SRR4064162_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4064162_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1982859
Sequences flagged as poor quality	0
Sequence length	25
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	7040	0.3550428951327351	No Hit
TATCAACGCAGAGTACTTTTTTTTT	4944	0.24933694226367079	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	4791	0.24162081116206446	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	3012	0.1519018750198577	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	3011	0.15185144279043541	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	2630	0.13263676338055302	No Hit
GTCCTACAGTGGACATTTCTAAATT	2571	0.12966126184463947	No Hit
GTACATGGGGTGGTATCAACGCAAA	2486	0.1253745223437471	No Hit
GGTATCAACGCAGAGTACTTTTTTT	2425	0.12229815634898901	No Hit
CTGTAGGACGTGGAATATGGCAAGA	2384	0.1202304349426762	No Hit
CTTTAGGACGTGAAATATGGCGAGG	2345	0.11826357799520792	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGCATT	40	0.005277268	14.251022	11
GTTCGCC	40	0.005277268	14.251022	11
GAACCGC	105	1.373337E-9	13.570005	6
TACGAGA	65	5.4657998E-5	13.150807	4
AACCGCG	95	7.396011E-8	12.999291	7
CGTAAAC	60	4.104386E-4	12.662463	3
GCGTTAT	110	3.8293365E-8	12.0878105	1
TAGAAAT	555	0.0	11.808081	4
AGAACCG	145	9.822543E-11	11.790379	5
TTTAGAA	635	0.0	11.663651	2
TCGCGTA	115	7.072231E-8	11.565755	9
GCGCCGA	140	6.7848305E-10	11.53829	19
GTCTATA	135	4.7493813E-9	11.256374	1
CGAACGA	110	4.955891E-7	11.229778	16
CGCGTAA	110	4.9672235E-7	11.227796	10
CGAGCCG	255	0.0	11.178965	15
CGCGCTA	60	0.0058668684	11.085808	16
CGAATTT	60	0.0058668684	11.085808	15
ATAGACG	60	0.0058911634	11.079656	3
ATGTCCA	575	0.0	11.070079	9