##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064165_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3028611 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.139866427216965 32.0 32.0 32.0 32.0 32.0 2 31.14214469933577 32.0 32.0 32.0 32.0 32.0 3 31.309026150931896 32.0 32.0 32.0 32.0 32.0 4 31.44757349161051 32.0 32.0 32.0 32.0 32.0 5 31.313232039373826 32.0 32.0 32.0 32.0 32.0 6 34.91598425813021 36.0 36.0 36.0 36.0 36.0 7 34.94072365186549 36.0 36.0 36.0 36.0 36.0 8 34.872274782070065 36.0 36.0 36.0 32.0 36.0 9 35.04528940824688 36.0 36.0 36.0 36.0 36.0 10 34.82588982209997 36.0 36.0 36.0 32.0 36.0 11 35.04126974378684 36.0 36.0 36.0 36.0 36.0 12 34.909671133070574 36.0 36.0 36.0 32.0 36.0 13 34.98399662419505 36.0 36.0 36.0 36.0 36.0 14 34.90819520895883 36.0 36.0 36.0 32.0 36.0 15 34.85889207957047 36.0 36.0 36.0 32.0 36.0 16 34.87629411634575 36.0 36.0 36.0 32.0 36.0 17 34.82645872976094 36.0 36.0 36.0 32.0 36.0 18 34.834438625495316 36.0 36.0 36.0 32.0 36.0 19 34.833584108358586 36.0 36.0 36.0 32.0 36.0 20 34.82099748036311 36.0 36.0 36.0 32.0 36.0 21 34.81833190198411 36.0 36.0 36.0 32.0 36.0 22 34.798991352801664 36.0 36.0 36.0 32.0 36.0 23 34.7431452900356 36.0 36.0 36.0 32.0 36.0 24 34.704588671176325 36.0 36.0 36.0 32.0 36.0 25 34.67429788771156 36.0 36.0 36.0 32.0 36.0 26 34.60120167297814 36.0 36.0 36.0 32.0 36.0 27 34.6088002057709 36.0 36.0 36.0 32.0 36.0 28 34.57059292196984 36.0 36.0 36.0 32.0 36.0 29 34.537228122066516 36.0 36.0 36.0 32.0 36.0 30 34.51768483968394 36.0 36.0 36.0 32.0 36.0 31 34.51886623934206 36.0 36.0 36.0 32.0 36.0 32 34.45979757717317 36.0 36.0 36.0 32.0 36.0 33 34.42699673216534 36.0 36.0 36.0 32.0 36.0 34 34.41138231354241 36.0 36.0 36.0 32.0 36.0 35 34.361187356184075 36.0 36.0 36.0 32.0 36.0 36 34.32780241503448 36.0 36.0 36.0 32.0 36.0 37 34.32793085675249 36.0 36.0 36.0 32.0 36.0 38 34.26335438919029 36.0 36.0 36.0 32.0 36.0 39 34.263440897493936 36.0 36.0 36.0 32.0 36.0 40 34.238534760654304 36.0 36.0 36.0 32.0 36.0 41 34.21465813866489 36.0 36.0 36.0 32.0 36.0 42 34.12996617921549 36.0 36.0 36.0 32.0 36.0 43 34.120864977377416 36.0 36.0 36.0 32.0 36.0 44 34.034393984569164 36.0 36.0 36.0 32.0 36.0 45 33.995962505584245 36.0 36.0 36.0 32.0 36.0 46 33.96275058104194 36.0 36.0 36.0 32.0 36.0 47 33.93232211069695 36.0 36.0 36.0 32.0 36.0 48 33.87563473816875 36.0 36.0 36.0 32.0 36.0 49 33.84452839932233 36.0 36.0 36.0 32.0 36.0 50 33.13041985253306 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 1.0 17 0.0 18 1.0 19 13.0 20 20.0 21 111.0 22 272.0 23 958.0 24 2494.0 25 5654.0 26 11940.0 27 22209.0 28 38081.0 29 60711.0 30 89646.0 31 133058.0 32 198866.0 33 327794.0 34 652642.0 35 1484139.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.96306799419887 18.485782478793915 12.556135697812953 24.995013829194264 2 15.708804164034815 20.762094445587252 37.63962304707685 25.889478343301082 3 18.10459680888965 24.9370914161357 29.01220728646659 27.946104488508063 4 12.319607899462822 16.2221229467898 36.156673801950795 35.301595351796585 5 14.598045110448322 36.6860583944257 32.560767956003595 16.15512853912239 6 33.67175107739408 35.99532986154677 16.81837572690256 13.514543334156595 7 30.181799571420555 30.8030746778225 20.527139512845828 18.487986237911123 8 28.213701995304774 32.476020352570984 19.457176724636057 19.85310092748819 