##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064148_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1260650 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.300659976995995 32.0 32.0 32.0 32.0 32.0 2 31.41026137310118 32.0 32.0 32.0 32.0 32.0 3 31.48435727600841 32.0 32.0 32.0 32.0 32.0 4 31.572704557172887 32.0 32.0 32.0 32.0 32.0 5 31.5122309919486 32.0 32.0 32.0 32.0 32.0 6 35.104296196406615 36.0 36.0 36.0 36.0 36.0 7 35.1312021576171 36.0 36.0 36.0 36.0 36.0 8 35.07659461388966 36.0 36.0 36.0 36.0 36.0 9 35.19116646174592 36.0 36.0 36.0 36.0 36.0 10 35.042582001348514 36.0 36.0 36.0 36.0 36.0 11 35.18639273390711 36.0 36.0 36.0 36.0 36.0 12 35.09115852933011 36.0 36.0 36.0 36.0 36.0 13 35.13846428429778 36.0 36.0 36.0 36.0 36.0 14 35.0766493475588 36.0 36.0 36.0 36.0 36.0 15 35.05777733708801 36.0 36.0 36.0 36.0 36.0 16 35.0631031610677 36.0 36.0 36.0 36.0 36.0 17 35.02788482132233 36.0 36.0 36.0 36.0 36.0 18 35.02614048308412 36.0 36.0 36.0 36.0 36.0 19 35.020949510173324 36.0 36.0 36.0 36.0 36.0 20 35.01694205370246 36.0 36.0 36.0 36.0 36.0 21 35.01907349383254 36.0 36.0 36.0 36.0 36.0 22 34.999366993217784 36.0 36.0 36.0 36.0 36.0 23 34.94701146234085 36.0 36.0 36.0 36.0 36.0 24 34.922175861658665 36.0 36.0 36.0 32.0 36.0 25 34.89274580573514 36.0 36.0 36.0 32.0 36.0 26 34.835870384325546 36.0 36.0 36.0 32.0 36.0 27 34.83140443422044 36.0 36.0 36.0 32.0 36.0 28 34.806772696624755 36.0 36.0 36.0 32.0 36.0 29 34.78254154602784 36.0 36.0 36.0 32.0 36.0 30 34.76792448340142 36.0 36.0 36.0 32.0 36.0 31 34.748414706698924 36.0 36.0 36.0 32.0 36.0 32 34.714738428588426 36.0 36.0 36.0 32.0 36.0 33 34.68486336413755 36.0 36.0 36.0 32.0 36.0 34 34.670145559830246 36.0 36.0 36.0 32.0 36.0 35 34.63122754134772 36.0 36.0 36.0 32.0 36.0 36 34.605245706579936 36.0 36.0 36.0 32.0 36.0 37 34.59490262959584 36.0 36.0 36.0 32.0 36.0 38 34.55464165311545 36.0 36.0 36.0 32.0 36.0 39 34.556096458176334 36.0 36.0 36.0 32.0 36.0 40 34.535593543013526 36.0 36.0 36.0 32.0 36.0 41 34.51214135564987 36.0 36.0 36.0 32.0 36.0 42 34.432691072066 36.0 36.0 36.0 32.0 36.0 43 34.42475786300718 36.0 36.0 36.0 32.0 36.0 44 34.3633768294134 36.0 36.0 36.0 32.0 36.0 45 34.3142014040376 36.0 36.0 36.0 32.0 36.0 46 34.30218220759132 36.0 36.0 36.0 32.0 36.0 47 34.25300916194027 36.0 36.0 36.0 32.0 36.0 48 34.213638995756156 36.0 36.0 36.0 32.0 36.0 49 34.185406734621026 36.0 36.0 36.0 32.0 36.0 50 33.58297782889779 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 2.0 19 4.0 20 12.0 21 44.0 22 122.0 23 373.0 24 981.0 25 2275.0 26 4569.0 27 8462.0 28 14109.0 29 21756.0 30 31190.0 31 44303.0 32 64537.0 33 104269.0 34 219400.0 35 744240.