##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064152_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1610988 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.29315860825779 32.0 32.0 32.0 32.0 32.0 2 31.369483819867064 32.0 32.0 32.0 32.0 32.0 3 31.46130014624566 32.0 32.0 32.0 32.0 32.0 4 31.546320642984305 32.0 32.0 32.0 32.0 32.0 5 31.48245176252089 32.0 32.0 32.0 32.0 32.0 6 35.070790098995154 36.0 36.0 36.0 36.0 36.0 7 35.093497903150116 36.0 36.0 36.0 36.0 36.0 8 35.039176579837964 36.0 36.0 36.0 36.0 36.0 9 35.15365601730118 36.0 36.0 36.0 36.0 36.0 10 35.00099007565544 36.0 36.0 36.0 36.0 36.0 11 35.1546057450459 36.0 36.0 36.0 36.0 36.0 12 35.058390875661395 36.0 36.0 36.0 36.0 36.0 13 35.10463827166931 36.0 36.0 36.0 36.0 36.0 14 35.04982408310925 36.0 36.0 36.0 36.0 36.0 15 35.01266489880744 36.0 36.0 36.0 36.0 36.0 16 35.0288549635379 36.0 36.0 36.0 36.0 36.0 17 34.98850208691809 36.0 36.0 36.0 36.0 36.0 18 34.98581181237849 36.0 36.0 36.0 36.0 36.0 19 34.98491360581208 36.0 36.0 36.0 36.0 36.0 20 34.97661745463033 36.0 36.0 36.0 36.0 36.0 21 34.98099427183815 36.0 36.0 36.0 36.0 36.0 22 34.95857076526951 36.0 36.0 36.0 36.0 36.0 23 34.9097783472006 36.0 36.0 36.0 32.0 36.0 24 34.87750436378173 36.0 36.0 36.0 32.0 36.0 25 34.847450756926804 36.0 36.0 36.0 32.0 36.0 26 34.7904521945539 36.0 36.0 36.0 32.0 36.0 27 34.78760425279394 36.0 36.0 36.0 32.0 36.0 28 34.76412363096435 36.0 36.0 36.0 32.0 36.0 29 34.733960153644844 36.0 36.0 36.0 32.0 36.0 30 34.71937593576116 36.0 36.0 36.0 32.0 36.0 31 34.71014185083936 36.0 36.0 36.0 32.0 36.0 32 34.67572073783293 36.0 36.0 36.0 32.0 36.0 33 34.648708742709445 36.0 36.0 36.0 32.0 36.0 34 34.636027084000624 36.0 36.0 36.0 32.0 36.0 35 34.602301196532814 36.0 36.0 36.0 32.0 36.0 36 34.57176527696048 36.0 36.0 36.0 32.0 36.0 37 34.563695074078765 36.0 36.0 36.0 32.0 36.0 38 34.52393313916677 36.0 36.0 36.0 32.0 36.0 39 34.53411943478164 36.0 36.0 36.0 32.0 36.0 40 34.50920428954157 36.0 36.0 36.0 32.0 36.0 41 34.49057845247761 36.0 36.0 36.0 32.0 36.0 42 34.42087091896401 36.0 36.0 36.0 32.0 36.0 43 34.41152882578889 36.0 36.0 36.0 32.0 36.0 44 34.3526860535274 36.0 36.0 36.0 32.0 36.0 45 34.313425053445464 36.0 36.0 36.0 32.0 36.0 46 34.29104375699881 36.0 36.0 36.0 32.0 36.0 47 34.26254944170906 36.0 36.0 36.0 32.0 36.0 48 34.217918445078425 36.0 36.0 36.0 32.0 36.0 49 34.19469480840329 36.0 36.0 36.0 32.0 36.0 50 33.584461833359406 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 4.0 18 4.0 19 2.0 20 9.0 21 64.0 22 149.0 23 490.0 24 1348.0 25 2923.0 26 6061.0 27 10993.0 28 18468.0 29 28064.0 30 41159.0 31 58254.0 32 84226.0 33 138407.0 34 288278.0 35 932085.