##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064157_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1752769 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.13697184283839 32.0 32.0 32.0 32.0 32.0 2 31.044946025403235 32.0 32.0 32.0 32.0 32.0 3 31.264665794522838 32.0 32.0 32.0 32.0 32.0 4 31.41230475892716 32.0 32.0 32.0 32.0 32.0 5 31.295219735173315 32.0 32.0 32.0 32.0 32.0 6 34.877597104923694 36.0 36.0 36.0 36.0 36.0 7 34.91350657160185 36.0 36.0 36.0 36.0 36.0 8 34.83044599716221 36.0 36.0 36.0 32.0 36.0 9 35.014547267780294 36.0 36.0 36.0 36.0 36.0 10 34.785761843117946 36.0 36.0 36.0 32.0 36.0 11 35.02002203370781 36.0 36.0 36.0 36.0 36.0 12 34.89441506553345 36.0 36.0 36.0 32.0 36.0 13 34.96633269985948 36.0 36.0 36.0 36.0 36.0 14 34.895893297975945 36.0 36.0 36.0 32.0 36.0 15 34.8352663699552 36.0 36.0 36.0 32.0 36.0 16 34.86643305535413 36.0 36.0 36.0 32.0 36.0 17 34.82609174397767 36.0 36.0 36.0 32.0 36.0 18 34.82647342576232 36.0 36.0 36.0 32.0 36.0 19 34.83313659700736 36.0 36.0 36.0 32.0 36.0 20 34.826476848917345 36.0 36.0 36.0 32.0 36.0 21 34.82351239667064 36.0 36.0 36.0 32.0 36.0 22 34.80632872899966 36.0 36.0 36.0 32.0 36.0 23 34.744812351199734 36.0 36.0 36.0 32.0 36.0 24 34.72086681131398 36.0 36.0 36.0 32.0 36.0 25 34.691291322473184 36.0 36.0 36.0 32.0 36.0 26 34.625840598504425 36.0 36.0 36.0 32.0 36.0 27 34.62105274568412 36.0 36.0 36.0 32.0 36.0 28 34.60182944814748 36.0 36.0 36.0 32.0 36.0 29 34.56945153639755 36.0 36.0 36.0 32.0 36.0 30 34.54865815175873 36.0 36.0 36.0 32.0 36.0 31 34.54909688612704 36.0 36.0 36.0 32.0 36.0 32 34.495521086920185 36.0 36.0 36.0 32.0 36.0 33 34.47245986208108 36.0 36.0 36.0 32.0 36.0 34 34.461169155775806 36.0 36.0 36.0 32.0 36.0 35 34.42236427047717 36.0 36.0 36.0 32.0 36.0 36 34.39104810730906 36.0 36.0 36.0 32.0 36.0 37 34.38951453386042 36.0 36.0 36.0 32.0 36.0 38 34.34382340171466 36.0 36.0 36.0 32.0 36.0 39 34.34606670930396 36.0 36.0 36.0 32.0 36.0 40 34.32474330616299 36.0 36.0 36.0 32.0 36.0 41 34.30197761370722 36.0 36.0 36.0 32.0 36.0 42 34.23802509058524 36.0 36.0 36.0 32.0 36.0 43 34.22921845377229 36.0 36.0 36.0 32.0 36.0 44 34.172835096923784 36.0 36.0 36.0 32.0 36.0 45 34.13312935132924 36.0 36.0 36.0 32.0 36.0 46 34.11130616755545 36.0 36.0 36.0 32.0 36.0 47 34.08846744779261 36.0 36.0 36.0 32.0 36.0 48 34.038034104893455 36.0 36.0 36.0 32.0 36.0 49 34.019256958560995 36.0 36.0 36.0 32.0 36.0 50 33.3398730808224 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 0.0 18 1.0 19 3.0 20 10.0 21 52.0 22 120.0 23 431.0 24 1275.0 25 3002.0 26 6225.0 27 11725.0 28 20217.0 29 33007.0 30 49856.0 31 75368.0 32 113684.0 33 191529.0 34 382205.0 35 864058.