##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064158_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1934941 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.28482573887266 32.0 32.0 32.0 32.0 32.0 2 31.419590571495462 32.0 32.0 32.0 32.0 32.0 3 31.485207042488636 32.0 32.0 32.0 32.0 32.0 4 31.56602656101659 32.0 32.0 32.0 32.0 32.0 5 31.51632995528029 32.0 32.0 32.0 32.0 32.0 6 35.099657302212314 36.0 36.0 36.0 36.0 36.0 7 35.113628270836166 36.0 36.0 36.0 36.0 36.0 8 35.067667179516064 36.0 36.0 36.0 36.0 36.0 9 35.16785162958457 36.0 36.0 36.0 36.0 36.0 10 35.02736362504076 36.0 36.0 36.0 36.0 36.0 11 35.17074008974951 36.0 36.0 36.0 36.0 36.0 12 35.0771439542601 36.0 36.0 36.0 36.0 36.0 13 35.11614876112502 36.0 36.0 36.0 36.0 36.0 14 35.058634345956804 36.0 36.0 36.0 36.0 36.0 15 35.036336508451676 36.0 36.0 36.0 36.0 36.0 16 35.044608595300836 36.0 36.0 36.0 36.0 36.0 17 35.009878854187285 36.0 36.0 36.0 36.0 36.0 18 35.00675007661732 36.0 36.0 36.0 36.0 36.0 19 35.003652824556404 36.0 36.0 36.0 36.0 36.0 20 34.99464841563645 36.0 36.0 36.0 36.0 36.0 21 34.99641797863604 36.0 36.0 36.0 36.0 36.0 22 34.97834197528503 36.0 36.0 36.0 36.0 36.0 23 34.92815904981082 36.0 36.0 36.0 32.0 36.0 24 34.90175721120179 36.0 36.0 36.0 32.0 36.0 25 34.87376566003821 36.0 36.0 36.0 32.0 36.0 26 34.819044094884546 36.0 36.0 36.0 32.0 36.0 27 34.819336093451945 36.0 36.0 36.0 32.0 36.0 28 34.79256835221332 36.0 36.0 36.0 32.0 36.0 29 34.764323563354125 36.0 36.0 36.0 32.0 36.0 30 34.739154320467655 36.0 36.0 36.0 32.0 36.0 31 34.73121454349254 36.0 36.0 36.0 32.0 36.0 32 34.68744421664537 36.0 36.0 36.0 32.0 36.0 33 34.65299355380862 36.0 36.0 36.0 32.0 36.0 34 34.63288699758804 36.0 36.0 36.0 32.0 36.0 35 34.598146920242016 36.0 36.0 36.0 32.0 36.0 36 34.572146644264606 36.0 36.0 36.0 32.0 36.0 37 34.54972838965116 36.0 36.0 36.0 32.0 36.0 38 34.51146107297328 36.0 36.0 36.0 32.0 36.0 39 34.50734053389741 36.0 36.0 36.0 32.0 36.0 40 34.481174361388796 36.0 36.0 36.0 32.0 36.0 41 34.459110639549216 36.0 36.0 36.0 32.0 36.0 42 34.39014626285763 36.0 36.0 36.0 32.0 36.0 43 34.371917283266 36.0 36.0 36.0 32.0 36.0 44 34.30277564018748 36.0 36.0 36.0 32.0 36.0 45 34.26334808141437 36.0 36.0 36.0 32.0 36.0 46 34.2338768985721 36.0 36.0 36.0 32.0 36.0 47 34.18039516450372 36.0 36.0 36.0 32.0 36.0 48 34.1273527203155 36.0 36.0 36.0 32.0 36.0 49 34.104216614356716 36.0 36.0 36.0 32.0 36.0 50 33.51082642829937 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 4.0 20 30.0 21 59.0 22 233.0 23 630.0 24 1578.0 25 3747.0 26 7629.0 27 14027.0 28 23335.0 29 35300.0 30 50340.0 31 70430.0 32 101281.0 33 159989.0 34 326671.0 35 1139656.