##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064156_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2826254 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.366427079802452 32.0 32.0 32.0 32.0 32.0 2 31.434752502782835 32.0 32.0 32.0 32.0 32.0 3 31.499434941091636 32.0 32.0 32.0 32.0 32.0 4 31.578543188262625 32.0 32.0 32.0 32.0 32.0 5 31.536623742947377 32.0 32.0 32.0 32.0 32.0 6 35.131162662662305 36.0 36.0 36.0 36.0 36.0 7 35.15350566509592 36.0 36.0 36.0 36.0 36.0 8 35.0950041999056 36.0 36.0 36.0 36.0 36.0 9 35.20437618133402 36.0 36.0 36.0 36.0 36.0 10 35.06556735523417 36.0 36.0 36.0 36.0 36.0 11 35.20103748636888 36.0 36.0 36.0 36.0 36.0 12 35.10630679337385 36.0 36.0 36.0 36.0 36.0 13 35.1490832034205 36.0 36.0 36.0 36.0 36.0 14 35.08914945365845 36.0 36.0 36.0 36.0 36.0 15 35.06925952161412 36.0 36.0 36.0 36.0 36.0 16 35.07903040561818 36.0 36.0 36.0 36.0 36.0 17 35.04246610531113 36.0 36.0 36.0 36.0 36.0 18 35.04458657997476 36.0 36.0 36.0 36.0 36.0 19 35.03779985804531 36.0 36.0 36.0 36.0 36.0 20 35.037317240417885 36.0 36.0 36.0 36.0 36.0 21 35.029432598768544 36.0 36.0 36.0 36.0 36.0 22 35.01551912885395 36.0 36.0 36.0 36.0 36.0 23 34.963185191422994 36.0 36.0 36.0 36.0 36.0 24 34.93490004790794 36.0 36.0 36.0 36.0 36.0 25 34.90606753674652 36.0 36.0 36.0 32.0 36.0 26 34.857649737072464 36.0 36.0 36.0 32.0 36.0 27 34.84722356872383 36.0 36.0 36.0 32.0 36.0 28 34.83488108287507 36.0 36.0 36.0 32.0 36.0 29 34.80294729348459 36.0 36.0 36.0 32.0 36.0 30 34.78871113495107 36.0 36.0 36.0 32.0 36.0 31 34.786755189024056 36.0 36.0 36.0 32.0 36.0 32 34.74360195509674 36.0 36.0 36.0 32.0 36.0 33 34.727237183919065 36.0 36.0 36.0 32.0 36.0 34 34.722309459800854 36.0 36.0 36.0 32.0 36.0 35 34.68958840925126 36.0 36.0 36.0 32.0 36.0 36 34.665691052538094 36.0 36.0 36.0 32.0 36.0 37 34.66158031089916 36.0 36.0 36.0 32.0 36.0 38 34.62627668992242 36.0 36.0 36.0 32.0 36.0 39 34.627025030305134 36.0 36.0 36.0 32.0 36.0 40 34.6103011265088 36.0 36.0 36.0 32.0 36.0 41 34.59950697991051 36.0 36.0 36.0 32.0 36.0 42 34.54338322033335 36.0 36.0 36.0 32.0 36.0 43 34.53162949968404 36.0 36.0 36.0 32.0 36.0 44 34.47808724905829 36.0 36.0 36.0 32.0 36.0 45 34.456425714037024 36.0 36.0 36.0 32.0 36.0 46 34.445676149418986 36.0 36.0 36.0 32.0 36.0 47 34.41705168749872 36.0 36.0 36.0 32.0 36.0 48 34.377901986162605 36.0 36.0 36.0 32.0 36.0 49 34.36529979258764 36.0 36.0 36.0 32.0 36.0 50 33.77536803132344 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 5.0 19 7.0 20 30.0 21 82.0 22 272.0 23 850.0 24 2113.0 25 4797.0 26 9910.0 27 17740.0 28 29648.0 29 45589.0 30 66192.0 31 94992.0 32 138203.0 33 224242.0 34 477434.0 35 1714146.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.6928253056984 17.791441435703195 11.988196694395022 26.527536564203384 2 16.303286345108695 19.889322916666664 36.448426177536234 27.358964560688403 3 18.08153424611004 23.488490748157982 28.91791520064764 29.51205980508434 4 12.465404737153845 15.8742632473939 35.5320505517197 36.128281463732556 5 14.561677754370272 36.532845243208854 33.27195644835885 15.63352055406202 6 34.97518975661052 35.39447296277897 16.26344713776408 13.366890142846428 7 30.727525616090006 30.371612429327755 