##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064160_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3397025 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.351228207034097 32.0 32.0 32.0 32.0 32.0 2 31.42452204502469 32.0 32.0 32.0 32.0 32.0 3 31.4956819570065 32.0 32.0 32.0 32.0 32.0 4 31.575821196488103 32.0 32.0 32.0 32.0 32.0 5 31.52923484519543 32.0 32.0 32.0 32.0 32.0 6 35.12607148902348 36.0 36.0 36.0 36.0 36.0 7 35.14520705617415 36.0 36.0 36.0 36.0 36.0 8 35.08825781382239 36.0 36.0 36.0 36.0 36.0 9 35.202108609739405 36.0 36.0 36.0 36.0 36.0 10 35.05797896689015 36.0 36.0 36.0 36.0 36.0 11 35.1942043405627 36.0 36.0 36.0 36.0 36.0 12 35.10689088246333 36.0 36.0 36.0 36.0 36.0 13 35.14297510321531 36.0 36.0 36.0 36.0 36.0 14 35.08570705249446 36.0 36.0 36.0 36.0 36.0 15 35.06414671661233 36.0 36.0 36.0 36.0 36.0 16 35.07675686814198 36.0 36.0 36.0 36.0 36.0 17 35.03962997034169 36.0 36.0 36.0 36.0 36.0 18 35.03922432128112 36.0 36.0 36.0 36.0 36.0 19 35.035529617827365 36.0 36.0 36.0 36.0 36.0 20 35.032636792487544 36.0 36.0 36.0 36.0 36.0 21 35.02820938909781 36.0 36.0 36.0 36.0 36.0 22 35.0158002958471 36.0 36.0 36.0 36.0 36.0 23 34.96285308468439 36.0 36.0 36.0 36.0 36.0 24 34.93576585394573 36.0 36.0 36.0 36.0 36.0 25 34.904447273717444 36.0 36.0 36.0 32.0 36.0 26 34.85322745637727 36.0 36.0 36.0 32.0 36.0 27 34.85086597831926 36.0 36.0 36.0 32.0 36.0 28 34.82889911025088 36.0 36.0 36.0 32.0 36.0 29 34.8058872101324 36.0 36.0 36.0 32.0 36.0 30 34.79115078634982 36.0 36.0 36.0 32.0 36.0 31 34.78462507635357 36.0 36.0 36.0 32.0 36.0 32 34.751229090159775 36.0 36.0 36.0 32.0 36.0 33 34.72908677445706 36.0 36.0 36.0 32.0 36.0 34 34.72329641377382 36.0 36.0 36.0 32.0 36.0 35 34.685793598810726 36.0 36.0 36.0 32.0 36.0 36 34.667237362103606 36.0 36.0 36.0 32.0 36.0 37 34.66626710136075 36.0 36.0 36.0 32.0 36.0 38 34.62518733303405 36.0 36.0 36.0 32.0 36.0 39 34.63219846777695 36.0 36.0 36.0 32.0 36.0 40 34.61153862570926 36.0 36.0 36.0 32.0 36.0 41 34.59726849228369 36.0 36.0 36.0 32.0 36.0 42 34.53756478094804 36.0 36.0 36.0 32.0 36.0 43 34.52413773816796 36.0 36.0 36.0 32.0 36.0 44 34.47302271840802 36.0 36.0 36.0 32.0 36.0 45 34.45778673986797 36.0 36.0 36.0 32.0 36.0 46 34.43907772241888 36.0 36.0 36.0 32.0 36.0 47 34.407775627203215 36.0 36.0 36.0 32.0 36.0 48 34.3709510527594 36.0 36.0 36.0 32.0 36.0 49 34.358566098277166 36.0 36.0 36.0 32.0 36.0 50 33.76884038239342 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 4.0 18 3.0 19 14.0 20 32.0 21 113.0 22 324.0 23 1032.0 24 2561.0 25 5650.0 26 11461.0 27 21586.0 28 35744.0 29 54768.0 30 80351.0 31 114836.0 32 166360.0 33 271199.0 34 575269.0 35 2055718.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.977675894187485 17.698775306644386 11.71308984313244 26.610458956035686 2 16.345982881426384 19.915649400119868 36.4389645959449 27.299403122508842 3 18.14873297548965 23.567374170374332 28.893757870883075 29.390134983252942 4 12.46932242182498 15.69970783258881 35.48637410675518 36.34459563883104 5 14.397892273386272 36.633848735290435 33.484858074344466 15.483400916978827 6 35.118948442428035 35.36625357887418 16.206861429642117 13.307936549055672 7 30.75307408869472 30.3987638588258 