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.797143514109834 17.749022476340016 11.831844819509735 25.621989190040413 2 15.759601999132796 20.390641046121548 38.11149273146352 25.738264223282137 3 18.307344811985203 24.64300609153216 29.17534107616498 27.874308020317656 4 12.184891448901709 16.371010669403667 36.7358733523927 34.70822452930192 5 14.112641198012973 37.204560327116695 33.768397318756776 14.914401156113556 6 33.9640693828672 36.40421117010989 16.864762971918115 12.76695647510479 7 29.80193054532571 30.92347023481132 20.940922620151316 18.33367659971166 8 27.659834239423446 34.07254464222039 19.164076954806937 19.10354416354922 9 27.381050186106908 13.985802929786006 18.210064606824908 40.42308227728218 10 14.912654549728341 27.50832547426819 32.6738564988906 24.90516347711286 11 37.15631503998247 21.07797495161938 22.844152791470407 18.921557216927738 12 24.39960610828827 23.581641816420447 29.794849968563973 22.22390210672731 13 29.633726864384975 19.857447926502328 25.25355681287202 25.255268396240677 14 23.059052411475584 19.6364030546023 25.84254021503168 31.46200431889044 15 24.750372138215756 27.81511363266806 22.56524043637592 24.86927379274027 16 25.132862113801284 26.209337632084768 24.33942640080741 24.318373853306532 17 23.632562894804103 26.213166830978203 25.740714116186513 24.413556158031184 18 24.154450736721273 25.660869733894888 26.620609938805295 23.564069590578548 19 25.104220807191364 25.255296048709212 25.7507406851673 23.889742458932123 20 25.461159454025545 24.890800544970322 25.446667990296422 24.201372010707708 21 26.304835377622492 24.62885868017976 24.87270142272028 24.193604519477464 22 25.34337156243332 24.917929717942954 25.39431960683856 24.344379112785163 23 24.26066392621901 24.742990320951876 25.725158393500518 25.2711873593286 24 24.553291003974866 25.24111930705977 25.697769749817862 24.507819939147506 25 24.721806364449638 24.88828893798039 25.72617895678528 24.66372574078469 26 24.257498897409754 25.744127173586218 25.99545498892845 24.002918940075578 27 24.643201515402215 25.31212378827731 25.56961664203758 24.475058054282893 28 24.137604445699647 25.39326355547568 25.86676023632043 24.602371762504244 29 24.35493156069905 25.202242684374752 25.637679927381484 24.805145827544713 30 24.17596273660476 25.555139692088602 25.893757787930934 24.375139783375705 31 24.802328354598227 25.17758781824593 25.2979766685267 24.722107158629143 32 24.517775881034648 25.41250359442966 25.132993897457194 24.936726627078492 33 24.16557311576425 25.12358076111143 25.747874707593997 24.962971415530326 34 24.711092397372543 25.35295080854191 25.76362608352832 24.17233071055723 35 25.143861947302536 25.15823958391576 25.641944358546308 24.055954110235394 36 24.34434811385078 25.679130685335593 25.393676414790217 24.58284478602341 37 24.912706708232726 25.41107723345307 25.29902231513221 24.377193743181994 38 24.397054510722644 25.425955954596652 25.58708375792944 24.589905776751266 39 24.898798938094906 25.20729457824761 25.26018443554769 24.633722048109803 40 25.218971938728934 25.347799098095773 25.47109205265368 23.962136910521608 41 24.398860509393153 25.497785433211256 25.892316654238318 24.211037403157277 42 25.134005008178654 25.839132372129697 25.301800103039085 23.725062516652564 43 24.556824230764622 25.105277601387993 25.70764634028756 24.630251827559825 44 24.276536870631865 25.595606903437456 25.22105263157895 