##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064147_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1230240 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.35358385355703 32.0 32.0 32.0 32.0 32.0 2 31.404254454415398 32.0 32.0 32.0 32.0 32.0 3 31.474814670308234 32.0 32.0 32.0 32.0 32.0 4 31.56083284562362 32.0 32.0 32.0 32.0 32.0 5 31.516262680452595 32.0 32.0 32.0 32.0 32.0 6 35.09269329561712 36.0 36.0 36.0 36.0 36.0 7 35.10957049031084 36.0 36.0 36.0 36.0 36.0 8 35.06450042268175 36.0 36.0 36.0 36.0 36.0 9 35.166480524125376 36.0 36.0 36.0 36.0 36.0 10 35.02436028742359 36.0 36.0 36.0 36.0 36.0 11 35.16640899336715 36.0 36.0 36.0 36.0 36.0 12 35.073256437768244 36.0 36.0 36.0 36.0 36.0 13 35.11508973858759 36.0 36.0 36.0 36.0 36.0 14 35.05695392768891 36.0 36.0 36.0 36.0 36.0 15 35.0226638704643 36.0 36.0 36.0 36.0 36.0 16 35.04280790740018 36.0 36.0 36.0 36.0 36.0 17 35.0030912667447 36.0 36.0 36.0 36.0 36.0 18 35.004173982312395 36.0 36.0 36.0 36.0 36.0 19 34.99302249967486 36.0 36.0 36.0 36.0 36.0 20 34.991908895825205 36.0 36.0 36.0 36.0 36.0 21 34.98405758226037 36.0 36.0 36.0 36.0 36.0 22 34.97123325529978 36.0 36.0 36.0 36.0 36.0 23 34.92329951879308 36.0 36.0 36.0 32.0 36.0 24 34.89401824034335 36.0 36.0 36.0 32.0 36.0 25 34.861750552737675 36.0 36.0 36.0 32.0 36.0 26 34.80605247756535 36.0 36.0 36.0 32.0 36.0 27 34.799509851736246 36.0 36.0 36.0 32.0 36.0 28 34.77136412407335 36.0 36.0 36.0 32.0 36.0 29 34.7446945311484 36.0 36.0 36.0 32.0 36.0 30 34.72318084276239 36.0 36.0 36.0 32.0 36.0 31 34.71808671478736 36.0 36.0 36.0 32.0 36.0 32 34.691423624658604 36.0 36.0 36.0 32.0 36.0 33 34.672573644166995 36.0 36.0 36.0 32.0 36.0 34 34.65810979971388 36.0 36.0 36.0 32.0 36.0 35 34.627637696709584 36.0 36.0 36.0 32.0 36.0 36 34.591295194433606 36.0 36.0 36.0 32.0 36.0 37 34.58883226037196 36.0 36.0 36.0 32.0 36.0 38 34.55016582130316 36.0 36.0 36.0 32.0 36.0 39 34.5369635193133 36.0 36.0 36.0 32.0 36.0 40 34.53016484588373 36.0 36.0 36.0 32.0 36.0 41 34.5083032579009 36.0 36.0 36.0 32.0 36.0 42 34.45298722200546 36.0 36.0 36.0 32.0 36.0 43 34.43970688646118 36.0 36.0 36.0 32.0 36.0 44 34.37459276238783 36.0 36.0 36.0 32.0 36.0 45 34.35691491091169 36.0 36.0 36.0 32.0 36.0 46 34.32091624398491 36.0 36.0 36.0 32.0 36.0 47 34.30269540902588 36.0 36.0 36.0 32.0 36.0 48 34.2613977760437 36.0 36.0 36.0 32.0 36.0 49 34.243069644947326 36.0 36.0 36.0 32.0 36.0 50 33.657529425152816 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 0.0 16 0.0 17 1.0 18 2.0 19 3.0 20 10.0 21 41.0 22 122.0 23 360.0 24 972.0 25 2356.0 26 4585.0 27 8555.0 28 14044.0 29 21214.0 30 31090.0 31 43874.0 32 63123.0 33 101588.0 34 212828.0 35 725471.