20.386291173183107 18.46187087929637 8 28.624811415871243 32.8644328493314 18.768598994708604 19.742156740088753 9 27.410852512361707 13.824767448056113 18.039684037276608 40.72469600230558 10 15.593313841556109 26.823527195268277 31.622337199895906 25.960821763279707 11 37.72166460996449 20.830850768201813 22.106084619949698 19.341400001884 12 24.617318890474266 23.397219738835727 28.634017060251942 23.351444310438062 13 29.60497614078263 19.161674531426165 25.165336575400133 26.068012752391073 14 23.70868323590962 19.05957491528597 24.983537026750234 32.24820482205417 15 25.36939954028186 26.92686548534177 21.88303682455347 25.820698149822896 16 26.07736878654508 25.81030985253766 23.14572580595307 24.966595554964186 17 24.446891029650946 25.90605014681964 24.769408526578403 24.87765029695101 18 25.182667724458092 24.906307449334193 25.511750757650464 24.399274068557247 19 25.809657455954817 24.806602722442562 25.132917851895613 24.250821969707008 20 26.10712770726972 24.1056328637146 24.59853677247439 25.188702656541295 21 26.889822712520516 24.074123681750944 24.34465451387611 24.69139909185243 22 26.164108542192864 23.888349200181334 24.763439720696375 25.184102536929426 23 24.83171155683185 23.873835551715562 25.23550961953138 26.058943271921216 24 25.101221368203213 24.66336572456366 24.919561614478617 25.31585129275451 25 25.291076690108234 24.15214558206065 25.07447106336642 25.482306664464694 26 25.15843434163528 24.861893416603053 25.14983809919416 24.829834142567503 27 25.513842853008722 24.576609739676115 24.6014566032159 25.30809080409926 28 25.043142403786995 24.291072127740374 25.3700296447633 25.29575582370933 29 25.00185460595805 24.619570273080424 25.14621948878817 25.232355632173352 30 24.946178758059204 24.73351383161024 25.29128824487554 25.02901916545502 31 25.476694806102845 24.442066371779113 24.530650396331815 25.550588425786223 32 25.3083090662236 24.55721601593916 24.42259390576629 25.711881012070947 33 24.99571663998521 24.301812317589214 24.824912139601622 25.877558902823957 34 25.561182855588516 24.310289402319505 25.017515805438556 25.111011936653426 35 25.91977984808034 24.237465214883926 25.075281276282947 24.767473660752792 36 25.034864157114654 24.71276262197303 24.6986903677186 25.55368285319371 37 25.834448561252948 24.435737849118347 24.744370920194033 24.98544266943467 38 25.141878057145718 24.378620183086504 25.036130071200308 25.443371688567474 39 25.59406842705041 24.380098991042644 24.592853486132686 25.43297909577426 40 25.802929463492987 24.453772458474344 24.92634538890341 24.816952689129263 41 24.889590834022684 24.80598543970844 25.18294567710066 25.121478049168218 42 25.891703535491956 24.726894955567534 24.757333999027953 24.62406750991256 43 25.378807950139127 24.02916479735482 24.99717395374469 25.594853298761365 44 25.02958510206124 24.544654369469352 24.756842842760335 25.66891768570907 45 25.100663119588194 24.689738573212512 24.781673336328154 25.427924970871135 46 25.074014118982497 24.45143299047067 24.889792042183263 25.584760848363565 47 25.149766526128996 24.513637806105116 25.15409393238766 25.182501735378228 48 25.75604408414823 24.941786151021 24.39620978534324 24.90595997948753 49 25.06031040836218 24.987481634579126 