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.483238463538314 18.413061691985092 12.169331859246407 25.93436798523019 2 15.432265613331314 21.135873955325586 37.61473911499778 25.81712131634532 3 17.699415070488193 25.39109861111542 29.527725493479362 27.381760824917023 4 11.99586964150328 16.670430777992713 36.80949444970157 34.524205130802436 5 13.612714806291251 37.71350134190138 33.77441482711876 14.899369024688609 6 32.84322288362728 36.76520901444904 17.27559229287967 13.115975809044011 7 28.952680703277622 31.390068942706232 21.568110639089586 18.08913971492656 8 27.63438265042707 33.32649419284619 19.920452354878005 19.11867080184874 9 27.517375467204708 13.899598534713723 18.819202113584492 39.76382388449707 10 15.343949798415334 27.474948563738327 32.45040231658276 24.73069932126358 11 36.537050244452026 21.29053097253662 23.295192615791706 18.877226167219654 12 24.31980989561934 24.11820126443393 29.740399816634856 21.821589023311873 13 29.416826448502015 20.080519708723312 25.587127182895504 24.91552665987917 14 23.343252696730023 19.965208151587444 26.23399430265394 30.4575448490286 15 24.63817552498983 27.66156703863406 23.179869002561958 24.520388433814148 16 24.9164825078401 26.128881547802397 24.661020277799025 24.29361566655848 17 23.38856843697043 26.150513116420605 25.94471872785785 24.516199718751114 18 23.87350279285723 25.545289353239593 27.172629999131754 23.408577854771423 19 25.086255904575854 25.070699866662533 26.294148655772272 23.54889557298934 20 25.42393028374684 24.658475840715603 25.85851987333902 24.05907400219853 21 26.49868910731645 24.47873087603188 25.285835588785393 23.736744427866277 22 25.182240887180424 24.743880814847394 25.89952448113351 24.17435381683867 23 24.08846454792493 24.59055197057039 26.19588799961962 25.125095481885058 24 24.287376216260355 25.297750251043063 26.186000815534644 24.228872717161938 25 24.49770221633277 24.761487367874853 26.3318979507036 24.40891246508878 26 24.161227835514033 25.626042715411824 26.487865738568118 23.72486371050602 27 24.571460172646013 25.149083173370627 25.991794610988272 24.28766204299508 28 23.957671684217328 25.350009690548486 26.333690806899668 24.35862781833452 29 24.029576676453548 25.173199896842373 26.277337933736213 24.519885492967862 30 23.922729572626956 25.63034048335105 26.324806821347412 24.122123122674584 31 24.4790422999356 25.280778084785936 25.62959930783615 24.610580307442312 32 24.27292648639709 25.506077896303648 25.54644215661953 24.674553460679732 33 24.036991038567905 24.99210531892186 26.078599496497656 24.892304146012577 34 24.609836306193674 25.202117119654677 26.122426408075277 24.065620166076368 35 24.9911235309896 25.052884115952782 26.23832556976078 23.71766678329684 36 24.141051721927965 25.781266151473424 25.760799004345653 24.316883122252957 37 24.757892212548363 25.55282440996402 25.686631019359318 24.002652358128298 38 24.170362586966757 25.522188184666973 25.98089406039205 24.326555167974213 39 24.782478139279114 25.1547008754625 25.593439948978297 24.469381036280087 40 24.98306113135621 25.403083054981163 25.902850743113724 23.7110050705489 41 23.89327385037749 25.671715689111974 26.40384806211807 24.03116239839247 42 24.971277748692316 25.911217621895787 25.718443897419576 23.399060731992325 43 24.20358464432638 25.1295143985281 26.193692762491473 24.473208194654042 44 24.04931470034937 25.72064994935191 