24.906803594351736 45 24.41437607046315 25.750336899927312 25.354843200326798 24.480443829282734 46 24.38548066126868 25.342718194017177 25.30437848594667 24.967422658767468 47 24.66599228973789 25.39502684100052 25.501774661114183 24.43720620814741 48 25.107446117191433 25.539284514123324 24.947582041593186 24.405687327092053 49 24.593113843685654 25.667531776971558 25.00058479098429 24.738769588358494 50 24.701083840298867 25.781843264494803 24.95320208426877 24.56387081093756 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 15.0 1 20.0 2 25.0 3 81.5 4 138.0 5 167.0 6 196.0 7 199.0 8 202.0 9 277.5 10 353.0 11 536.0 12 719.0 13 1319.0 14 1919.0 15 2750.5 16 3582.0 17 3902.5 18 4223.0 19 4457.5 20 4692.0 21 5441.0 22 6190.0 23 7380.0 24 8570.0 25 10072.0 26 11574.0 27 14930.0 28 18286.0 29 21753.5 30 25221.0 31 28754.5 32 32288.0 33 37951.0 34 43614.0 35 50193.0 36 56772.0 37 64317.5 38 71863.0 39 77082.0 40 82301.0 41 88535.0 42 94769.0 43 98552.0 44 102335.0 45 110257.0 46 118179.0 47 124615.0 48 131051.0 49 134096.0 50 137141.0 51 134945.5 52 132750.0 53 129771.5 54 126793.0 55 124454.0 56 122115.0 57 116730.0 58 111345.0 59 100091.0 60 88837.0 61 77717.5 62 66598.0 63 57227.5 64 47857.0 65 40433.0 66 33009.0 67 27687.0 68 22365.0 69 19972.0 70 17579.0 71 13693.0 72 9807.0 73 8233.5 74 6660.0 75 5256.5 76 3853.0 77 3333.0 78 2813.0 79 2289.5 80 1766.0 81 1387.0 82 1008.0 83 869.5 84 731.0 85 517.0 86 303.0 87 216.0 88 129.0 89 106.5 90 84.0 91 69.5 92 55.0 93 43.0 94 31.0 95 30.0 96 29.0 97 24.5 98 20.0 99 17.0 100 14.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007188625540501914 2 5.13473252892994E-4 3 4.564206692382168E-4 4 0.0 5 0.0 6 1.141051673095542E-4 7 0.0 8 0.0 9 7.416835875121023E-4 10 9.128413384764336E-4 11 5.70525836547771E-5 12 1.711577509643313E-4 13 3.423155019286626E-4 14 2.282103346191084E-4 15 0.003423155019286626 16 6.846310038573252E-4 17 5.70525836547771E-5 18 1.711577509643313E-4 19 0.0 20 7.416835875121023E-4 21 0.0 22 1.711577509643313E-4 23 7.987361711668794E-4 24 3.423155019286626E-4 25 0.0018827352606076442 26 0.004450101525072614 27 0.005648205781822933 28 0.0036513653539057343 29 0.0027385240154293006 30 0.0032519972683222945 31 0.006561047120299366 32 0.0032519972683222945 33 0.00393662827217962 34 0.0026244188481197466 35 0.0026814714317745236 36 0.00707452037319236 37 0.0032519972683222945 38 0.007017467789537583 39 0.003993680855834397 40 0.0018827352606076442 41 0.0031949446846675175 42 0.002053893011571976 43 0.001255156840405096 44 0.001083999089440765 45 0.0013122094240598733 46 9.698939221312107E-4 47 0.0022821033461910838 48 0.001711577509643313 49 3.423155019286626E-4 50 0.0011410516730955419 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1752769.