9 27.690736504548674 14.170124837547416 18.722924569170463 39.416214088733454 10 16.326689641076843 26.138724098069492 30.586474814822886 26.94811144603077 11 37.152687206342186 21.180343457889922 22.776025965707042 18.890943370060853 12 25.386077088296428 23.466414405312015 28.36814308897991 22.779365417411647 13 29.081107388821643 19.352625402743577 25.86295591167146 25.703311296763324 14 24.050859025287863 19.968553199540253 24.973758562930087 31.006829212241797 15 25.05154400887574 27.315451975908704 22.538303043110737 25.094700972104818 16 25.80694369785524 25.802618249824672 23.942543521931672 24.44789453038842 17 23.74266619252192 25.884737260744284 25.23750986838521 25.13508667834859 18 24.81517031472308 24.664638666261197 26.681875018779312 23.83831600023641 19 25.569675339619387 24.46788313190436 25.747644712378047 24.214796816098204 20 25.96572928938596 23.87594631432692 25.118371837474314 25.039952558812807 21 27.532918555733964 23.742996376886964 24.447741885636685 24.27634318174239 22 26.090492367948453 23.939868104466438 25.190376175993666 24.77926335159144 23 24.308670779036817 23.854036173976898 25.724182836478803 26.11311021050748 24 24.73449778775672 24.897048141055272 25.540513768738034 24.827940302449978 25 25.001089625314176 24.142035631408152 25.653808207454095 25.203066535823577 26 24.37516737104216 25.369305958722794 26.269997434331945 23.98552923590311 27 25.122927421061792 24.579969772947084 25.356581153231083 24.940521652760044 28 24.243472874319334 24.729228585853548 26.152815425046978 24.874483114780137 29 24.21094791911215 24.33744455659973 26.019542756424798 25.432064767863316 30 24.103476797958066 25.033044356869148 26.12698344562746 24.73649539954532 31 25.134445262633033 24.632029771791426 24.846831794001393 25.386693171574148 32 24.713423621897487 24.960409600490273 24.73914582474826 25.58702095286398 33 24.29342582399258 24.48144056138942 25.53216359593539 25.692970018682605 34 25.18393387691867 24.585525538098633 25.756620199740205 24.473920385242497 35 25.836736809815747 24.401118565794988 25.59764320604018 24.164501418349086 36 24.449142244271503 25.322582988593194 25.00835433474399 25.21992043239131 37 25.569769384640477 24.94183600758922 25.04789490263516 24.44049970513514 38 24.599658890717897 24.68082506839522 25.46649913897149 25.253016901915398 39 25.4009921782751 24.407922369182245 24.861283914613498 25.329801537929157 40 25.639566021624955 25.01183739480898 25.217316077922746 24.131280505643318 41 24.257200980944102 25.29959442115284 26.084699708866832 24.35850488903623 42 25.97721552925918 25.571576402467976 25.017780762700614 23.43342730557223 43 24.943694679052243 24.359922168067712 25.49494366496213 25.20143948791792 44 24.429285108153355 25.126247701060233 24.89178060933048 25.552686581455937 45 24.639418711462987 25.412585823992877 24.97502131360485 24.972974150939283 46 24.50262945270997 24.92328905621353 24.938180538252784 25.63590095282372 47 24.817899053669425 24.901503694849662 25.55485481453109 24.72574243694982 48 25.709035677139227 25.382344686401083 24.225388387181983 24.683231249277707 49 24.70801690550089 25.58720200752823 24.632767615399857 25.072013471571026 50 24.831686019059845 25.669871483731903 24.358722907144834 25.139719590063415 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 108.0 1 90.0 2 72.0 3 228.0 