25.483224112624814 24.74681123767391 45 24.12730242077192 25.846753354143843 25.66457527959812 24.361368945486117 46 23.93393415121468 25.63147378855331 25.54795603741347 24.886636022818536 47 24.13918031939635 25.582614088583387 25.93281306527469 24.34539252674557 48 24.81922866417593 25.783463046984785 25.163431965323323 24.23387632351596 49 24.15573434986997 26.043186958121613 25.330553568696846 24.470525123311575 50 24.26012292006475 26.19198972978672 25.192773226331273 24.355114123817263 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 327.0 1 212.0 2 97.0 3 294.0 4 491.0 5 531.0 6 571.0 7 534.0 8 497.0 9 721.5 10 946.0 11 1416.0 12 1886.0 13 3265.0 14 4644.0 15 6210.0 16 7776.0 17 8240.0 18 8704.0 19 8578.0 20 8452.0 21 9412.5 22 10373.0 23 11616.0 24 12859.0 25 14184.5 26 15510.0 27 19167.0 28 22824.0 29 26465.0 30 30106.0 31 34220.5 32 38335.0 33 43662.5 34 48990.0 35 55867.0 36 62744.0 37 70870.5 38 78997.0 39 84643.0 40 90289.0 41 96986.5 42 103684.0 43 106364.0 44 109044.0 45 118368.5 46 127693.0 47 134490.5 48 141288.0 49 144724.0 50 148160.0 51 142695.0 52 137230.0 53 134533.0 54 131836.0 55 130695.5 56 129555.0 57 124773.0 58 119991.0 59 108672.0 60 97353.0 61 85083.5 62 72814.0 63 63011.0 64 53208.0 65 45194.0 66 37180.0 67 31799.5 68 26419.0 69 23613.0 70 20807.0 71 16228.5 72 11650.0 73 10024.0 74 8398.0 75 6475.5 76 4553.0 77 4005.5 78 3458.0 79 2856.0 80 2254.0 81 1829.5 82 1405.0 83 1103.5 84 802.0 85 587.5 86 373.0 87 265.5 88 158.0 89 118.5 90 79.0 91 58.5 92 38.0 93 33.5 94 29.0 95 36.0 96 43.0 97 28.0 98 13.0 99 10.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00950933387633008 2 4.13449298970873E-4 3 3.6176813659951387E-4 4 0.0 5 0.0 6 1.550434871140774E-4 7 5.1681162371359124E-5 8 0.0 9 0.0014987537087694147 10 0.0011369855721699007 11 5.1681162371359124E-5 12 2.067246494854365E-4 13 5.684927860849504E-4 14 2.584058118567956E-4 15 0.004858029262907758 16 8.785797603131052E-4 17 0.0 18 2.584058118567956E-4 19 5.1681162371359124E-5 20 6.201739484563096E-4 21 0.0 22 1.0336232474271825E-4 23 9.819420850558232E-4 24 7.235362731990277E-4 25 0.001705478358254851 26 0.004599623451050962 27 0.005943333672706299 28 0.003410956716509702 29 0.0019638841701116465 30 0.0038244060154805754 31 0.007183681569618919 32 0.0031525509046529065 33 0.004858029262907758 34 0.0024806957938252384 35 0.002584058118567956 36 0.006873594595390764 37 0.0030491885799101884 38 0.007752174355703869 39 0.004031130664966012 40 0.0021706088195970834 41 0.0023256523067111605 42 0.0015504348711407737 43 0.0010853044097985417 44 0.0010853044097985417 45 0.0010853044097985417 46 0.00118866673454126 47 0.0021189276572257244 48 0.0019638841701116465 49 2.584058118567956E-4 50 0.001292029059283978 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1934941.