##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064159_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 20214 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.83936875432868 32.0 32.0 32.0 21.0 32.0 2 29.808103294746214 32.0 32.0 32.0 21.0 32.0 3 30.712822796081923 32.0 32.0 32.0 32.0 32.0 4 31.045562481448503 32.0 32.0 32.0 32.0 32.0 5 30.814979717027803 32.0 32.0 32.0 32.0 32.0 6 34.40744038785 36.0 36.0 36.0 32.0 36.0 7 34.48575244879786 36.0 36.0 36.0 32.0 36.0 8 34.330661917482935 36.0 36.0 36.0 32.0 36.0 9 34.6072523993272 36.0 36.0 36.0 32.0 36.0 10 34.166765607994456 36.0 36.0 36.0 32.0 36.0 11 34.75680221628574 36.0 36.0 36.0 32.0 36.0 12 34.44009102602157 36.0 36.0 36.0 32.0 36.0 13 34.62758484218858 36.0 36.0 36.0 32.0 36.0 14 34.499950529336104 36.0 36.0 36.0 32.0 36.0 15 34.388789947561094 36.0 36.0 36.0 32.0 36.0 16 34.45092510141486 36.0 36.0 36.0 32.0 36.0 17 34.31329771445533 36.0 36.0 36.0 32.0 36.0 18 34.38552488374394 36.0 36.0 36.0 32.0 36.0 19 34.45349757593747 36.0 36.0 36.0 32.0 36.0 20 34.39591372316217 36.0 36.0 36.0 32.0 36.0 21 34.44004155535767 36.0 36.0 36.0 32.0 36.0 22 34.34629464727416 36.0 36.0 36.0 32.0 36.0 23 34.25754427624419 36.0 36.0 36.0 32.0 36.0 24 34.29311368358563 36.0 36.0 36.0 32.0 36.0 25 34.21480162263778 36.0 36.0 36.0 32.0 36.0 26 34.11996635994855 36.0 36.0 36.0 32.0 36.0 27 34.11200158306124 36.0 36.0 36.0 32.0 36.0 28 34.088700900366085 36.0 36.0 36.0 32.0 36.0 29 34.05372514099139 36.0 36.0 36.0 32.0 36.0 30 33.96744830315623 36.0 36.0 36.0 32.0 36.0 31 33.97368160680716 36.0 36.0 36.0 32.0 36.0 32 33.860641139804095 36.0 36.0 36.0 32.0 36.0 33 33.8284357376076 36.0 36.0 36.0 32.0 36.0 34 33.794993568813695 36.0 36.0 36.0 32.0 36.0 35 33.81552389433066 36.0 36.0 36.0 32.0 36.0 36 33.78663302661522 36.0 36.0 36.0 32.0 36.0 37 33.77134659147126 36.0 36.0 36.0 32.0 36.0 38 33.71361432670427 36.0 36.0 36.0 32.0 36.0 39 33.68348669239141 36.0 36.0 36.0 32.0 36.0 40 33.691253586623134 36.0 36.0 36.0 27.0 36.0 41 33.66236271890769 36.0 36.0 36.0 27.0 36.0 42 33.547096072029284 36.0 36.0 36.0 21.0 36.0 43 33.49643811219946 36.0 36.0 36.0 21.0 36.0 44 33.50885524883744 36.0 36.0 36.0 21.0 36.0 45 33.357722370634214 36.0 36.0 36.0 21.0 36.0 46 33.339566636984266 36.0 36.0 36.0 21.0 36.0 47 33.38542594241615 36.0 36.0 36.0 21.0 36.0 48 33.21945186504403 36.0 36.0 36.0 21.0 36.0 49 33.22222222222222 36.0 36.0 36.0 21.0 36.0 50 32.33471851192243 36.0 32.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 21 1.0 22 3.0 23 9.0 24 32.0 25 60.0 26 143.0 27 242.0 28 373.0 29 614.0 30 933.0 31 1341.0 32 1959.0 33 2982.0 34 4715.0 35 6807.