4 384.0 5 511.0 6 638.0 7 623.5 8 609.0 9 829.0 10 1049.0 11 1559.0 12 2069.0 13 3724.5 14 5380.0 15 7333.0 16 9286.0 17 9996.5 18 10707.0 19 10839.0 20 10971.0 21 11889.0 22 12807.0 23 14345.5 24 15884.0 25 17291.0 26 18698.0 27 23554.0 28 28410.0 29 33320.0 30 38230.0 31 43258.5 32 48287.0 33 56716.5 34 65146.0 35 75894.0 36 86642.0 37 100733.5 38 114825.0 39 125225.0 40 135625.0 41 145397.0 42 155169.0 43 157113.5 44 159058.0 45 176691.5 46 194325.0 47 208742.5 48 223160.0 49 229831.0 50 236502.0 51 223746.5 52 210991.0 53 208769.5 54 206548.0 55 210716.0 56 214884.0 57 209157.5 58 203431.0 59 186113.5 60 168796.0 61 148900.0 62 129004.0 63 113480.5 64 97957.0 65 83551.5 66 69146.0 67 59301.0 68 49456.0 69 45157.5 70 40859.0 71 31294.0 72 21729.0 73 18557.5 74 15386.0 75 11891.0 76 8396.0 77 7565.5 78 6735.0 79 5567.5 80 4400.0 81 3684.5 82 2969.0 83 2470.5 84 1972.0 85 1418.0 86 864.0 87 618.5 88 373.0 89 301.5 90 230.0 91 194.0 92 158.0 93 126.0 94 94.0 95 97.5 96 101.0 97 66.5 98 32.0 99 45.5 100 59.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007759332578531875 2 3.3018436504390956E-4 3 3.3018436504390956E-4 4 0.0 5 0.0 6 2.311290555307367E-4 7 3.3018436504390956E-5 8 3.3018436504390956E-5 9 0.0011556452776536835 10 7.92442476105383E-4 11 3.3018436504390956E-5 12 1.9811061902634574E-4 13 2.971659285395186E-4 14 1.3207374601756383E-4 15 0.004325415182075215 16 7.59424039600992E-4 17 0.0 18 3.962212380526915E-4 19 0.0 20 6.273502935834282E-4 21 0.0 22 6.603687300878191E-5 23 8.254609126097739E-4 24 3.632028015483005E-4 25 0.001551866515706375 26 0.005282949840702553 27 0.00653765042786941 28 0.004424470491588388 29 0.002377327428316149 30 0.0034999542694654413 31 0.007957443197558221 32 0.003268825213934705 33 0.00412730456304887 34 0.0025424196108381034 35 0.0029716592853951864 36 0.008023480070567003 37 0.003466935832961051 38 0.008452719745124085 39 0.004061267690040087 40 0.0024103458648205398 41 0.0033018436504390954 42 0.0018820508807502847 43 0.0011226268411492926 44 0.0013537558966800294 45 9.575346586273377E-4 46 0.0011226268411492926 47 0.002344308991811758 48 0.0020141246267678485 49 3.632028015483005E-4 50 0.0014858296426975932 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3028611.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.76433667526179 #Duplication Level Percentage of deduplicated Percentage of total 1 70.91990241462395 28.200828765918178 2 14.640098102532335 11.64307579815914 3 5.637566904198593 6.725223252235985 4 2.7260287416155236 4.335948986721596 5 1.5265929330524326 3.035197767798615 6 0.9318407953803605 2.2232418669149023 7 0.6246345001694762 1.7386723594606042 8 0.4272789629991783 1.359237163116484 9 0.3370026098998282 1.206061671644881 >10 1.9487658849392564 14.361713936122097 >50 0.14705247770048438 4.069088900416916 >100 0.10463395631835823 8.478161341958124 >500 0.017344481185402157 4.7107938705677945 >1k 0.011257235384736436 7.91275431896464 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 4161 0.13738971429477076 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 4083 0.13481427624742828 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 4046 0.13359259409676583 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 3757 0.12405026594699683 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 3677 0.12140879102664555 