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.65657685549027 #Duplication Level Percentage of deduplicated Percentage of total 1 77.06789724213496 45.97606934916452 2 13.770306558023007 16.429787030047226 3 4.367112542581943 7.815809550993458 4 1.7998912280085384 4.295013975008565 5 0.9112571967648293 2.7181242496959834 6 0.5320895432702871 1.9045584439263963 7 0.3350667236490228 1.3992253625759676 8 0.22131110726169018 1.0562130463464539 9 0.15509959553253302 0.8327439847027811 >10 0.7406366498340811 7.726266612260427 >50 0.05047249080681101 2.0912728304116848 >100 0.04328125882778576 5.26148133178485 >500 0.004616162734792599 1.8283233735958118 >1k 9.617005697484581E-4 0.6651108594858869 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.141051673095542E-4 2 0.0 0.0 0.0 0.0 1.141051673095542E-4 3 0.0 0.0 0.0 0.0 1.141051673095542E-4 4 0.0 0.0 0.0 0.0 1.711577509643313E-4 5 0.0 0.0 0.0 0.0 1.711577509643313E-4 6 0.0 0.0 0.0 0.0 3.423155019286626E-4 7 0.0 0.0 0.0 0.0 3.423155019286626E-4 8 0.0 0.0 0.0 0.0 3.423155019286626E-4 9 0.0 0.0 0.0 0.0 3.423155019286626E-4 10 0.0 0.0 0.0 0.0 3.423155019286626E-4 11 0.0 0.0 0.0 5.70525836547771E-5 3.423155019286626E-4 12 0.0 0.0 0.0 5.70525836547771E-5 3.423155019286626E-4 13 0.0 0.0 0.0 5.70525836547771E-5 3.993680855834397E-4 14 0.0 0.0 0.0 5.70525836547771E-5 3.993680855834397E-4 15 0.0 0.0 0.0 5.70525836547771E-5 4.564206692382168E-4 16 0.0 0.0 0.0 5.70525836547771E-5 4.564206692382168E-4 17 0.0 0.0 0.0 5.70525836547771E-5 4.564206692382168E-4 18 0.0 0.0 0.0 5.70525836547771E-5 4.564206692382168E-4 19 0.0 0.0 0.0 1.141051673095542E-4 4.564206692382168E-4 20 0.0 0.0 0.0 1.141051673095542E-4 5.134732528929938E-4 21 0.0 0.0 0.0 1.141051673095542E-4 5.705258365477709E-4 22 0.0 0.0 0.0 1.711577509643313E-4 6.846310038573252E-4 23 0.0 0.0 0.0 2.8526291827388547E-4 6.846310038573252E-4 24 0.0 0.0 0.0 5.705258365477709E-4 6.846310038573252E-4 25 0.0 0.0 0.0 6.846310038573252E-4 6.846310038573252E-4 26 0.0 0.0 0.0 8.557887548216565E-4 7.987361711668794E-4 27 0.0 0.0 0.0 9.128413384764336E-4 7.987361711668794E-4 28 0.0 0.0 0.0 0.0014833671750242045 7.987361711668794E-4 29 0.0 0.0 0.0 0.002110945595226753 7.987361711668794E-4 30 0.0 0.0 0.0 0.003480207602941403 7.987361711668794E-4 31 0.0 0.0 0.0 0.00867199271552612 7.987361711668794E-4 32 0.0 0.0 0.0 0.014491356248313382 7.987361711668794E-4 33 0.0 0.0 0.0 0.021166508535922304 7.987361711668794E-4 34 0.0 0.0 0.0 0.02852629182738855 8.557887548216565E-4 35 0.0 0.0 0.0 0.03862459913428409 8.557887548216565E-4 36 0.0 0.0 0.0 0.05323006054990703 8.557887548216565E-4 37 0.0 0.0 0.0 0.07371193808197202 8.557887548216565E-4 38 0.0 0.0 0.0 0.10360749191707522 8.557887548216565E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTTCG 50 0.0025785752 22.00341 27 GTATCAA 2825 0.0 20.4805 1 TACGAAT 445 0.0 20.268755 41 ATACGAA 440 0.0 19.999105 40 CGAATGC 450 0.0 19.06527 43 CGCAATA 485 0.0 18.145071 36 GTAGGAC 660 0.0 17.664867 3 TAAACGC 355 0.0 17.354307 28 TCTAGCG 495 0.0 17.335526 28 CTAGCGG 495 0.0 17.335526 29 GATATAC 525 0.0 17.180183 1 TAGCGGC 500 0.0 17.16266 30 CAATACG 515 0.0 17.08759 38 AACGCAG 3350 0.0 16.876856 6 TAGGACG 550 0.0 16.798769 4 GTCCTAA 485 0.0 16.782755 1 CGAGCCG 485 0.0 16.782755 15 TATACCG 80 0.001989426 16.499262 5 AATACGA 535 0.0 16.447863 39 GCGCAAT 540 0.0 16.29696 35 >>END_MODULE