Basic Statistics
Measure | Value |
---|---|
Filename | SRR4064172_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1614007 |
Sequences flagged as poor quality | 0 |
Sequence length | 25 |
%GC | 51 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTT | 3802 | 0.2355627949568992 | No Hit |
TATCAACGCAGAGTACTTTTTTTTT | 2627 | 0.16276261503202896 | No Hit |
GTACTTTTTTTTTTTTTTTTTTTTT | 1746 | 0.10817796948836032 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGTTATT | 115 | 0.0 | 15.690505 | 2 |
TAGGACG | 90 | 3.6547135E-8 | 13.717723 | 4 |
GCGTTAT | 130 | 1.4551915E-11 | 13.1499405 | 1 |
CGAACGA | 145 | 0.0 | 13.106058 | 16 |
GCGCAAA | 80 | 1.997154E-6 | 13.063886 | 11 |
TTAGAAC | 80 | 2.0090065E-6 | 13.057003 | 3 |
GTTATTC | 150 | 1.8189894E-12 | 12.661335 | 3 |
GTATTAG | 255 | 0.0 | 12.290468 | 1 |
CGGTCCA | 290 | 0.0 | 12.121224 | 10 |
AAGACGG | 315 | 0.0 | 12.060658 | 5 |
CTATACT | 95 | 1.043969E-6 | 11.996066 | 4 |
CGACCAT | 235 | 0.0 | 11.72392 | 10 |
AGGCCCG | 285 | 0.0 | 11.66718 | 10 |
CGCATCG | 240 | 0.0 | 11.481097 | 13 |
GTATCAA | 2380 | 0.0 | 11.452481 | 1 |
GCTCGTA | 125 | 1.8293576E-8 | 11.400855 | 9 |
CACTCTA | 320 | 0.0 | 11.282097 | 9 |
CGACCCG | 160 | 4.5474735E-11 | 11.2786 | 5 |
GTCTTAA | 155 | 3.1468517E-10 | 11.028982 | 1 |
ACTCTAA | 320 | 0.0 | 10.984859 | 10 |