##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064154_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1936454 Sequences flagged as poor quality 0 Sequence length 50 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.394573276721264 32.0 32.0 32.0 32.0 32.0 2 31.545819833572086 32.0 32.0 32.0 32.0 32.0 3 31.586079504083237 32.0 32.0 32.0 32.0 32.0 4 31.649348241682993 32.0 32.0 32.0 32.0 32.0 5 31.637862298820423 32.0 32.0 32.0 32.0 32.0 6 35.25880656085815 36.0 36.0 36.0 36.0 36.0 7 35.274834826956905 36.0 36.0 36.0 36.0 36.0 8 35.21880509425992 36.0 36.0 36.0 36.0 36.0 9 35.31122247158982 36.0 36.0 36.0 36.0 36.0 10 35.215965884033395 36.0 36.0 36.0 36.0 36.0 11 35.29936419868481 36.0 36.0 36.0 36.0 36.0 12 35.25771074345169 36.0 36.0 36.0 36.0 36.0 13 35.27127935907592 36.0 36.0 36.0 36.0 36.0 14 35.23434225651629 36.0 36.0 36.0 36.0 36.0 15 35.20528347174785 36.0 36.0 36.0 36.0 36.0 16 35.23614761827547 36.0 36.0 36.0 36.0 36.0 17 35.25242376013063 36.0 36.0 36.0 36.0 36.0 18 35.24478867042543 36.0 36.0 36.0 36.0 36.0 19 35.17996916012464 36.0 36.0 36.0 36.0 36.0 20 35.16469536585945 36.0 36.0 36.0 36.0 36.0 21 35.12970047313285 36.0 36.0 36.0 36.0 36.0 22 35.08443164671095 36.0 36.0 36.0 36.0 36.0 23 35.100164527533316 36.0 36.0 36.0 36.0 36.0 24 35.07471336783626 36.0 36.0 36.0 36.0 36.0 25 35.024965736340754 36.0 36.0 36.0 36.0 36.0 26 34.99397765193493 36.0 36.0 36.0 36.0 36.0 27 34.89463111439776 36.0 36.0 36.0 36.0 36.0 28 34.824255055890816 36.0 36.0 36.0 36.0 36.0 29 34.80366226101937 36.0 36.0 36.0 32.0 36.0 30 34.706269294287395 36.0 36.0 36.0 32.0 36.0 31 34.701169767007116 36.0 36.0 36.0 32.0 36.0 32 34.6580621073364 36.0 36.0 36.0 32.0 36.0 33 34.738030441208515 36.0 36.0 36.0 32.0 36.0 34 34.686097888201836 36.0 36.0 36.0 32.0 36.0 35 34.67386986729352 36.0 36.0 36.0 32.0 36.0 36 34.57500875311265 36.0 36.0 36.0 32.0 36.0 37 34.436840224451494 36.0 36.0 36.0 32.0 36.0 38 34.37017610539677 36.0 36.0 36.0 32.0 36.0 39 34.11902322492556 36.0 36.0 36.0 32.0 36.0 40 34.257690087138656 36.0 36.0 36.0 32.0 36.0 41 34.236405305780565 36.0 36.0 36.0 32.0 36.0 42 34.23227094472681 36.0 36.0 36.0 32.0 36.0 43 34.25864750724779 36.0 36.0 36.0 32.0 36.0 44 34.08565501685039 36.0 36.0 36.0 32.0 36.0 45 34.063226908565866 36.0 36.0 36.0 32.0 36.0 46 33.80709430742997 36.0 36.0 36.0 32.0 36.0 47 33.8713772699997 36.0 36.0 36.0 32.0 36.0 48 33.77859066107431 36.0 36.0 36.0 27.0 36.0 49 33.719927248465495 36.0 36.0 36.0 27.0 36.0 50 33.32285713990624 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 3.0 20 12.0 21 37.0 22 97.0 23 374.0 24 1034.0 25 2665.0 26 6069.0 27 12361.0 28 21957.0 29 34565.0 30 50519.0 31 72281.0 32 103665.0 33 164943.0 34 331843.0 35 1134028.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.74235579627025 21.67336080538313 13.184001619607999 26.400281778738616 2 9.478333526126185 21.25567017549658 51.73828576858248 17.527710529794756 3 18.950096155633727 27.572550510110283 31.475477731346736 22.001875602909248 4 9.744718955368938 18.944111246639476 42.05093433667931 29.260235461312273 5 8.545929828438991 42.70496484811929 38.09024123475177 10.658864088689946 6 28.096413540241162 41.11208655013039 19.688450515117868 11.103049394510574 7 24.687263097665216 32.5080611344872 24.168840745858923 18.63583502198867 8 19.59865816590531 48.74647164352987 20.116976700711714 11.537893489853102 9 26.068872846593877 14.477519986738338 21.87575042256052 37.577856744107265 