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.34451348909235 17.715624372787154 11.76006733638124 26.17979480173926 2 16.22969493418454 20.22582073000668 36.64835330457559 26.896131031233196 3 18.010117027209045 24.369311948547058 28.778079827263305 28.842491196980596 4 12.016420100741682 15.907190734938325 35.77440209415778 36.30198707016222 5 14.192757704358863 37.06984492127077 33.344147860230834 15.393249514139532 6 34.53202998143017 35.723243699465435 16.612263385388616 13.132462933715782 7 30.411851029230952 30.67703169000119 20.599690635783126 18.311426644984728 8 28.698528536865904 32.58271526593424 18.991234680521956 19.727521516677903 9 27.704767835257627 13.597195064392151 18.129196793679377 40.56884030667084 10 15.690158341338584 26.84719001833209 31.643994158480954 25.81865748184838 11 37.706421290604055 20.787926863126167 22.202435251655892 19.30321659461389 12 24.732181598525838 23.62529141735725 28.80674953932459 22.835777444792324 13 29.841176414594443 19.28403260555716 25.163884490784078 25.710906489064318 14 23.853129501653118 19.259539538396126 25.359894276594257 31.5274366833565 15 25.283237691198334 26.929276647189198 22.36867782218337 25.418807839429096 16 25.90366797816982 25.50926513516944 23.581117527605024 25.00594935905572 17 24.248046642605008 25.68484511958117 25.027485820806728 25.039622417007102 18 25.051124419942095 24.76873041684845 26.115416650140798 24.064728513068655 19 25.767838629150543 24.70394217581579 25.457680924666583 24.070538270367088 20 26.011705128489883 23.904369512725243 24.956768128036146 25.127157230748733 21 27.232935390473166 23.817395787887204 24.558759370166182 24.390909451473448 22 26.148336175782333 23.82469361043906 24.986554555189784 25.04041565858882 23 24.599409823581674 23.870890976012184 25.684810889706817 25.844888310699325 24 25.0890217483562 24.5661949776583 25.313271677162604 25.031511596822902 25 25.118057456082944 24.131634162690432 25.402601111362312 25.347707269864312 26 25.10320711549995 24.984610161101468 25.444401430461728 24.46778129293686 27 25.59976835875834 24.51898744218885 24.728099193222114 25.153145005830694 28 24.880154658598443 24.359681195129554 25.655668845288254 25.104495300983753 29 24.85877767826616 24.649591742351465 25.442705503168728 25.048925076213646 30 24.725147887452433 24.797891775815554 25.654714827298715 24.822245509433305 31 25.209773372565603 24.67388639830801 24.747030408710007 25.36930982041638 32 25.058663193149854 24.66083234305315 24.655279370070744 25.62522509372625 33 24.72760533056635 24.267419971298903 25.11925075699341 25.885723941141332 34 25.492127936208004 24.402882126484513 25.254938731410594 24.85005120589689 35 25.817362877783673 24.343075450040416 25.316176546415264 24.523385125760644 36 24.96711731937532 24.942048737765184 24.90436653439552 25.18646740846398 37 25.73061374727904 24.83269659142112 24.834600470892855 24.602089190406986 38 24.991888300509707 24.640050772495588 25.193074314273815 25.17498661272089 39 25.429741635417898 24.588860868344252 24.664143495509617 25.317254000728234 40 25.689408849214946 24.82331952254823 25.06843914330296 24.41883248493387 41 24.798131681843312 25.161054387636355 25.244982742331224 24.79583118818911 42 25.767443483889597 25.212475825272445 24.906275830666644 24.113804860171314 43 25.30790453571185 24.32322876557371 24.96696064945923 25.401906049255206 44 24.8937034357588 24.927099595121145 24.73402061201437 25.445176357105687 45 25.007496275659868 