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 3671 0.1212106804076192 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 3626 0.1197248507649216 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 3601 0.11889938985231183 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA 3582 0.1182720395587284 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 3317 0.10952215388506481 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 3226 0.10651747616316522 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 3209 0.10595616274259058 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.603687300878191E-5 2 0.0 0.0 0.0 0.0 6.603687300878191E-5 3 0.0 0.0 0.0 3.3018436504390956E-5 6.603687300878191E-5 4 0.0 0.0 0.0 3.3018436504390956E-5 6.603687300878191E-5 5 0.0 0.0 0.0 6.603687300878191E-5 6.603687300878191E-5 6 0.0 0.0 0.0 6.603687300878191E-5 6.603687300878191E-5 7 0.0 0.0 0.0 6.603687300878191E-5 6.603687300878191E-5 8 0.0 0.0 0.0 6.603687300878191E-5 6.603687300878191E-5 9 0.0 0.0 0.0 6.603687300878191E-5 6.603687300878191E-5 10 0.0 0.0 0.0 6.603687300878191E-5 6.603687300878191E-5 11 0.0 0.0 0.0 6.603687300878191E-5 6.603687300878191E-5 12 0.0 0.0 0.0 6.603687300878191E-5 3.632028015483005E-4 13 0.0 0.0 0.0 6.603687300878191E-5 4.622581110614734E-4 14 0.0 0.0 0.0 6.603687300878191E-5 4.622581110614734E-4 15 0.0 0.0 0.0 1.6509218252195478E-4 5.613134205746463E-4 16 0.0 0.0 0.0 1.6509218252195478E-4 5.613134205746463E-4 17 0.0 0.0 0.0 1.6509218252195478E-4 5.613134205746463E-4 18 0.0 0.0 0.0 1.9811061902634574E-4 5.943318570790372E-4 19 0.0 0.0 0.0 1.9811061902634574E-4 5.943318570790372E-4 20 0.0 0.0 0.0 2.311290555307367E-4 6.273502935834282E-4 21 0.0 0.0 0.0 3.3018436504390956E-4 6.603687300878191E-4 22 0.0 0.0 0.0 4.622581110614734E-4 7.59424039600992E-4 23 0.0 0.0 0.0 9.245162221229468E-4 7.59424039600992E-4 24 0.0 0.0 0.0 0.002113179936281021 8.25460912609774E-4 25 0.0 0.0 0.0 0.002542419610838104 8.25460912609774E-4 26 0.0 0.0 0.0 0.003037696158403968 8.25460912609774E-4 27 0.0 0.0 0.0 0.003830138634509351 9.245162221229468E-4 28 0.0 0.0 0.0 0.006570668864373801 9.245162221229468E-4 29 0.0 0.0 0.0 0.012282858379633436 9.245162221229468E-4 30 0.0 0.0 0.0 0.022155370894446334 9.245162221229468E-4 31 0.0 0.0 0.0 0.046390903288669294 9.575346586273378E-4 32 0.0 0.0 0.0 0.0722773575081118 9.575346586273378E-4 33 0.0 0.0 0.0 0.09964964137025191 9.575346586273378E-4 34 0.0 0.0 0.0 0.12863982862110718 9.905530951317288E-4 35 0.0 0.0 0.0 0.16562047750602504 9.905530951317288E-4 36 0.0 0.0 0.0 0.21838393904004177 9.905530951317288E-4 37 0.0 0.0 0.0 0.2953499145317771 9.905530951317288E-4 38 0.0 0.0 0.0 0.39450427935446314 9.905530951317288E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATATAC 945 0.0 20.25361 1 GTATCAA 8380 0.0 19.846907 1 GTCCTAC 825 0.0 17.066366 1 ATACACT 1125 0.0 17.012472 4 CGTCGTA 1010 0.0 16.771704 10 AACGCAG 9815 0.0 16.765326 6 TCCTACA 905 0.0 16.529549 2 CGGTTAT 80 0.0019881998 16.501343 32 CGAGCCG 1505 0.0 16.371805 15 CGCCCCT 840 0.0 16.237272 5 CCTACAG 1115 0.0 16.178553 3 ATACCGT 1070 0.0 15.625376 6 CGCAATA 1305 0.0 15.510585 36 GTATAAA 440 0.0 15.499726 1 GCTAGGA 1625 0.0 15.434848 35 TGTAGGA 1070 0.0 15.419779 2 TCTAGAT 930 0.0 15.3755665 2 ATACGAA 1310 0.0 15.281416 40 CTAGCGG 1360 0.0 15.20712 29 GTAGGAC 1085 0.0 15.206603 3 >>END_MODULE