10 15.079777798548989 30.62726930487425 36.957438930491556 17.335513966085205 11 32.552232069545674 18.875842132062008 32.82685775133311 15.745068047059213 12 26.886687953052213 22.659827343761698 37.192923748572774 13.260560954613315 13 31.81346604415007 24.381481284480135 26.637372375404155 17.16768029596564 14 16.425967984648164 28.556231364055595 28.0351737151462 26.98262693615004 15 17.330976346991356 45.41841413654718 21.848499073782865 15.402110442678598 16 14.923157959967776 28.175517960794032 39.56084360992336 17.340480469314826 17 16.101182883765894 34.30605632770001 33.03352416323858 16.559236625295515 18 16.218466087633693 27.371572782523867 42.768637613113086 13.64132351672935 19 24.834852606726116 24.370911336815993 28.32980110015637 22.464434956301524 20 23.85980259661926 31.204255642180676 31.17895148883958 13.75699027236048 21 19.24114902806883 26.960051723407837 27.686069485771412 26.11272976275192 22 22.560458571096596 35.57138061917426 27.93627514265796 13.931885667071187 23 16.37347445806564 35.32910599485758 32.168517224622676 16.12890232245411 24 24.114473569377317 27.94659497523041 33.24041401597875 14.698517439413525 25 19.582818208014572 32.138036027270914 33.215383836787645 15.063761927926866 26 13.335629745387465 34.91773714930225 35.513960773701506 16.232672331608786 27 16.051974477556826 33.787851792174386 32.71035228924747 17.44982144102131 28 14.890272337370924 35.03900309081097 29.119828959633544 20.95089561218456 29 19.278756624385586 29.381390059729213 27.867761202970865 23.472092112914336 30 15.361928301189126 30.850794627908396 32.015081766060135 21.77219530484234 31 22.473657328099314 27.187424308232117 31.2478857949695 19.091032568699077 32 17.60675647970221 33.76158662007144 31.39657084073326 17.23508605949309 33 14.970666914551895 34.66483851310176 35.62270835269937 14.741786219646972 34 17.877453005577358 33.38432142119397 34.39945259243958 14.338772980789095 35 15.568751878487792 35.20572733497969 33.3044136587623 15.92110712777022 36 14.225002311098073 32.747046055149255 35.5636936046881 17.464258029064574 37 15.541589095143785 32.67919344551832 28.68200280419441 23.097214655143475 38 18.334838796641602 36.795382488388825 28.28360139876392 16.586177316205656 39 22.38478846792431 28.603063562650377 30.29659058456196 18.71555738486335 40 24.12859273458899 29.058029093042375 32.35439019049704 14.458987981871587 41 22.71468601818026 26.125369631881245 35.31754515886812 15.842399191070374 42 18.925924051521932 34.91332966332683 32.55464470997481 13.606101575176435 43 14.31936980808975 35.96553650901196 34.18380046539346 15.531293217504826 44 13.945707334782389 34.98090042970806 31.78311026832353 19.290281967186022 45 14.729432372681881 35.39742484748989 31.502988232462954 18.370154547365278 46 17.4817461141261 28.64348285020375 32.01328006023434 21.861490975435814 47 22.888366962470876 29.40711086873895 30.354686183134206 17.349835985655975 48 15.554739613915006 31.44380873295108 30.215248503289327 22.78620314984458 49 20.53312993718922 29.508828263663784 30.440532706482117 19.51750909266488 50 16.375460383758135 36.901552755899004 28.011885802105734 18.711101058237126 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 128.0 1 85.5 2 43.0 3 129.0 4 215.0 5 254.0 6 293.0 7 296.5 8 300.0 9 442.5 10 585.0 11 844.5 12 1104.0 13 1948.0 14 2792.0 15 3830.5 16 4869.0 17 5524.5 18 6180.0 19 6569.0 20 6958.0 21 8303.5 22 9649.0 23 12033.0 24 14417.0 25 20196.0 26 25975.0 