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.330631741616195 18.193309861731073 11.925400300291269 26.550658096361467 2 15.823249885794086 20.44806110057111 37.4451527107851 26.283536302849704 3 18.031676874743443 24.638707238860867 29.05298581165387 28.276630074741817 4 12.285570295226949 16.21073936792821 36.337869033684484 35.165821303160364 5 14.070100143061518 37.16827610872675 33.64782481467031 15.113798933541423 6 33.92787905439512 36.04055797288169 16.821203034532314 13.210359938190871 7 29.92166562757318 30.597713127286646 21.0444474610218 18.43617378411837 8 27.79571465730264 33.58629210560541 19.324765899336715 19.293227337755233 9 27.66970403908212 13.910569568292107 18.301211968493696 40.11851442413207 10 15.794568996279567 26.809718159080436 31.873311803536403 25.5224010411036 11 37.2208674730134 20.805696449473274 22.962186240083234 19.011249837430093 12 24.94216566225397 23.42302871476901 29.10233629590372 22.532469327073297 13 29.75978553673529 19.537014909358707 25.18650923320279 25.516690320703216 14 23.530688420758295 19.75889178986796 25.082504495072488 31.627915294301257 15 24.941390500221104 27.880400853211246 21.963930364435658 25.214278282131986 16 25.510737414355518 25.69037847363625 24.11547099691034 24.683413115097895 17 23.938012095200936 26.171234880998828 25.183622707764336 24.707130316035897 18 24.772218686318165 24.85756809460291 26.42889134370044 23.941321875378485 19 25.8535732865132 24.697050981922228 25.211909871244636 24.237465860319936 20 26.09922356108441 24.392553599646245 24.883843047490227 24.62437979177911 21 26.72876837039927 24.123504356873458 24.27266224476525 24.875065027962023 22 26.04049310944097 24.535413587984074 24.735863258534554 24.688230044040402 23 24.439984588297836 24.37544402121873 25.558552275420777 25.626019115062665 24 25.28563625190614 24.684938499604954 25.15631147194522 24.873113776543686 25 24.938851853628126 24.592000221100644 25.390319856219552 25.078828069051685 26 24.589245766459435 25.34840543141794 25.671123481518094 24.39122532060453 27 25.16629828909686 24.94795430546535 24.815370896193937 25.070376509243854 28 24.50934328736746 24.87814870572628 25.405303904769028 25.207204102137233 29 24.845047158500194 24.73043286000067 25.181574247711573 25.242945733787565 30 24.563159041323495 25.12266338046945 25.460983453043255 24.853194125163792 31 25.44783229335007 24.50737634821176 24.71694462780088 25.327846730637287 32 24.937875803631453 25.008758759775873 24.568504068860516 25.484861367732158 33 24.481604046207533 24.691084052938205 25.41715134828876 25.410160552565504 34 25.29096847509596 24.643188679582703 25.43769234646017 24.628150498861164 35 25.58541056165436 24.70531334208526 25.287086298625027 24.422189797635355 36 24.599253907879003 25.090578900176645 25.15203516989488 25.158132022049468 37 25.477790883219136 24.848214873601133 24.647839810501278 25.02615443267845 38 24.879466408704594 24.985713182485135 25.12593941413887 25.0088809946714 39 25.627419325994676 24.586692548679157 24.6140865129028 25.171801612423366 40 25.88680269808471 24.65912213076509 25.15822553295952 24.295849638190678 41 24.905035534959037 24.90219046217801 25.507540662186624 24.68523334067633 42 25.75734175239631 25.306854686626174 24.923428578860435 