24.565257260136786 25.38695069692191 50 25.088983528590276 25.048771304604063 24.6195955992637 25.242649567541964 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 42.0 1 62.0 2 82.0 3 252.5 4 423.0 5 484.5 6 546.0 7 491.0 8 436.0 9 582.5 10 729.0 11 1154.0 12 1579.0 13 2944.5 14 4310.0 15 5550.5 16 6791.0 17 6851.0 18 6911.0 19 6818.5 20 6726.0 21 7774.5 22 8823.0 23 10595.5 24 12368.0 25 15423.5 26 18479.0 27 22732.0 28 26985.0 29 31263.5 30 35542.0 31 40473.0 32 45404.0 33 52852.5 34 60301.0 35 70354.5 36 80408.0 37 95806.0 38 111204.0 39 124423.0 40 137642.0 41 152797.5 42 167953.0 43 176413.5 44 184874.0 45 203605.5 46 222337.0 47 238469.5 48 254602.0 49 263412.5 50 272223.0 51 268820.5 52 265418.0 53 263214.5 54 261011.0 55 260001.5 56 258992.0 57 250805.5 58 242619.0 59 221287.5 60 199956.0 61 175919.5 62 151883.0 63 131778.5 64 111674.0 65 95002.0 66 78330.0 67 66401.5 68 54473.0 69 48249.0 70 42025.0 71 32456.5 72 22888.0 73 19392.5 74 15897.0 75 12433.0 76 8969.0 77 7655.5 78 6342.0 79 5117.5 80 3893.0 81 3086.5 82 2280.0 83 1844.5 84 1409.0 85 1007.0 86 605.0 87 432.0 88 259.0 89 190.0 90 121.0 91 104.0 92 87.0 93 73.5 94 60.0 95 60.5 96 61.0 97 43.0 98 25.0 99 26.5 100 28.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00994988261787888 2 3.826877929953415E-4 3 3.2381274791913514E-4 4 0.0 5 0.0 6 2.0606265776672235E-4 7 5.887504507620639E-5 8 0.0 9 0.0012363759466003342 10 0.0010891883339098182 11 2.9437522538103197E-5 12 1.7662513522861915E-4 13 4.415628380715479E-4 14 2.3550018030482557E-4 15 0.004739441128634614 16 6.476254958382703E-4 17 0.0 18 2.943752253810319E-4 19 5.887504507620639E-5 20 4.121253155334447E-4 21 0.0 22 1.4718761269051596E-4 23 8.831256761430958E-4 24 4.415628380715479E-4 25 0.0020017515325910173 26 0.005652004327315813 27 0.006417379913306496 28 0.003974065542643931 29 0.002266689235433946 30 0.0038857529750296214 31 0.007359380634525798 32 0.003208689956653248 33 0.004680566083558408 34 0.002737689596043597 35 0.002884877208734113 36 0.007948131085287862 37 0.0032675650017294543 38 0.007948131085287862 39 0.004474503425791685 40 0.002619939505891184 41 0.003385315091881867 42 0.00211950162274343 43 0.0015601886945194694 44 0.0013246885142146438 45 0.0015013136494432628 46 0.0011186258564479213 47 0.0020900641002053267 48 0.001972314010052914 49 4.7100036060965115E-4 50 0.0014130010818289532 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3397025.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.58276511643831 #Duplication Level Percentage of deduplicated Percentage of total 1 75.37394683109288 37.372487016249885 2 13.549806750437563 13.436737709601518 3 4.470174261118558 6.6493080125576896 4 1.9819188443952789 3.930760661659759 5 1.1224494961814717 2.782707486211521 6 0.6892959280086534 2.050631885650226 7 0.4859318753810078 1.6865692227724816 8 0.36041930463211674 1.4296468580003416 9 0.27062461033783025 1.2076484840197454 >10 1.5219010245278684 13.700685985506844 >50 0.09885097624713576 3.380601850747242 >100 0.06237305800033557 6.202890773104555 >500 0.00800555005885402 2.760462000460745 >1k 0.004301489580447967 3.4088620534575864 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.831256761430958E-5 2 0.0 0.0 0.0 0.0 