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.129367162944945 17.803752909165745 11.734188695830852 26.332691232058465 2 16.112935053777857 20.270096630682335 36.788189045294814 26.82877927024499 3 17.96561478302378 24.20590409706372 28.846859339918545 28.981621779993954 4 12.021194447134304 15.811849622715998 36.1165322150134 36.050423715136304 5 14.184773567525022 37.11275316762136 33.31291108313656 15.389562181717059 6 34.50890665163654 35.83666410715915 16.593181695445093 13.061247545759214 7 30.567801334089808 30.572208572886417 20.481121499504027 18.378868593519744 8 28.565593639178964 32.64526653536 19.05092964747698 19.738210177984055 9 27.704019685010046 13.57776547326707 18.165182262633987 40.5530325790889 10 15.629713774930632 26.804658063154495 31.639633264430746 25.925994897484124 11 37.76123720350493 20.774580567949606 22.21711148686396 19.2470707416815 12 24.72492001792691 23.63198687015281 28.73693501991948 22.9061580920008 13 29.70504271005395 19.244136639894126 25.190831165396943 25.85998948465498 14 23.810525858403402 19.232270939828737 25.20892497447214 31.748278227295724 15 25.36665611362522 26.980402381262763 22.139411885207743 25.51352961990428 16 25.849096542036293 25.68131016147344 23.366503680685696 25.10308961580457 17 24.164798248031644 25.791067345008155 24.930601593556254 25.11353281340395 18 25.04162057676622 24.764274212871403 25.878501435770236 24.31560377459214 19 25.669216654624368 24.81936550737808 25.302857625258536 24.208560212739012 20 26.08572313571206 23.902637964415383 24.801719701771038 25.209919198101527 21 27.151412673464982 24.026622172232194 24.244873332389812 24.577091821913015 22 26.197620587640113 23.9844418263101 24.843915465435455 24.974022120614332 23 24.595028107184714 23.884651292135946 25.40106122003059 26.119259380648753 24 24.908549511136382 24.74268784051457 25.117676744790906 25.231085903558142 25 25.15538880877788 24.17926216620038 25.268613291834242 25.396735733187498 26 24.96857348775623 25.01413805069337 25.424529502433728 24.59275895911667 27 25.548733929691043 24.52979408898187 24.674248396848945 25.247223584478146 28 24.832456403902356 24.377686346469478 25.613809217567063 25.176048032061104 29 24.771128552876938 24.56336269078828 25.43775466371354 25.22775409262124 30 24.658845497033695 24.77834191121013 25.674161523147852 24.888651068608322 31 25.259579582264035 24.600496376501205 24.659222260710646 25.48070178052411 32 25.126417031567943 24.671899228896457 24.53794000762289 25.663743731912714 33 24.584676773558364 24.29372393560426 25.162237090248148 25.959362200589233 34 25.463313860339465 24.42169181023111 25.239346497002696 24.875647832426726 35 25.987435906985983 24.101145914807503 25.27257377680112 24.63884440140539 36 24.867476880232868 24.883617417129205 24.82842919674135 25.420476505896573 37 25.8026309173448 24.73709139057719 24.70617739789847 24.75410029417954 38 24.93650934558843 24.427218386123744 25.259751425784998 25.376520842502824 39 25.591913684052397 24.497507323459466 24.588387125609668 25.32219186687847 40 25.70036487877309 24.6223647471734 24.950991529200856 24.72627884485265 41 24.65242105642148 25.135682578189357 25.355369479350117 24.85652688603905 42 25.99335548997675 24.97042125349327 24.822993083601393 24.213230172928586 43 25.14880887719675 24.18435230195182 25.102314832345208 25.564523988506227 44 24.949859308105008 24.788713859439703 24.74240626902972 25.51902056342557 45 24.991619924467585 24.919054677820238 24.812286308073926 25.277039089638254 46 24.892875166592074 24.74085504953224 24.809881742129434 25.556388041746253 47 