20.25885174388262 18.642010210699617 8 28.567354526521676 32.66666761020064 18.829871625126405 19.93610623815128 9 27.447882647410783 13.95904349912144 18.06428237312196 40.528791480345824 10 15.923967810053272 26.666109975713177 31.3630129812782 26.04690923295535 11 37.70032700528685 20.834857730409226 22.081490198687025 19.38332506561689 12 24.73309193016622 23.420647967238615 28.388212807482976 23.458047295112188 13 29.62999918265878 19.170048371739526 25.071287369035222 26.12866507656647 14 23.802723610949926 19.184516008503145 24.856169734573893 32.15659064597304 15 25.50178194335147 26.874331240481673 21.821304625975895 25.80258219019096 16 26.201920014945717 25.679952219000025 23.092616731558813 25.025511034495445 17 24.549881220866915 25.81671711035172 24.555967014995822 25.07743465378554 18 25.264157919784026 24.91928336007671 25.42299057583472 24.393568144304545 19 25.980370476386934 24.65150855213599 24.901769232973837 24.466351738503242 20 26.183985147752896 24.00182716323708 24.435548444416767 25.378639244593256 21 27.254521355830015 23.907865322791228 24.091500622378597 24.74611269900016 22 26.311755860238833 23.881220698805837 24.588872180451126 25.2181512605042 23 24.97841652289476 23.825752697226985 25.111349512213415 26.084481267664838 24 25.21953149159698 24.63607201920852 24.74572277147849 25.398673717716008 25 25.370267234967635 24.154784406776304 24.84341175896132 25.63153659929474 26 25.21065286198801 24.811975535146555 25.005104216241847 24.972267386623592 27 25.815205371988704 24.45469268775298 24.34761808548771 25.382483854770605 28 25.162217839327024 24.33777119164032 25.17078076159055 25.329230207442098 29 25.15030847204786 24.50261624492072 24.993064863342422 25.354010419688993 30 25.010385182343985 24.66241965194955 25.24926206821879 25.07793309748767 31 25.648254172251605 24.34640268473475 24.39229709856719 25.61304604444646 32 25.473370153469126 24.375807408681215 24.230911717656152 25.919910720193506 33 25.07330719385334 24.201263852467747 24.678490411415506 26.046938542263405 34 25.71208992466177 24.15883161346662 24.94126363851237 25.18781482335924 35 26.094465521231175 24.082310572526673 24.834564326187984 24.988659580054165 36 25.11613390855357 24.716706864143852 24.52017800122291 25.646981226079667 37 25.98566035572763 24.330264023401437 24.500707853189727 25.183367767681204 38 25.180243315648994 24.185176365098737 24.98824327035595 25.646337048896317 39 25.84436603371944 24.173962827088783 24.362205181335415 25.619465957856356 40 25.955136805991952 24.37495400170972 24.730202335863947 24.93970685643438 41 25.084593792338914 24.735320416127507 24.982370027383514 25.197715764150065 42 26.15185980386468 24.66156112846453 24.590264283075722 24.59631478459507 43 25.53106419475963 23.851749267217038 24.906907195921608 25.710279342101728 44 25.185230003651526 24.383309697489505 24.603215040888596 25.828245257970373 45 25.314615786075063 24.57083211704659 24.6390857061982 25.475466390680147 46 25.161628399043817 24.40125311545108 24.806031768047678 25.631086717457425 47 25.250494833002264 24.35130347893961 25.002176062183718 25.396025625874408 48 25.888985838925656 24.837573305196592 24.269707925630122 25.003732930247637 