Basic Statistics
Measure | Value |
---|---|
Filename | SRR4064151_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1605802 |
Sequences flagged as poor quality | 0 |
Sequence length | 25 |
%GC | 50 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTT | 2972 | 0.185078857791932 | No Hit |
TATCAACGCAGAGTACTTTTTTTTT | 1885 | 0.11738682602213722 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCGATT | 55 | 1.9575158E-4 | 13.820426 | 12 |
AACCGCG | 155 | 0.0 | 13.48438 | 7 |
GTAATAC | 105 | 2.0037987E-8 | 12.662014 | 3 |
CTAAGAC | 100 | 1.4494435E-7 | 12.345464 | 3 |
AGAACCG | 220 | 0.0 | 12.089105 | 5 |
TCTAGAC | 165 | 0.0 | 12.086469 | 3 |
GTATCAA | 2170 | 0.0 | 11.992107 | 1 |
GAACCGC | 225 | 0.0 | 11.821196 | 6 |
GTATTAT | 115 | 7.100061E-8 | 11.562051 | 1 |
TCGCGTA | 125 | 1.830449E-8 | 11.40043 | 9 |
ACGGTAT | 160 | 4.5474735E-11 | 11.281675 | 9 |
GCGTCCC | 110 | 4.9575465E-7 | 11.229095 | 16 |
ACCGTCG | 205 | 0.0 | 11.122718 | 8 |
GCGTAAC | 130 | 3.2619937E-8 | 10.962294 | 11 |
CGCGGTC | 165 | 8.0035534E-11 | 10.939807 | 10 |
CGTCGTA | 200 | 0.0 | 10.925411 | 10 |
CGATTCT | 70 | 0.0014902032 | 10.85823 | 14 |
ACGGTGC | 70 | 0.0014905907 | 10.857891 | 8 |
CTAGGAC | 175 | 2.0008883E-11 | 10.853155 | 3 |
CCGCGCG | 80 | 3.7695025E-4 | 10.687903 | 9 |