27 42856.5 28 59738.0 29 81950.0 30 104162.0 31 132598.5 32 161035.0 33 206910.5 34 252786.0 35 296885.5 36 340985.0 37 323814.5 38 306644.0 39 259855.5 40 213067.0 41 171870.5 42 130674.0 43 103741.0 44 76808.0 45 64809.0 46 52810.0 47 46734.0 48 40658.0 49 36292.5 50 31927.0 51 28768.5 52 25610.0 53 22405.0 54 19200.0 55 16691.5 56 14183.0 57 12241.5 58 10300.0 59 8827.0 60 7354.0 61 6178.5 62 5003.0 63 4133.5 64 3264.0 65 2802.0 66 2340.0 67 2028.0 68 1716.0 69 1374.0 70 1032.0 71 835.0 72 638.0 73 518.0 74 398.0 75 321.0 76 244.0 77 200.0 78 156.0 79 120.0 80 84.0 81 65.5 82 47.0 83 36.0 84 25.0 85 20.0 86 15.0 87 11.5 88 8.0 89 9.5 90 11.0 91 9.5 92 8.0 93 6.0 94 4.0 95 6.5 96 9.0 97 6.0 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009450263213068837 2 3.098446955104537E-4 3 5.16407825850756E-4 4 0.0 5 0.0 6 2.065631303403024E-4 7 1.032815651701512E-4 8 0.0 9 0.0023238352163284025 10 6.713301736059828E-4 11 0.0 12 2.58203912925378E-4 13 6.713301736059828E-4 14 4.131262606806048E-4 15 0.004286184954561276 16 7.229709561910585E-4 17 0.0 18 3.6148547809552924E-4 19 1.032815651701512E-4 20 6.713301736059828E-4 21 0.0 22 2.065631303403024E-4 23 5.680486084358317E-4 24 3.6148547809552924E-4 25 0.0016525050427224192 26 0.005164078258507561 27 0.006145253127623997 28 0.0035632139983702168 29 0.0024787575640836295 30 0.0039246994764657464 31 0.007591195040006114 32 0.003150087737689612 33 0.003821417911295595 34 0.002788602259594083 35 0.002891883824764234 36 0.007487913474835963 37 0.0035632139983702168 38 0.00893385538721808 39 0.004182903389391124 40 0.0023754759989134777 41 0.0035115732157851415 42 0.0018590681730627219 43 0.001445941912382117 44 0.0011877379994567388 45 0.0012910195646268902 46 8.778933039462854E-4 47 0.0019623497382328732 48 0.0021172720859881 49 1.5492234775522684E-4 50 0.0013426603472119656 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1936454.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.65632973346691 #Duplication Level Percentage of deduplicated Percentage of total 1 77.12813579048887 38.299001425401265 2 12.925408817011567 12.836567243147734 3 4.2409459438875485 6.317694305144676 4 1.8570943426572895 3.688659561005854 5 0.9928766331833295 2.4651304741002944 6 0.5810833409738377 1.731267958921288 7 0.4168899777946754 1.449085833996507 8 0.28280603227614354 1.1234487671454136 9 0.2051135351709219 0.9166666801719924 >10 1.1770433447262707 10.885280725422065 >50 0.10667998334747465 3.652394566210267 >100 0.07275278196753408 6.972255600685657 >500 0.007629934806066544 2.553510723545876 >1k 0.004912423779248323 4.67645386655239 >5k 5.225982743881195E-4 1.8862243948338977 >10k+ 1.045196548776239E-4 0.5463578737147853 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 10527 0.5436225182730908 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 9084 0.4691048690028268 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 8789 0.4538708381402295 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 7454 0.3849303933891536 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 5689 0.29378441212649514 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 5327 0.2750904488306978 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTG 4367 0.2255152975490252 No Hit TTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCCATATTTCACGTCCT 3684 0.19024464304341854 No Hit GTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGATTTCGTCA 3501 0.1807943798303497 