25.100624610312654 24.779038350787623 25.112840763239852 46 24.89824540250081 24.988596980401084 24.722777720046548 25.390379897051556 47 25.045255868190797 24.722872260254956 25.19637318441072 25.035498687143527 48 25.91213198605763 25.313219389220208 24.175682086087935 24.598966538634226 49 24.910541400036013 25.54569547665906 24.313939200675215 25.229823922629713 50 25.13094611992547 25.56303063619626 24.31603805389832 24.989985189979954 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 23.0 1 29.5 2 36.0 3 90.0 4 144.0 5 177.0 6 210.0 7 204.5 8 199.0 9 303.0 10 407.0 11 580.5 12 754.0 13 1439.0 14 2124.0 15 2956.0 16 3788.0 17 4131.0 18 4474.0 19 4554.5 20 4635.0 21 5064.5 22 5494.0 23 6156.0 24 6818.0 25 7184.5 26 7551.0 27 8801.0 28 10051.0 29 11809.0 30 13567.0 31 15697.0 32 17827.0 33 20558.5 34 23290.0 35 26647.0 36 30004.0 37 35912.5 38 41821.0 39 46290.0 40 50759.0 41 56158.0 42 61557.0 43 63952.0 44 66347.0 45 74089.0 46 81831.0 47 87575.0 48 93319.0 49 96934.5 50 100550.0 51 97849.5 52 95149.0 53 94512.0 54 93875.0 55 94614.5 56 95354.0 57 93244.5 58 91135.0 59 82676.0 60 74217.0 61 64932.5 62 55648.0 63 47920.5 64 40193.0 65 34319.0 66 28445.0 67 23981.5 68 19518.0 69 17390.5 70 15263.0 71 11772.0 72 8281.0 73 7155.0 74 6029.0 75 4748.5 76 3468.0 77 2995.5 78 2523.0 79 2099.5 80 1676.0 81 1339.0 82 1002.0 83 836.0 84 670.0 85 490.0 86 310.0 87 218.5 88 127.0 89 89.0 90 51.0 91 45.5 92 40.0 93 37.5 94 35.0 95 34.0 96 33.0 97 24.5 98 16.0 99 14.0 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008963629873477968 2 3.172966326894856E-4 3 2.379724745171142E-4 4 0.0 5 0.0 6 2.379724745171142E-4 7 0.0 8 0.0 9 0.0011898623725855708 10 0.0015071590052750565 11 0.0 12 7.93241581723714E-5 13 4.759449490342284E-4 14 1.586483163447428E-4 15 0.003807559592273827 16 7.93241581723714E-4 17 0.0 18 0.0 19 7.93241581723714E-5 20 4.759449490342284E-4 21 0.0 22 0.0 23 7.93241581723714E-4 24 2.379724745171142E-4 25 0.0027763455360329987 26 0.006187284337444968 27 0.006345932653789712 28 0.005314718597548884 29 0.003886883750446198 30 0.004997421964859397 31 0.00975687145520168 32 0.00507674612303177 33 0.005632015230238369 34 0.004204180383135684 35 0.0032522904850672274 36 0.00856700908261611 37 0.005235394439376512 38 0.009915519771546425 39 0.005314718597548884 40 0.0032522904850672274 41 0.004045532066790941 42 0.00285566969420537 43 0.002538373061515885 44 0.002062428112481656 45 0.0019037797961369135 46 0.0015071590052750565 47 0.003172966326894856 48 0.002538373061515885 49 8.725657398960854E-4 50 0.0013485106889303137 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1260650.