49 25.229845363888803 24.817390405937484 24.489889068475236 25.462875161698477 50 25.200170262814027 24.948208189103536 24.519225155587733 25.332396392494704 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 31.0 1 41.0 2 51.0 3 149.5 4 248.0 5 314.5 6 381.0 7 337.5 8 294.0 9 417.0 10 540.0 11 773.0 12 1006.0 13 1955.0 14 2904.0 15 3844.5 16 4785.0 17 4723.5 18 4662.0 19 4747.5 20 4833.0 21 5673.5 22 6514.0 23 7855.5 24 9197.0 25 11645.0 26 14093.0 27 17434.5 28 20776.0 29 24588.5 30 28401.0 31 32423.5 32 36446.0 33 42680.0 34 48914.0 35 57123.5 36 65333.0 37 78425.5 38 91518.0 39 102597.5 40 113677.0 41 126623.5 42 139570.0 43 147081.5 44 154593.0 45 169842.0 46 185091.0 47 199078.5 48 213066.0 49 221174.0 50 229282.0 51 225997.5 52 222713.0 53 220079.0 54 217445.0 55 216313.5 56 215182.0 57 208419.0 58 201656.0 59 184609.0 60 167562.0 61 147014.0 62 126466.0 63 110268.0 64 94070.0 65 79870.5 66 65671.0 67 56387.5 68 47104.0 69 41909.0 70 36714.0 71 28376.5 72 20039.0 73 17078.0 74 14117.0 75 10963.0 76 7809.0 77 6618.0 78 5427.0 79 4555.0 80 3683.0 81 2884.5 82 2086.0 83 1649.0 84 1212.0 85 867.0 86 522.0 87 377.0 88 232.0 89 175.5 90 119.0 91 94.5 92 70.0 93 54.0 94 38.0 95 49.5 96 61.0 97 46.5 98 32.0 99 25.0 100 18.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009411751385402728 2 4.953553360738278E-4 3 2.1229514403164047E-4 4 0.0 5 0.0 6 7.076504801054682E-5 7 1.0614757201582023E-4 8 0.0 9 0.001273770864189843 10 0.0010614757201582023 11 0.0 12 0.0 13 6.01502908089648E-4 14 2.1229514403164047E-4 15 0.00445819802466445 16 9.199456241371087E-4 17 0.0 18 3.1844271604746074E-4 19 3.538252400527341E-5 20 5.307378600791011E-4 21 0.0 22 1.4153009602109365E-4 23 6.368854320949215E-4 24 2.830601920421873E-4 25 0.0018398912482742173 26 0.005625821316838473 27 0.0066165319889861275 28 0.004104372784611716 29 0.0023352465843480452 30 0.003962842688590622 31 0.007147269849065229 32 0.0029367494924376933 33 0.004705875692701364 34 0.0023352465843480452 35 0.002830601920421873 36 0.007288799945086323 37 0.0036443999725431614 38 0.007536477613123237 39 0.0038920776405800754 40 0.0021937164883269514 41 0.0035736349245326145 42 0.0014860660082214833 43 0.0014860660082214833 44 0.0013445359122003897 45 0.001026093196152929 46 6.368854320949215E-4 47 0.0016983611522531237 48 0.001981421344295311 49 2.1229514403164047E-4 50 0.0012383883401845693 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2826254.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.805026964151494 #Duplication Level Percentage of deduplicated Percentage of total 1 78.22045986381808 42.08653952121061 2 12.568832431407506 13.525327357595653 3 3.7682561996839734 6.082533792954817 4 1.69551793176359 3.649095521469693 5 0.922315559909567 2.481260678519537 6 0.58013929159688 1.8728646136400326 7 0.4019651515880353 1.5139422073890436 8 0.27787291274583914 1.1960767650317754 9 0.22297179258806427 1.079730298120139 >10 1.1994553137134034 11.498815513073115 >50 0.07648285149190259 2.851852697829159 >100 0.053704828829919816 6.016741741718085 >500 0.008457755332544184 3.1482294399702857 >1k 0.003568115530871992 2.996989851478028 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 3.538252400527341E-5 