834012496606 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 3.0 4 9.0 5 15.0 6 40.0 7 13.0 8 47.0 9 54.0 10 75.0 11 28.0 12 53.0 13 49.0 14 174.0 15 349.0 16 532.0 17 725.0 18 933.0 19 1193.0 20 1561.0 21 2052.0 22 2628.0 23 3587.0 24 4784.0 25 6754.0 26 9188.0 27 12497.0 28 17363.0 29 24346.0 30 33553.0 31 49140.0 32 74958.0 33 112803.0 34 235712.0 35 325032.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.58532096528198 17.533267311449 11.68359066286769 25.197821060401328 2 16.071257802583762 20.151313616052022 38.25917618625354 25.518252395110668 3 18.7783963409267 25.063652357609435 28.48365576978874 27.67429553167513 4 12.052018504451697 15.587729335989245 36.03217088254759 36.32808127701147 5 14.187905634213033 37.14522628574906 33.48468316517491 15.182184914863003 6 33.50120907485396 35.67884798261105 17.354707240864013 13.465235701670968 7 29.590902865788575 30.612069658900943 21.26092088701841 18.53610658829207 8 28.125669201979697 32.857069870937096 19.780007152648167 19.237253774435047 9 27.58636809873311 13.970557058880445 18.73456887432554 39.7085059680609 10 16.013551567497984 26.570487939061437 31.365724884913877 26.0502356085267 11 37.023003677022196 20.951742073527395 22.917133270853675 19.10812097859673 12 24.998994216472887 23.558929672353784 29.250903302340703 22.191172808832626 13 29.77905118140202 19.22939750127763 25.790120369262887 25.201430948057457 14 23.684840049583542 20.08176934954222 25.382097731770436 30.851292869103798 15 24.983554866943926 27.606947728940717 23.022968822202287 24.386528581913073 16 25.33808285789157 25.404519659747887 24.91847628119186 24.338921201168677 17 23.344032427824605 25.747196924227794 26.146238354948988 24.762532292998618 18 24.58661980331748 24.389241294411523 27.629185049692623 23.394953852578375 19 25.4362251167363 24.653705874548987 25.8696772706216 24.040391738093113 20 25.51378391604589 24.016421075526072 25.834919253982925 24.63487575444511 21 27.02440244459427 23.94451814959003 24.41527653928968 24.615802866526025 22 25.55318119287256 24.427189533954294 25.327961111201734 24.691668161971407 23 23.88177219897924 24.11069772803647 25.98147062629892 26.026059446685363 24 24.49782556921802 25.23775190283084 25.734298587027798 24.530123940923342 25 24.566148371928133 24.484804590051265 25.850466639262077 25.09858039875853 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 203.0 1 203.0 2 499.5 3 796.0 4 796.0 5 796.0 6 2236.5 7 3677.0 8 3677.0 9 3677.0 10 3281.0 11 2885.0 12 2885.0 13 2885.0 14 2517.0 15 2149.0 16 2149.0 17 2149.0 18 3940.5 19 5732.0 20 5732.0 21 5732.0 22 9954.0 23 14176.0 24 14176.0 25 14176.0 26 22262.5 27 30349.0 28 30349.0 29 30349.0 30 37851.0 31 45353.0 32 45353.0 33 45353.0 34 53024.5 35 60696.0 36 60696.0 37 60696.0 38 66761.5 39 72827.0 40 72827.0 41 72827.0 42 84036.5 43 95246.0 44 95246.0 45 95246.0 46 110309.5 47 125373.0 48 125373.0 49 125373.0 50 123889.0 51 122405.0 52 122405.0 53 122405.0 54 109983.0 55 97561.0 56 97561.0 57 97561.0 58 90333.5 59 83106.0 60 83106.0 61 83106.0 62 74035.5 63 64965.0 64 64965.0 65 64965.0 66 54128.5 67 43292.0 68 43292.0 69 43292.0 70 32692.5 71 22093.0 72 22093.0 73 22093.0 74 17307.5 75 12522.0 76 12522.0 77 12522.0 78 10547.0 79 8572.0 80 8572.0 81 8572.0 82 5832.0 83 3092.0 84 3092.0 85 3092.0 86 2431.5 87 1771.0 88 1771.0 89 1771.0 90 1230.5 91 690.0 92 690.0 93 690.0 94 444.0 95 198.0 96 198.0 97 198.0 98 359.5 99 521.0 100 521.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.038359141537625645 2 0.004563977180114099 3 0.0018473240967128498 4 0.004237978810105949 5 0.009345286606900299 6 0.013583265417006248 7 0.024341211627275195 8 0.03379516435751155 9 0.04748709589785385 10 0.0547677261613692 11 0.0525944036946482 12 0.06183102417821244 13 0.063026351534909 14 0.06411301276826949 15 0.05704971475142624 16 0.06291768541157294 17 0.0593317033414833 18 0.07574028796522683 19 0.07128497690844879 20 0.07606628633523499 21 0.07280630263515349 22 0.07660961695191523 23 0.08008693289866885 24 0.07595762021189893 25 0.07563162184189079 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 920250.