24.012374982117077 43 24.8993878325729 24.551482297054427 25.380846824833625 25.16828304553905 44 24.683268548278278 25.062387113870503 24.873478120209196 25.380866217642016 45 24.787599656647895 25.211424911235675 24.939116778732977 25.06185865338345 46 24.763885806811892 24.66447358260359 25.11495808510759 25.45668252547692 47 25.358859453250933 24.5948479008175 25.155643272690913 24.890649373240656 48 25.543357215201812 25.29600348554976 24.352515237087292 24.808124062161138 49 24.99489934849846 25.22761911342142 24.59432547440123 25.18315606367889 50 24.92401808771877 25.701760731962477 24.444756943230804 24.929464237087952 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 15.0 1 21.5 2 28.0 3 66.5 4 105.0 5 127.0 6 149.0 7 149.0 8 149.0 9 178.5 10 208.0 11 353.0 12 498.0 13 901.5 14 1305.0 15 1833.0 16 2361.0 17 2460.5 18 2560.0 19 2545.5 20 2531.0 21 2884.0 22 3237.0 23 3780.0 24 4323.0 25 5479.0 26 6635.0 27 8727.5 28 10820.0 29 13055.5 30 15291.0 31 17819.0 32 20347.0 33 24315.5 34 28284.0 35 33542.0 36 38800.0 37 44027.0 38 49254.0 39 52569.5 40 55885.0 41 59746.5 42 63608.0 43 65587.5 44 67567.0 45 73594.5 46 79622.0 47 84685.0 48 89748.0 49 92562.0 50 95376.0 51 93328.0 52 91280.0 53 89992.5 54 88705.0 55 88247.5 56 87790.0 57 84927.5 58 82065.0 59 74929.5 60 67794.0 61 59608.0 62 51422.0 63 44690.5 64 37959.0 65 31905.0 66 25851.0 67 22460.0 68 19069.0 69 17153.5 70 15238.0 71 11887.0 72 8536.0 73 7273.5 74 6011.0 75 4727.5 76 3444.0 77 2986.0 78 2528.0 79 2083.0 80 1638.0 81 1305.0 82 972.0 83 789.5 84 607.0 85 467.0 86 327.0 87 219.0 88 111.0 89 86.5 90 62.0 91 50.5 92 39.0 93 34.0 94 29.0 95 27.0 96 25.0 97 19.5 98 14.0 99 16.0 100 18.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00820978020548836 2 4.877097151775264E-4 3 4.064247626479386E-4 4 0.0 5 0.0 6 8.128495252958772E-5 7 8.128495252958772E-5 8 0.0 9 8.128495252958773E-4 10 5.689946677071141E-4 11 0.0 12 1.6256990505917544E-4 13 4.877097151775264E-4 14 3.251398101183509E-4 15 0.005202236961893614 16 7.315645727662895E-4 17 0.0 18 2.438548575887632E-4 19 0.0 20 6.502796202367018E-4 21 0.0 22 4.877097151775264E-4 23 4.877097151775264E-4 24 3.251398101183509E-4 25 0.0025198335284172192 26 0.005202236961893614 27 0.005771231629600728 28 0.004226817531538562 29 0.0021946937182988685 30 0.0035765379113018602 31 0.00747821563272207 32 0.003495252958772272 33 0.004145532579008974 34 0.0030888281961243334 35 0.00284497333853557 36 0.00788464039537001 37 0.003820392768890623 38 0.006909220965014956 39 0.003413968006242684 40 0.0027636883860059826 41 0.003495252958772272 42 0.0013005592404734035 43 0.001706984003121342 44 0.001463129145532579 45 0.0013005592404734035 46 7.315645727662895E-4 47 0.0018695539081805175 48 0.001463129145532579 49 4.064247626479386E-4 50 0.0010567043828846405 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1230240.