3.538252400527341E-5 5 0.0 7.076504801054682E-5 0.0 3.538252400527341E-5 3.538252400527341E-5 6 0.0 7.076504801054682E-5 0.0 3.538252400527341E-5 3.538252400527341E-5 7 0.0 7.076504801054682E-5 0.0 3.538252400527341E-5 3.538252400527341E-5 8 0.0 7.076504801054682E-5 0.0 1.0614757201582023E-4 3.538252400527341E-5 9 0.0 7.076504801054682E-5 0.0 1.0614757201582023E-4 3.538252400527341E-5 10 0.0 7.076504801054682E-5 0.0 1.0614757201582023E-4 3.538252400527341E-5 11 0.0 7.076504801054682E-5 0.0 1.0614757201582023E-4 1.0614757201582023E-4 12 0.0 7.076504801054682E-5 0.0 1.4153009602109365E-4 3.184427160474607E-4 13 0.0 1.0614757201582023E-4 0.0 1.7691262002636704E-4 4.2459028806328094E-4 14 0.0 1.0614757201582023E-4 0.0 1.7691262002636704E-4 4.2459028806328094E-4 15 0.0 1.0614757201582023E-4 0.0 1.7691262002636704E-4 4.5997281206855433E-4 16 0.0 1.0614757201582023E-4 0.0 2.1229514403164047E-4 5.307378600791011E-4 17 0.0 1.0614757201582023E-4 0.0 2.1229514403164047E-4 5.307378600791011E-4 18 0.0 1.0614757201582023E-4 0.0 2.830601920421873E-4 6.01502908089648E-4 19 0.0 1.0614757201582023E-4 0.0 2.830601920421873E-4 6.01502908089648E-4 20 0.0 1.0614757201582023E-4 0.0 3.184427160474607E-4 6.722679561001948E-4 21 0.0 1.0614757201582023E-4 0.0 3.184427160474607E-4 7.076504801054682E-4 22 0.0 1.0614757201582023E-4 0.0 4.2459028806328094E-4 7.076504801054682E-4 23 0.0 1.0614757201582023E-4 0.0 6.01502908089648E-4 7.430330041107416E-4 24 0.0 1.0614757201582023E-4 0.0 7.784155281160151E-4 7.430330041107416E-4 25 0.0 1.0614757201582023E-4 0.0 8.491805761265619E-4 7.784155281160151E-4 26 0.0 1.0614757201582023E-4 0.0 0.0010614757201582023 8.491805761265619E-4 27 0.0 1.0614757201582023E-4 0.0 0.0012737708641898428 8.491805761265619E-4 28 0.0 1.0614757201582023E-4 0.0 0.0028659844444271464 8.845631001318353E-4 29 0.0 1.0614757201582023E-4 0.0 0.007076504801054683 8.845631001318353E-4 30 0.0 1.0614757201582023E-4 0.0 0.013339211549988076 8.845631001318353E-4 31 0.0 1.0614757201582023E-4 0.0 0.03251653956084626 9.199456241371087E-4 32 0.0 1.0614757201582023E-4 0.0 0.0505616268035357 9.199456241371087E-4 33 0.0 1.0614757201582023E-4 0.0 0.07055275286651518 9.553281481423821E-4 34 0.0 1.0614757201582023E-4 0.0 0.09539128471821712 0.0011676232921740226 35 0.0 1.0614757201582023E-4 0.0 0.1237680689704464 0.0011676232921740226 36 0.0 1.0614757201582023E-4 0.0 0.16063665898394128 0.0011676232921740226 37 0.0 1.0614757201582023E-4 0.0 0.22096386241293245 0.0011676232921740226 38 0.0 1.0614757201582023E-4 0.0 0.3023790501490666 0.001203005816179296 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3635 0.0 27.11381 1 GGTATCA 1555 0.0 24.051128 1 CGTCGTA 770 0.0 20.856499 10 ACCGTCG 855 0.0 19.55426 8 TACCGTC 880 0.0 18.748425 7 CCGTCGT 895 0.0 18.18906 9 TCAACGC 5380 0.0 18.154608 4 AACGCAG 5445 0.0 17.937887 6 ATCAACG 5505 0.0 17.78234 3 CAACGCA 5520 0.0 17.694166 5 AGTATCG 100 2.486714E-5 17.598522 5 ATACCGT 945 0.0 17.45885 6 TATCAAC 5635 0.0 17.411137 2 GTCGTAG 975 0.0 17.148188 11 CTCGCGT 90 2.2163175E-4 17.111488 24 CGCAATA 750 0.0 16.721554 36 ATACGAA 780 0.0 16.076994 40 TACGAAT 830 0.0 15.638346 41 GTATTAT 340 0.0 15.529206 1 ACGCGAG 100 4.943777E-4 15.401158 37 >>END_MODULE