8.831256761430958E-5 3 0.0 0.0 0.0 0.0 8.831256761430958E-5 4 0.0 0.0 0.0 0.0 8.831256761430958E-5 5 0.0 2.9437522538103193E-5 0.0 0.0 8.831256761430958E-5 6 0.0 2.9437522538103193E-5 0.0 0.0 8.831256761430958E-5 7 0.0 2.9437522538103193E-5 0.0 0.0 8.831256761430958E-5 8 0.0 2.9437522538103193E-5 0.0 0.0 8.831256761430958E-5 9 0.0 2.9437522538103193E-5 0.0 2.9437522538103193E-5 1.1775009015241277E-4 10 0.0 2.9437522538103193E-5 0.0 2.9437522538103193E-5 1.4718761269051596E-4 11 0.0 2.9437522538103193E-5 0.0 2.9437522538103193E-5 1.4718761269051596E-4 12 0.0 2.9437522538103193E-5 0.0 2.9437522538103193E-5 4.415628380715479E-4 13 0.0 2.9437522538103193E-5 0.0 2.9437522538103193E-5 4.710003606096511E-4 14 0.0 2.9437522538103193E-5 0.0 2.9437522538103193E-5 5.004378831477543E-4 15 0.0 2.9437522538103193E-5 0.0 5.8875045076206386E-5 6.476254958382703E-4 16 0.0 2.9437522538103193E-5 0.0 8.831256761430958E-5 7.065005409144766E-4 17 0.0 2.9437522538103193E-5 0.0 1.1775009015241277E-4 7.065005409144766E-4 18 0.0 2.9437522538103193E-5 0.0 1.1775009015241277E-4 7.653755859906831E-4 19 0.0 2.9437522538103193E-5 0.0 1.1775009015241277E-4 7.653755859906831E-4 20 0.0 2.9437522538103193E-5 0.0 1.7662513522861915E-4 8.536881536049926E-4 21 0.0 2.9437522538103193E-5 0.0 1.7662513522861915E-4 8.536881536049926E-4 22 0.0 2.9437522538103193E-5 0.0 3.8268779299534153E-4 8.536881536049926E-4 23 0.0 2.9437522538103193E-5 0.0 5.887504507620638E-4 8.831256761430958E-4 24 0.0 2.9437522538103193E-5 0.0 9.12563198681199E-4 8.831256761430958E-4 25 0.0 2.9437522538103193E-5 0.0 0.0010008757662955086 8.831256761430958E-4 26 0.0 2.9437522538103193E-5 0.0 0.0011480633789860246 9.12563198681199E-4 27 0.0 2.9437522538103193E-5 0.0 0.0017956888748242947 9.12563198681199E-4 28 0.0 2.9437522538103193E-5 0.0 0.00350306518203428 9.12563198681199E-4 29 0.0 2.9437522538103193E-5 0.0 0.007359380634525799 9.12563198681199E-4 30 0.0 2.9437522538103193E-5 0.0 0.015307511719813661 9.12563198681199E-4 31 0.0 2.9437522538103193E-5 0.0 0.03244014983698972 9.420007212193022E-4 32 0.0 2.9437522538103193E-5 0.0 0.0525754152530523 9.714382437574054E-4 33 0.0 2.9437522538103193E-5 0.0 0.07318168102972454 9.714382437574054E-4 34 0.0 2.9437522538103193E-5 0.0 0.09720269942081675 0.0010891883339098182 35 0.0 2.9437522538103193E-5 0.0 0.12678740957161044 0.0010891883339098182 36 0.0 2.9437522538103193E-5 0.0 0.16805881617003113 0.0010891883339098182 37 0.0 2.9437522538103193E-5 0.0 0.22911223791405716 0.0010891883339098182 38 0.0 2.9437522538103193E-5 0.0 0.31189055129120336 0.0010891883339098182 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4415 0.0 26.559776 1 GGTATCA 1865 0.0 22.17721 1 GTATCGC 115 2.0260268E-7 19.128695 6 AACGCAG 6240 0.0 18.648943 6 TCAACGC 6420 0.0 18.126076 4 CAACGCA 6525 0.0 17.868107 5 ATCAACG 6570 0.0 17.745981 3 TATCAAC 6665 0.0 17.658327 2 CGACGGT 850 0.0 17.3396 7 ACGACGG 945 0.0 16.062033 6 GACGGTA 960 0.0 16.040443 8 CTAGATA 755 0.0 16.025269 3 TAGGCCG 110 5.6304307E-5 15.998545 5 TACGACG 950 0.0 15.977493 5 ACGGTAT 955 0.0 15.894776 9 TATATCG 85 0.0029832353 15.527998 5 ACGCAGA 7515 0.0 15.484951 7 TCTAGAT 915 0.0 15.387031 2 GTATTAG 870 0.0 15.172597 1 AGAGTAC 7730 0.0 15.112286 11 >>END_MODULE