25.047642577007164 24.605109767255925 25.27576827147144 25.071479384265473 48 25.752878736149476 25.084515348086533 24.321983922530187 24.840621993233807 49 24.787225655952064 25.286797655338773 24.564131500162322 25.361845188546837 50 25.072844492062522 25.315183560671052 24.47084544304473 25.14112650422169 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 20.0 1 24.0 2 28.0 3 75.0 4 122.0 5 157.5 6 193.0 7 203.0 8 213.0 9 286.0 10 359.0 11 563.0 12 767.0 13 1413.0 14 2059.0 15 2840.5 16 3622.0 17 4009.5 18 4397.0 19 4469.5 20 4542.0 21 5114.5 22 5687.0 23 6402.0 24 7117.0 25 7858.0 26 8599.0 27 10478.5 28 12358.0 29 14893.0 30 17428.0 31 20212.0 32 22996.0 33 26333.0 34 29670.0 35 34398.0 36 39126.0 37 47687.5 38 56249.0 39 61940.5 40 67632.0 41 74829.0 42 82026.0 43 85640.5 44 89255.0 45 98173.5 46 107092.0 47 114608.5 48 122125.0 49 126116.5 50 130108.0 51 125817.0 52 121526.0 53 119469.0 54 117412.0 55 118230.0 56 119048.0 57 115313.0 58 111578.0 59 101397.0 60 91216.0 61 79841.0 62 68466.0 63 59728.5 64 50991.0 65 43761.5 66 36532.0 67 31296.5 68 26061.0 69 23569.0 70 21077.0 71 16298.0 72 11519.0 73 9871.0 74 8223.0 75 6390.5 76 4558.0 77 4025.0 78 3492.0 79 2867.0 80 2242.0 81 1851.0 82 1460.0 83 1181.5 84 903.0 85 664.0 86 425.0 87 300.5 88 176.0 89 132.5 90 89.0 91 76.0 92 63.0 93 51.0 94 39.0 95 48.0 96 57.0 97 36.5 98 16.0 99 22.5 100 29.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008131655853426593 2 5.586633792430484E-4 3 3.1036854402391575E-4 4 0.0 5 0.0 6 6.207370880478315E-5 7 1.241474176095663E-4 8 6.207370880478315E-5 9 9.931793408765304E-4 10 0.0011173267584860967 11 0.0 12 1.241474176095663E-4 13 5.586633792430484E-4 14 1.8622112641434945E-4 15 0.004841749286773086 16 6.828107968526147E-4 17 0.0 18 3.724422528286989E-4 19 0.0 20 6.828107968526147E-4 21 0.0 22 1.241474176095663E-4 23 7.448845056573978E-4 24 4.3451596163348206E-4 25 0.0018001375553387115 26 0.005400412666016134 27 0.006083223462868749 28 0.003972717363506122 29 0.002482948352191326 30 0.003786496237091772 31 0.0070764028037452785 32 0.0031036854402391578 33 0.004593454451553953 34 0.002420874643386543 35 0.0029795380226295912 36 0.008504098106255293 37 0.004158938489920471 38 0.007510918765378761 39 0.004283085907530037 40 0.002607095769800892 41 0.003662348819482206 42 0.0021105060993626273 43 0.0018001375553387115 44 0.001303547884900446 45 0.0014897690113147956 46 0.0010552530496813137 47 0.0021105060993626273 48 0.00235880093458176 49 5.586633792430484E-4 50 0.0013656215937052293 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1610988.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.93388986982472 #Duplication Level Percentage of deduplicated Percentage of total 1 77.64209097900012 43.42824166082303 2 13.410122816434878 15.00160665510584 3 4.086137627461848 6.856607161421937 4 1.742136328364743 3.897778461158973 5 0.8805696071676109 2.4626841715013987 6 0.47719597682193204 1.6014856328328824 7 0.31895230897087334 1.2488170326592192 8 0.2488897358938885 1.1137096861774813 9 0.17826789212143934 0.8974094980721744 >10 0.8753360142921789 8.553194412691177 >50 0.06770568240617295 