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCAGTGATTTCGTCA 3279 0.16933012609646292 No Hit GTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGATAAAAACCAC 3259 0.1682973104447614 No Hit CTGTAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 3075 0.1587954064491075 No Hit GAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAAACATCCACTTG 2738 0.141392462717937 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGA 2657 0.13720955932854587 No Hit GGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGAAATACACACTT 2653 0.13700299619820558 No Hit GTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGATAAAAACCAC 2335 0.12058122733615154 No Hit CTGTAGGACATGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 2316 0.1196000524670351 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGA 2216 0.11443597420852755 No Hit GTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAA 2214 0.11433269264335741 No Hit GCCATATTCCACGTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTC 2154 0.11123424568825287 No Hit CCATATTTCACGTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAG 2145 0.11076947864498718 No Hit CCATATTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAG 2075 0.10715462386403189 No Hit ATTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGAT 2062 0.10648329369042589 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 5.164078258507561E-5 0.0 5 0.0 0.0 0.0 5.164078258507561E-5 0.0 6 0.0 0.0 0.0 5.164078258507561E-5 0.0 7 0.0 0.0 0.0 5.164078258507561E-5 0.0 8 0.0 0.0 0.0 5.164078258507561E-5 0.0 9 0.0 0.0 0.0 1.0328156517015121E-4 0.0 10 0.0 0.0 0.0 1.0328156517015121E-4 0.0 11 0.0 0.0 0.0 1.5492234775522681E-4 0.0 12 0.0 0.0 0.0 2.0656313034030243E-4 0.0 13 0.0 0.0 0.0 2.0656313034030243E-4 0.0 14 0.0 0.0 0.0 3.0984469551045363E-4 0.0 15 0.0 0.0 0.0 3.6148547809552924E-4 0.0 16 0.0 0.0 0.0 4.1312626068060486E-4 0.0 17 0.0 0.0 0.0 4.1312626068060486E-4 0.0 18 0.0 0.0 0.0 4.6476704326568047E-4 0.0 19 0.0 0.0 0.0 5.16407825850756E-4 0.0 20 0.0 0.0 0.0 8.262525213612097E-4 0.0 21 0.0 0.0 0.0 9.295340865313609E-4 0.0 22 0.0 0.0 0.0 0.001187737999456739 0.0 23 0.0 0.0 0.0 0.0017557866078925705 0.0 24 0.0 0.0 0.0 0.0029435246073493096 0.0 25 0.0 0.0 0.0 0.00340829165061499 0.0 26 0.0 0.0 0.0 0.004441107302316502 0.0 27 0.0 0.0 0.0 0.004905874345582183 0.0 28 0.0 0.0 0.0 0.0065583793883046025 0.0 29 0.0 0.0 0.0 0.010431438082185272 0.0 30 0.0 0.0 0.0 0.020036623643009337 0.0 31 0.0 0.0 0.0 0.04151918919840079 0.0 32 0.0 0.0 0.0 0.07276186266237153 0.0 33 0.0 0.0 0.0 0.09775600143354812 0.0 34 0.0 0.0 0.0 0.12419608211710684 0.0 35 0.0 0.0 0.0 0.15234030862597303 0.0 36 0.0 0.0 0.0 0.1924651966945768 0.0 37 0.0 0.0 0.0 0.26956488509409465 0.0 38 0.0 0.0 0.0 0.35895507974886054 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGGCGG 35 7.2892362E-6 37.716965 36 AATCGCC 25 0.0023538119 35.197956 11 CACCGCC 30 0.005744587 29.33466 32 TAGGACC 4500 0.0 28.892403 4 TCTCGCG 40 7.036061E-4 27.498402 43 TGTGGCG 130 0.0 25.383139 16 TTCGTAA 115 1.2732926E-11 24.86812 44 TATAGGA 935 0.0 24.468534 2 ATACCGG 45 0.0013987802 24.443655 6 CTCGCGA 45 0.0013989906 24.443026 44 GAATTCG 45 0.0013989906 24.443026 41 ATAGGAC 935 0.0 23.528652 3 AGGACCT 8905 0.0 23.419794 5 GGACCTG 8750 0.0 22.879263 6 GGACCTA 395 0.0 22.834705 6 TTTCGTA 135 5.456968E-12 22.81349 43 GGCGGAA 50 0.002579929 22.001562 38 GGGCGTC 60 2.8742696E-4 21.99929 7 ACTGTTC 2890 0.0 21.923168 8 CTAGGAC 590 0.0 21.626423 3 >>END_MODULE