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.749582314521824 #Duplication Level Percentage of deduplicated Percentage of total 1 76.10207314644155 36.33842206011772 2 14.067650855218861 13.434489049664528 3 4.422910646183109 6.3357640790908585 4 1.8319203514393954 3.498937264588127 5 0.9914772685140889 2.3671312722945372 6 0.5484430833913141 1.5712756893134228 7 0.36578984823041055 1.2226418727526105 8 0.25919026081066526 0.9900981354960994 9 0.18701923242811752 0.8037081209902579 >10 0.9627038586025741 8.583886777953177 >50 0.1138677901776001 3.8555634721653376 >100 0.12778579006148505 12.855448362356922 >500 0.014604090286393322 4.734824285195809 >1k 0.0045637782144979135 3.4078095580205763 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3306 0.35925020374898126 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2959 0.3215430589513719 No Hit TATCAACGCAGAGTACTTTTTTTTT 2761 0.300027166530834 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1776 0.1929910350448248 No Hit GTACATGGAAGCAGTGGTATCAACG 1754 0.19060038033143167 No Hit TCCATGTACTCTGCGTTGATACCAC 1627 0.17679978266775334 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1560 0.16951915240423798 No Hit GTACATGGGGTGGTATCAACGCAAA 1418 0.1540885628905189 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1306 0.1419179570768813 No Hit GGTATCAACGCAGAGTACTTTTTTT 1284 0.13952730236348818 No Hit GAATAGGACCGCGGTTCTATTTTGT 1248 0.13561532192339038 No Hit GTCCTATTCCATTATTCCTAGCTGC 1248 0.13561532192339038 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1208 0.13126867698994837 No Hit GTATCTGATCGTCTTCGAACCTCCG 1207 0.13116001086661233 No Hit CTATTGGAGCTGGAATTACCGCGGC 1189 0.12920402064656342 No Hit GAACTACGACGGTATCTGATCGTCT 1144 0.12431404509644119 No Hit GAATAACGCCGCCGCATCGCCAGTC 1136 0.12344471610975277 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1061 0.11529475685954904 No Hit ATCAGATACCGTCGTAGTTCCGACC 1051 0.11420809562618854 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1033 0.11225210540613964 No Hit CTTTAATATACGCTATTGGAGCTGG 1000 0.10866612333604998 No Hit GTACATGGGGAATAATTGCAATCCC 962 0.10453681064928008 No Hit TCGTAGTTCCGACCATAAACGATGC 959 0.10421081227927192 No Hit GCTTTGAACACTCTAATTTTTTCAA 956 0.10388481390926378 No Hit CTCTTAATCATGGCCTCAGTTCCGA 930 0.1010594947025265 No Hit GCTCTTAGCTGAGTGTCCCGCGGGG 921 0.10008149959250204 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.0866612333604998E-4 0.0 5 0.0 0.0 0.0 1.0866612333604998E-4 0.0 6 0.0 0.0 0.0 1.0866612333604998E-4 0.0 7 0.0 0.0 0.0 1.0866612333604998E-4 0.0 8 0.0 0.0 0.0 1.0866612333604998E-4 0.0 9 0.0 0.0 0.0 1.0866612333604998E-4 0.0 10 0.0 0.0 0.0 1.0866612333604998E-4 0.0 11 0.0 0.0 0.0 2.1733224667209997E-4 0.0 12 0.0 0.0 0.0 3.2599837000814997E-4 1.0866612333604998E-4 13 0.0 0.0 0.0 3.2599837000814997E-4 2.1733224667209997E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATCCC 50 4.55834E-6 17.09995 5 TCGGCGT 75 3.274181E-9 16.467516 13 CTCGTAG 100 1.8189894E-12 16.150831 10 GTATTAA 50 8.768777E-5 15.187566 1 TATTAAC 45 6.800684E-4 14.765688 2 AACCGCG 150 0.0 14.567417 7 GTCGGCG 100 6.566552E-10 14.251509 12 CGTCTTA 75 9.631058E-7 13.937084 15 ATAATTC 50 0.0015030734 13.2949 3 GCTCGTA 115 3.7471182E-10 13.21951 9 TAGAACC 205 0.0 12.973454 4 CCGTCGT 170 0.0 12.855002 9 CGCGGTC 170 0.0 12.853604 10 GCGCCGA 120 7.348717E-10 12.670076 19 CGGCGTC 90 5.382881E-7 12.669387 14 CTAGACA 60 4.094931E-4 12.664565 4 CGTCGTA 175 0.0 12.486359 10 CGACCCG 160 0.0 12.468714 5 AGAACCG 200 0.0 12.349964 5 CGAACGA 85 3.9265306E-6 12.297427 16 >>END_MODULE