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.331288343558285 18.607757767662775 13.081337819117355 25.97961606966159 2 17.94300979519145 22.04907489858514 35.46057188087464 24.54734342534877 3 20.268130998318 24.052636786385673 29.479568615810827 26.199663599485508 4 14.113980409617097 17.25042050064312 36.51924408825566 32.11635500148412 5 18.165627782724844 34.89660631245671 31.34461264470169 15.593153260116752 6 33.239339071930345 37.16730978529732 16.157118828534678 13.436232314237657 7 29.355891956070053 30.211734441476207 20.634213911150688 19.79815969130306 8 27.78272484416741 32.79410309686356 19.29850598595033 20.124666073018698 9 26.981300089047195 13.955674285148906 18.066686454932228 40.99633917087167 10 14.915405164737312 26.110616404472147 32.90293855743544 26.0710398733551 11 37.77579895122192 20.475907786682498 22.632828732561592 19.115464529533988 12 24.18620757890571 23.46393588601959 28.88592064905511 23.46393588601959 13 28.82655585237954 19.560700504600774 25.49718017215791 26.11556347086178 14 23.57277134659147 19.179776392599187 25.81873948748392 31.42871277332542 15 24.91837340457109 26.85267636291679 22.32116355001484 25.90778668249728 16 25.12120312654596 25.764321757197983 24.072425051944197 25.04205006431186 17 23.57277134659147 26.33818145839517 25.096467794597803 24.992579400415554 18 24.220837043633125 25.754427624418717 25.80389828831503 24.220837043633125 19 24.45334916394578 25.620856831898685 25.695062827743147 24.230731176412387 20 25.170673790442265 25.348768180468984 24.888691006233305 24.591867022855446 21 26.2145047986544 24.76501434649253 24.75512021371327 24.265360641139804 22 24.67596715147917 24.878796873454043 25.541703769664586 24.903532205402197 23 23.854754130800433 24.428613831997627 25.78905708914614 25.927574948055803 24 23.61729494409815 25.50707430493717 25.774215889977242 25.101414860987436 25 24.923320470960718 24.60176115563471 25.615909765509056 24.859008607895518 26 23.70374035226598 25.47991292301603 26.13299030279042 24.68335642192757 27 24.950524440926184 24.84167821096378 25.420542252127447 24.787255095982587 28 24.016624610360697 25.421800009895602 25.505912621839595 25.055662757904113 29 24.558452481076536 25.918963043585812 24.969079305397514 24.553505169940138 30 24.774863928748143 25.22018802572984 25.754576942107864 24.25037110341415 31 25.16451437336104 25.69392904853792 25.00123695017565 24.14031962792539 32 24.884975016078762 25.201602928808192 24.97897392767031 24.934448127442735 33 23.4947805867511 25.656755553356753 25.879384554494635 24.969079305397514 34 24.252919057985356 25.940035622402537 25.41559469622007 24.391450623392043 35 25.566439101612744 25.18056792322153 25.037102997922233 24.215889977243492 36 23.8533471871753 25.763198258374153 25.7038246499431 24.679629904507447 37 24.86518577153317 25.701281353584328 25.458863107900854 23.974669766981645 38 24.713041757371858 25.578864041163662 24.9455768850188 24.762517316445674 39 24.296244990847473 25.354969574036513 24.934448127442735 25.41433730767328 40 24.724160110830738 26.2678739300381 25.263470387412795 23.74449557171837 41 24.776134171078017 25.488546974719238 25.043288972443477 24.692029881759264 42 24.711819126304853 26.18611784495127 25.310443773808935 23.791619254934943 43 24.35440783615316 25.81873948748392 25.309191649351938 24.51766102701098 44 24.695755417037695 25.66538042940536 25.126150192935587 24.51271396062135 45 24.65861864239066 25.65307737977439 25.247377795369086 24.440926182465862 46 24.523821303121753 