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.16452932374839 #Duplication Level Percentage of deduplicated Percentage of total 1 73.52542315415594 39.824699384742885 2 15.132557918396508 16.392957542286172 3 5.2599197276335286 8.547032289839066 4 2.3089443759574504 5.00251541433805 5 1.2016395056855091 3.2543119121138644 6 0.6794975572518313 2.2082799219109326 7 0.4197736324462956 1.5915788856781627 8 0.277580552247454 1.2028015969527595 9 0.2010896001023637 0.9802731187300786 >10 0.8730942410704943 7.957934106830495 >50 0.05378512416305983 2.0488422445409795 >100 0.05679767648684646 6.484284767200295 >500 0.007494765858460942 2.765043116749007 >1k 0.002402168544378506 1.7394456980873603 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2155 0.11137290491027893 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.0336232474271825E-4 0.0 5 0.0 0.0 0.0 1.5504348711407737E-4 0.0 6 0.0 0.0 0.0 1.5504348711407737E-4 0.0 7 0.0 0.0 0.0 1.5504348711407737E-4 0.0 8 0.0 0.0 0.0 2.584058118567956E-4 0.0 9 0.0 0.0 0.0 2.584058118567956E-4 0.0 10 0.0 0.0 0.0 2.584058118567956E-4 0.0 11 0.0 0.0 0.0 3.1008697422815474E-4 0.0 12 0.0 0.0 0.0 3.1008697422815474E-4 0.0 13 0.0 5.1681162371359124E-5 0.0 3.1008697422815474E-4 0.0 14 0.0 5.1681162371359124E-5 0.0 3.1008697422815474E-4 0.0 15 0.0 5.1681162371359124E-5 0.0 3.1008697422815474E-4 0.0 16 0.0 5.1681162371359124E-5 0.0 4.13449298970873E-4 0.0 17 0.0 5.1681162371359124E-5 0.0 4.13449298970873E-4 0.0 18 0.0 5.1681162371359124E-5 0.0 4.651304613422321E-4 0.0 19 0.0 5.1681162371359124E-5 0.0 5.168116237135912E-4 0.0 20 0.0 1.0336232474271825E-4 0.0 6.201739484563095E-4 0.0 21 0.0 1.0336232474271825E-4 0.0 8.26898597941746E-4 0.0 22 0.0 1.0336232474271825E-4 0.0 0.0010853044097985417 0.0 23 0.0 1.5504348711407737E-4 0.0 0.002118927657225724 0.0 24 0.0 2.067246494854365E-4 0.0 0.00356600020362378 0.0 25 0.0 2.067246494854365E-4 0.0 0.004599623451050962 0.0 26 0.0 2.067246494854365E-4 0.0 0.005788290185592222 0.0 27 0.0 2.067246494854365E-4 0.0 0.00713200040724756 0.0 28 0.0 2.067246494854365E-4 0.0 0.010491275961385903 0.0 29 0.0 2.067246494854365E-4 0.0 0.01829513147946113 0.0 30 0.0 2.067246494854365E-4 0.0 0.03498814692541013 0.0 31 0.0 2.067246494854365E-4 0.0 0.06558339504925473 0.0 32 0.0 2.067246494854365E-4 0.0 0.10057154197466486 0.0 33 0.0 2.067246494854365E-4 0.0 0.13406093519130557 0.0 34 0.0 2.067246494854365E-4 0.0 0.16972093722754336 0.0 35 0.0 2.067246494854365E-4 0.0 0.2109108236375166 0.0 36 0.0 2.067246494854365E-4 0.0 0.27117105896252136 0.0 37 0.0 2.067246494854365E-4 0.0 0.3611479626510576 0.0 38 0.0 2.067246494854365E-4 0.0 0.48058312889126853 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 5065 0.0 18.67993 1 TACGTAT 60 0.0074118385 18.334118 25 CGTCGTA 515 0.0 17.086344 10 ATACCGT 515 0.0 17.085903 6 TACCGTC 535 0.0 16.447178 7 AACGCAG 5700 0.0 16.440685 6 CCGTCGT 550 0.0 16.399008 9 CGACGGT 510 0.0 16.390741 7 CGTCTTA 135 1.0869571E-6 16.29531 15 ACGCTAT 475 0.0 16.209547 10 TACGCTA 490 0.0 16.162287 9 GATATAC 575 0.0 16.071917 1 GTATAAT 250 0.0 15.842317 1 CGCCCCT 335 0.0 15.759833 5 ACCGTCG 560 0.0 15.712929 8 GACGGTA 535 0.0 15.62482 8 ACGACGG 535 0.0 15.62482 6 AACGTCT 325 0.0 15.567886 6 AATAGCG 385 0.0 15.42724 5 TACGACG 530 0.0 15.357164 5 >>END_MODULE