##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064162_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1982859 Sequences flagged as poor quality 0 Sequence length 25 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.219304045320417 32.0 32.0 32.0 32.0 32.0 2 30.7936313172041 32.0 32.0 32.0 32.0 32.0 3 30.821600022997096 32.0 32.0 32.0 32.0 32.0 4 30.83906520836832 32.0 32.0 32.0 32.0 32.0 5 30.75836305052452 32.0 32.0 32.0 32.0 32.0 6 34.41855321028878 36.0 36.0 36.0 32.0 36.0 7 34.34372338123891 36.0 36.0 36.0 32.0 36.0 8 34.292157939621525 36.0 36.0 36.0 32.0 36.0 9 34.44518243606832 36.0 36.0 36.0 32.0 36.0 10 34.11749952971946 36.0 36.0 36.0 32.0 36.0 11 34.44014324770445 36.0 36.0 36.0 32.0 36.0 12 34.23497586061339 36.0 36.0 36.0 32.0 36.0 13 34.31675878113371 36.0 36.0 36.0 32.0 36.0 14 34.22035101840323 36.0 36.0 36.0 32.0 36.0 15 34.16251937228013 36.0 36.0 36.0 32.0 36.0 16 34.15856195523736 36.0 36.0 36.0 32.0 36.0 17 34.08618767143806 36.0 36.0 36.0 32.0 36.0 18 34.0868478293212 36.0 36.0 36.0 32.0 36.0 19 34.09359364432872 36.0 36.0 36.0 32.0 36.0 20 34.07011996314413 36.0 36.0 36.0 32.0 36.0 21 34.05888971429638 36.0 36.0 36.0 32.0 36.0 22 34.0310854175713 36.0 36.0 36.0 32.0 36.0 23 33.990656925177234 36.0 36.0 36.0 32.0 36.0 24 33.96783331542989 36.0 36.0 36.0 32.0 36.0 25 33.587693325647464 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 5.0 4 15.0 5 28.0 6 80.0 7 35.0 8 117.0 9 139.0 10 189.0 11 65.0 12 119.0 13 91.0 14 212.0 15 351.0 16 613.0 17 790.0 18 1000.0 19 1318.0 20 2058.0 21 3160.0 22 5031.0 23 7462.0 24 11299.0 25 16416.0 26 23193.0 27 30365.0 28 41334.0 29 54843.0 30 72168.0 31 97355.0 32 136957.0 33 193801.0 34 413226.0 35 869023.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.699080263761985 17.884303941798805 11.718539521414264 25.698076273024938 2 15.424299751709864 20.48910584785559 39.657981975639025 24.428612424795524 3 18.44848559428371 25.151702823851235 29.470896055323117 26.928915526541942 4 12.046169333282226 16.291706425497836 37.50859900301999 34.15352523819995 5 13.442361669772756 37.70874050835617 34.59636398483859 14.25253383703248 6 31.912847072305638 37.007511409352645 18.01557966774674 13.064061850594982 7 28.519290875449204 31.54755779393338 21.886482363694697 18.04666896692272 8 26.772310595167824 34.69918723797127 20.231266364971017 18.297235801889887 9 27.471450657775232 14.289707704790317 19.383630903123976 38.855210734310475 10 15.27732151715027 27.50103573265028 33.28473842262837 23.936904327571078 11 35.5340123284851 21.430380794367814 24.509323063632586 18.526283813514507 12 24.551097043581475 24.037156714960435 30.59252010922746 20.81922613223063 13 29.274640292580372 20.81652612789743 25.929163211863898 23.9796703676583 14 22.3986042854533 20.931983644664076 26.808155866230226 29.8612562036524 15 23.679618333245863 29.543344246940894 23.297961671840874 23.47907574797237 16 23.520425697918597 26.571247323364787 26.468547296768758 23.439779681947858 17 22.26137764046747 27.123400630411766 27.015758275542222 23.59946345357854 18 22.660897373130894 26.010980702510583 28.956883733559984 22.37123819079854 19 24.71884196654922 25.411396925039835 26.754616402176485 23.11514470623446 20 24.838485967458958 25.61476278635933 26.666521977012515 22.88022926916919 21 25.157847559886175 24.97978642758292 25.822548555474018 24.039817457056884 22 24.729090642964938 26.163812465615838 26.15462653119937 22.952470360219856 23 23.07681048084659 26.127667177801083 26.944237220209427 23.851285121142894 24 23.940207146090938 25.83920614018928 27.207343435419144 23.01324327830064 25 23.523684640869256 26.03281508355188 27.186259011832732 23.25724126374614 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 709.0 1 709.0 2 1101.5 3 1494.0 4 1494.0 5 1494.0 6 3979.0 7 6464.0 8 6464.0 9 6464.0 10 6412.0 11 6360.0 12 6360.0 13 6360.0 14 6846.5 15 7333.0 16 7333.0 17 7333.0 18 12924.0 19 18515.0 20 18515.0 21 18515.0 22 29701.0 23 40887.0 24 40887.0 25 40887.0 26 60994.5 27 81102.0 28 81102.0 29 81102.0 30 103831.5 31 126561.0 32 126561.0 33 126561.0 34 143125.5 35 159690.0 36 159690.0 37 159690.0 38 173646.5 39 187603.0 40 187603.0 41 