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.03340361642033 #Duplication Level Percentage of deduplicated Percentage of total 1 74.5787156123891 40.29741841878449 2 14.73032658443157 15.918593634765546 3 4.969711704079445 8.055913150913181 4 2.125012901287471 4.592867191414651 5 1.0477497474147388 2.830674249553152 6 0.6388616852425604 2.0711922776266647 7 0.3908677366285839 1.4783939921722267 8 0.2557932982576177 1.1057106021703396 9 0.18164874604996523 0.8833590010560968 >10 0.9334886031412772 8.878127030495683 >50 0.07033103755751142 2.621542060331484 >100 0.0683234149845306 7.467391147043069 >500 0.007394297206175775 2.6952904002755833 >1k 0.0017746313294821861 1.103526843397741 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1390 0.11026057985959624 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1317 0.10446991631301313 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.586483163447428E-4 2 0.0 0.0 0.0 0.0 1.586483163447428E-4 3 0.0 0.0 0.0 0.0 1.586483163447428E-4 4 0.0 0.0 0.0 0.0 1.586483163447428E-4 5 0.0 0.0 0.0 0.0 1.586483163447428E-4 6 0.0 0.0 0.0 0.0 3.172966326894856E-4 7 0.0 0.0 0.0 0.0 3.172966326894856E-4 8 0.0 0.0 0.0 0.0 3.172966326894856E-4 9 0.0 0.0 0.0 0.0 3.172966326894856E-4 10 0.0 0.0 0.0 0.0 3.172966326894856E-4 11 0.0 0.0 0.0 0.0 3.172966326894856E-4 12 0.0 0.0 0.0 0.0 7.93241581723714E-4 13 0.0 0.0 0.0 0.0 9.518898980684568E-4 14 0.0 0.0 0.0 0.0 9.518898980684568E-4 15 0.0 0.0 0.0 0.0 0.0012691865307579424 16 0.0 0.0 0.0 0.0 0.0012691865307579424 17 0.0 0.0 0.0 7.93241581723714E-5 0.0012691865307579424 18 0.0 0.0 0.0 7.93241581723714E-5 0.001427834847102685 19 0.0 0.0 0.0 7.93241581723714E-5 0.001427834847102685 20 0.0 0.0 0.0 1.586483163447428E-4 0.001586483163447428 21 0.0 0.0 0.0 2.379724745171142E-4 0.001824455637964542 22 0.0 0.0 0.0 5.552691072065998E-4 0.0019037797961369135 23 0.0 0.0 0.0 9.518898980684568E-4 0.0019037797961369135 24 0.0 0.0 0.0 0.0017451314797921706 0.0019037797961369135 25 0.0 0.0 0.0 0.0021417522706540276 0.0019037797961369135 26 0.0 0.0 0.0 0.0024590489033435134 0.002062428112481656 27 0.0 0.0 0.0 0.0029349938523777416 0.0021417522706540276 28 0.0 0.0 0.0 0.004362828699480427 0.0021417522706540276 29 0.0 0.0 0.0 0.007615119184547654 0.0021417522706540276 30 0.0 0.0 0.0 0.014040375996509737 0.0021417522706540276 31 0.0 0.0 0.0 0.029270614365605047 0.0021417522706540276 32 0.0 0.0 0.0 0.04577003926545829 0.0021417522706540276 33 0.0 0.0 0.0 0.05901717368024432 0.002221076428826399 34 0.0 0.0 0.0 0.07734105421806212 0.002221076428826399 35 0.0 0.0 0.0 0.09947249434815374 0.002221076428826399 36 0.0 0.0 0.0 0.12969499861182723 0.002221076428826399 37 0.0 0.0 0.0 0.17237139570856305 0.002221076428826399 38 0.0 0.0 0.0 0.23289572839408243 0.0023004005869987705 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACGGA 70 8.1331935E-4 18.853828 1 TCCTATA 155 7.239578E-10 18.44837 2 ATCGATT 60 0.007406224 18.33593 29 CGTGCGG 60 0.007413006 18.333017 10 GTATTAG 370 0.0 17.834703 1 GTATCAA 2855 0.0 17.720177 1 GATCTAA 100 2.4869041E-5 17.596907 1 ATAGTAC 100 2.4869041E-5 17.596907 3 TTAACGG 115 4.270645E-6 17.218462 35 GTCCTAT 370 0.0 16.645723 1 CGAGCCG 510 0.0 16.391878 15 TAACGGC 135 1.0848307E-6 16.29731 36 TATACTG 190 6.184564E-10 16.20832 5 TCCCCGC 275 0.0 15.997189 1 GTATTAC 110 5.6300094E-5 15.997188 1 AACGCAG 3190 0.0 15.790955 6 TAATACC 185 7.579729E-9 15.457356 4 CGAACGT 200 1.2787496E-9 15.397903 4 AACGTCT 230 3.6379788E-11 15.302265 6 GTATAAA 245 5.456968E-12 15.262623 1 >>END_MODULE