26.294958689952015 24.83055459357839 24.350665413347848 47 24.646284753141387 25.418027109923813 25.096467794597803 24.839220342336993 48 24.5522904917384 26.921935292371625 24.448402097556148 24.077372118333827 49 24.726661059714043 25.41928461880968 25.374758818582098 24.47929550289418 50 25.140991392104482 25.84347481943208 24.81448501038884 24.2010487780746 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.0 2 0.0 3 1.5 4 3.0 5 4.0 6 5.0 7 5.5 8 6.0 9 8.0 10 10.0 11 12.0 12 14.0 13 21.0 14 28.0 15 44.0 16 60.0 17 58.0 18 56.0 19 65.0 20 74.0 21 82.0 22 90.0 23 122.0 24 154.0 25 171.0 26 188.0 27 237.0 28 286.0 29 299.0 30 312.0 31 361.0 32 410.0 33 453.0 34 496.0 35 578.0 36 660.0 37 696.0 38 732.0 39 825.0 40 918.0 41 966.5 42 1015.0 43 1057.5 44 1100.0 45 1161.0 46 1222.0 47 1329.0 48 1436.0 49 1450.0 50 1464.0 51 1424.5 52 1385.0 53 1394.5 54 1404.0 55 1416.5 56 1429.0 57 1372.5 58 1316.0 59 1140.0 60 964.0 61 869.0 62 774.0 63 687.5 64 601.0 65 534.0 66 467.0 67 405.5 68 344.0 69 304.0 70 264.0 71 212.0 72 160.0 73 138.0 74 116.0 75 100.5 76 85.0 77 74.5 78 64.0 79 52.0 80 40.0 81 30.0 82 20.0 83 16.0 84 12.0 85 11.5 86 11.0 87 7.5 88 4.0 89 3.0 90 2.0 91 3.0 92 4.0 93 3.0 94 2.0 95 2.5 96 3.0 97 1.5 98 0.0 99 2.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009894132779261898 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.009894132779261898 27 0.009894132779261898 28 0.014841199168892847 29 0.004947066389630949 30 0.019788265558523796 31 0.014841199168892847 32 0.004947066389630949 33 0.004947066389630949 34 0.009894132779261898 35 0.0 36 0.014841199168892847 37 0.004947066389630949 38 0.009894132779261898 39 0.004947066389630949 40 0.014841199168892847 41 0.004947066389630949 42 0.004947066389630949 43 0.0 44 0.0 45 0.009894132779261898 46 0.004947066389630949 47 0.0 48 0.0 49 0.004947066389630949 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 20214.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 91.15464529533986 #Duplication Level Percentage of deduplicated Percentage of total 1 95.25670248561815 86.83090927080241 2 3.1911429501790947 5.817750074205995 3 0.6729621187452512 1.8403086969427132 4 0.2605014653207424 0.9498367468091422 5 0.13567784652122003 0.6183832987038687 6 0.1573863019646152 0.8607895517957851 7 0.0705524801910344 0.45018304145641636 8 0.05969825246933681 0.43534184228752354 9 0.0379897970259416 0.3116651825467498 >10 0.1573863019646152 1.8848322944493914 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 0.0 0.0 23 0.0 0.0 0.0 0.0 0.0 24 0.0 0.0 0.0 0.0 0.0 25 0.0 0.0 0.0 0.0 0.0 26 0.0 0.0 0.0 0.0 0.0 27 0.0 0.0 0.0 0.0 0.0 28 0.0 0.0 0.0 0.0 0.0 29 0.0 0.0 0.0 0.0 0.0 30 0.0 0.0 0.0 0.004947066389630949 0.0 31 0.0 0.0 0.0 0.014841199168892847 0.0 32 0.0 0.0 0.0 0.019788265558523796 0.0 33 0.0 0.0 0.0 0.019788265558523796 0.0 34 0.0 0.0 0.0 0.024735331948154745 0.0 35 0.0 0.0 0.0 0.04452359750667854 0.0 36 0.0 0.0 0.0 0.04452359750667854 0.0 37 0.0 0.0 0.0 0.054417730285940435 0.0 38 0.0 0.0 0.0 0.07420599584446423 0.0 >>END_MODULE >>Kmer Content pass >>END_MODULE