2.62833242274726 >100 0.061761873813943206 7.256151119032937 >500 0.008264470479663924 3.157200526508818 >1k 0.002568686770706355 1.896781559267006 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1828 0.11347073969514361 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1753 0.10881521153478486 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1715 0.1064564106002031 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.8622112641434945E-4 2 0.0 0.0 0.0 0.0 1.8622112641434945E-4 3 0.0 0.0 0.0 0.0 1.8622112641434945E-4 4 0.0 0.0 0.0 0.0 1.8622112641434945E-4 5 0.0 0.0 0.0 6.207370880478315E-5 1.8622112641434945E-4 6 0.0 0.0 0.0 6.207370880478315E-5 1.8622112641434945E-4 7 0.0 0.0 0.0 6.207370880478315E-5 1.8622112641434945E-4 8 0.0 0.0 0.0 6.207370880478315E-5 1.8622112641434945E-4 9 0.0 0.0 0.0 1.241474176095663E-4 2.482948352191326E-4 10 0.0 0.0 0.0 1.241474176095663E-4 2.482948352191326E-4 11 0.0 0.0 0.0 1.241474176095663E-4 2.482948352191326E-4 12 0.0 0.0 0.0 1.241474176095663E-4 3.1036854402391575E-4 13 0.0 0.0 0.0 1.241474176095663E-4 4.965896704382652E-4 14 0.0 0.0 0.0 1.241474176095663E-4 5.586633792430484E-4 15 0.0 0.0 0.0 1.241474176095663E-4 7.448845056573978E-4 16 0.0 0.0 0.0 1.241474176095663E-4 8.06958214462181E-4 17 0.0 0.0 0.0 1.8622112641434945E-4 8.06958214462181E-4 18 0.0 0.0 0.0 3.1036854402391575E-4 8.06958214462181E-4 19 0.0 0.0 0.0 3.724422528286989E-4 8.06958214462181E-4 20 0.0 0.0 0.0 4.3451596163348206E-4 8.690319232669641E-4 21 0.0 0.0 0.0 4.965896704382652E-4 9.931793408765304E-4 22 0.0 0.0 0.0 5.586633792430484E-4 9.931793408765304E-4 23 0.0 0.0 0.0 9.311056320717473E-4 0.0010552530496813137 24 0.0 0.0 0.0 0.002048432390557844 0.0010552530496813137 25 0.0 0.0 0.0 0.00235880093458176 0.0010552530496813137 26 0.0 0.0 0.0 0.002793316896215242 0.0010552530496813137 27 0.0 0.0 0.0 0.003600275110677423 0.00117940046729088 28 0.0 0.0 0.0 0.005090044121992219 0.00117940046729088 29 0.0 0.0 0.0 0.00943520373832704 0.00117940046729088 30 0.0 0.0 0.0 0.018746260059044513 0.00117940046729088 31 0.0 0.0 0.0 0.037927036079722504 0.00117940046729088 32 0.0 0.0 0.0 0.05810099144127703 0.00117940046729088 33 0.0 0.0 0.0 0.07690932520912633 0.00117940046729088 34 0.0 0.0 0.0 0.09925586037884826 0.00117940046729088 35 0.0 0.0 0.0 0.12271972230705629 0.00117940046729088 36 0.0 0.0 0.0 0.16083297951319314 0.00117940046729088 37 0.0 0.0 0.0 0.2147750324645497 0.00117940046729088 38 0.0 0.0 0.0 0.2899462938271421 0.0014276953025100126 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3125 0.0 20.979021 1 ATACGAA 465 0.0 18.923983 40 AATACCG 95 1.5986185E-5 18.52501 5 ACCGTCG 420 0.0 18.33204 8 CGCAATA 490 0.0 17.960705 36 TACGAAT 495 0.0 17.776524 41 CGAATGC 495 0.0 17.332647 43 TAATACT 270 0.0 17.109903 4 CGTCGTA 440 0.0 16.999327 10 TAGCGGC 545 0.0 16.956615 30 AACGCAG 3850 0.0 16.798815 6 CAATACG 525 0.0 16.762283 38 ATACCGT 460 0.0 16.73795 6 TACCGTC 465 0.0 16.557972 7 TCGTTTA 505 0.0 16.556885 30 CGAGATA 80 0.0019876119 16.501398 35 TACGCTG 80 0.0019896748 16.498837 5 GGTATCA 1695 0.0 16.483637 1 ATCGTTT 515 0.0 16.234385 29 CGAGCCG 590 0.0 16.033264 15 >>END_MODULE