187603.0 42 204607.0 43 221611.0 44 221611.0 45 221611.0 46 238837.5 47 256064.0 48 256064.0 49 256064.0 50 254125.0 51 252186.0 52 252186.0 53 252186.0 54 225709.5 55 199233.0 56 199233.0 57 199233.0 58 178532.0 59 157831.0 60 157831.0 61 157831.0 62 136228.5 63 114626.0 64 114626.0 65 114626.0 66 93262.5 67 71899.0 68 71899.0 69 71899.0 70 53954.0 71 36009.0 72 36009.0 73 36009.0 74 27142.5 75 18276.0 76 18276.0 77 18276.0 78 14176.5 79 10077.0 80 10077.0 81 10077.0 82 7025.0 83 3973.0 84 3973.0 85 3973.0 86 3028.0 87 2083.0 88 2083.0 89 2083.0 90 1507.0 91 931.0 92 931.0 93 931.0 94 651.0 95 371.0 96 371.0 97 371.0 98 671.0 99 971.0 100 971.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.038782384425720635 2 0.004942358483381824 3 0.0017651280297792226 4 0.003580688288980709 5 0.00978385250791912 6 0.013868863091122464 7 0.023753580057886112 8 0.0367650952488301 9 0.051793899616664626 10 0.0590057084240483 11 0.055828477970445704 12 0.06586449162547614 13 0.0664696783785433 14 0.0688399931613897 15 0.062283803336495434 16 0.06858783201427837 17 0.06541060156067577 18 0.0789264390458424 19 0.07564834413339526 20 0.08104459268157746 21 0.07650569203357376 22 0.07912816796353145 23 0.08296101739962347 24 0.07827082006335297 25 0.07943076134006503 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1982859.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.01381767579593 #Duplication Level Percentage of deduplicated Percentage of total 1 73.93878694641418 37.71899796453892 2 14.987243478195907 15.291130125188952 3 4.94637978870467 7.570011500886658 4 2.153628381133116 4.394592223061773 5 1.1163340168947034 2.8474230001577636 6 0.6568511579311733 2.0105091126501784 7 0.40584048829435143 1.4492430872712823 8 0.3035848247039232 1.238961671726752 9 0.21860036277008826 1.0036475145194517 >10 1.1014765518586815 9.980069626866449 >50 0.08379115321756458 2.9798035186897014 >100 0.07704602316080163 7.937649607887123 >500 0.007653672928581643 2.642741844154341 >1k 0.0026837554424896668 2.5782426763857327 >5k 9.93983497218395E-5 0.3569765260149384 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 7040 0.3550428951327351 No Hit TATCAACGCAGAGTACTTTTTTTTT 4944 0.24933694226367079 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 4791 0.24162081116206446 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 3012 0.1519018750198577 No Hit GTCCTAAAGTGTGTATTTCTCATTT 3011 0.15185144279043541 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 2630 0.13263676338055302 No Hit GTCCTACAGTGGACATTTCTAAATT 2571 0.12966126184463947 No Hit GTACATGGGGTGGTATCAACGCAAA 2486 0.1253745223437471 No Hit GGTATCAACGCAGAGTACTTTTTTT 2425 0.12229815634898901 No Hit CTGTAGGACGTGGAATATGGCAAGA 2384 0.1202304349426762 No Hit CTTTAGGACGTGAAATATGGCGAGG 2345 0.11826357799520792 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.521611471113175E-4 2 0.0 0.0 0.0 0.0 2.521611471113175E-4 3 0.0 0.0 0.0 0.0 2.521611471113175E-4 4 0.0 0.0 0.0 0.0 2.521611471113175E-4 5 0.0 0.0 0.0 0.0 2.521611471113175E-4 6 0.0 0.0 0.0 0.0 3.0259337653358104E-4 7 0.0 0.0 0.0 0.0 3.0259337653358104E-4 8 0.0 0.0 0.0 0.0 3.0259337653358104E-4 9 0.0 0.0 0.0 0.0 3.0259337653358104E-4 10 0.0 0.0 0.0 5.043222942226351E-5 3.5302560595584456E-4 11 0.0 0.0 0.0 5.043222942226351E-5 3.5302560595584456E-4 12 0.0 0.0 0.0 5.043222942226351E-5 5.04322294222635E-4 13 0.0 0.0 0.0 1.0086445884452702E-4 5.547545236448986E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGCATT 40 0.005277268 14.251022 11 GTTCGCC 40 0.005277268 14.251022 11 GAACCGC 105 1.373337E-9 13.570005 6 TACGAGA 65 5.4657998E-5 13.150807 4 AACCGCG 95 7.396011E-8 12.999291 7 CGTAAAC 60 4.104386E-4 12.662463 3 GCGTTAT 110 3.8293365E-8 12.0878105 1 TAGAAAT 555 0.0 11.808081 4 AGAACCG 145 9.822543E-11 11.790379 5 TTTAGAA 635 0.0 11.663651 2 TCGCGTA 115 7.072231E-8 11.565755 9 GCGCCGA 140 6.7848305E-10 11.53829 19 GTCTATA 135 4.7493813E-9 11.256374 1 CGAACGA 110 4.955891E-7 11.229778 16 CGCGTAA 110 4.9672235E-7 11.227796 10 CGAGCCG 255 0.0 11.178965 15 CGCGCTA 60 0.0058668684 11.085808 16 CGAATTT 60 0.0058668684 11.085808 15 ATAGACG 60 0.0058911634 11.079656 3 ATGTCCA 575 0.0 11.070079 9 >>END_MODULE