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.73784631685672 #Duplication Level Percentage of deduplicated Percentage of total 1 81.85839339154197 50.537609109518165 2 11.23582788416792 13.873516303108246 3 3.0286049691464605 5.609386444188982 4 1.2798516072983257 3.1606112735906438 5 0.6599059864320805 2.037058718695876 6 0.4373302100204072 1.619989517757514 7 0.28281563404765653 1.222229970558703 8 0.21413733676012048 1.057630239007785 9 0.1493283949748574 0.8297292149730563 >10 0.7351157725933813 8.007830745195832 >50 0.055337091698299125 2.3783562365857196 >100 0.05778526165821701 7.144642504283016 >500 0.005036320645157182 2.161056374554861 >1k 5.301390152797034E-4 0.36035334798150803 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.128495252958772E-5 2 0.0 0.0 0.0 0.0 8.128495252958772E-5 3 0.0 0.0 0.0 0.0 8.128495252958772E-5 4 0.0 8.128495252958772E-5 0.0 0.0 8.128495252958772E-5 5 0.0 8.128495252958772E-5 0.0 0.0 8.128495252958772E-5 6 0.0 8.128495252958772E-5 0.0 0.0 8.128495252958772E-5 7 0.0 8.128495252958772E-5 0.0 0.0 1.6256990505917544E-4 8 0.0 8.128495252958772E-5 0.0 0.0 1.6256990505917544E-4 9 0.0 8.128495252958772E-5 0.0 0.0 1.6256990505917544E-4 10 0.0 8.128495252958772E-5 0.0 0.0 2.4385485758876316E-4 11 0.0 8.128495252958772E-5 0.0 0.0 3.251398101183509E-4 12 0.0 8.128495252958772E-5 0.0 0.0 7.315645727662895E-4 13 0.0 8.128495252958772E-5 0.0 0.0 8.94134477825465E-4 14 0.0 8.128495252958772E-5 0.0 0.0 9.754194303550526E-4 15 0.0 8.128495252958772E-5 0.0 0.0 0.001219274287943816 16 0.0 8.128495252958772E-5 0.0 0.0 0.001219274287943816 17 0.0 8.128495252958772E-5 0.0 1.6256990505917544E-4 0.0013005592404734035 18 0.0 8.128495252958772E-5 0.0 1.6256990505917544E-4 0.0013005592404734035 19 0.0 8.128495252958772E-5 0.0 1.6256990505917544E-4 0.0013005592404734035 20 0.0 8.128495252958772E-5 0.0 1.6256990505917544E-4 0.0015444140980621667 21 0.0 8.128495252958772E-5 0.0 1.6256990505917544E-4 0.0015444140980621667 22 0.0 8.128495252958772E-5 0.0 1.6256990505917544E-4 0.0016256990505917545 23 0.0 8.128495252958772E-5 0.0 3.251398101183509E-4 0.0016256990505917545 24 0.0 8.128495252958772E-5 0.0 8.94134477825465E-4 0.0016256990505917545 25 0.0 8.128495252958772E-5 0.0 0.0010567043828846403 0.0016256990505917545 26 0.0 8.128495252958772E-5 0.0 0.0010567043828846403 0.001706984003121342 27 0.0 8.128495252958772E-5 0.0 0.0013005592404734035 0.001706984003121342 28 0.0 8.128495252958772E-5 0.0 0.0021946937182988685 0.001706984003121342 29 0.0 8.128495252958772E-5 0.0 0.004145532579008974 0.001706984003121342 30 0.0 8.128495252958772E-5 0.0 0.008372350110547535 0.001706984003121342 31 0.0 8.128495252958772E-5 0.0 0.020158668227337754 0.001706984003121342 32 0.0 8.128495252958772E-5 0.0 0.0324326960593055 0.001706984003121342 33 0.0 8.128495252958772E-5 0.0 0.04519443360645077 0.001706984003121342 34 0.0 8.128495252958772E-5 0.0 0.05820002601118481 0.001706984003121342 35 0.0 8.128495252958772E-5 0.0 0.07535115099492781 0.001706984003121342 36 0.0 8.128495252958772E-5 0.0 0.09900507218103785 0.001706984003121342 37 0.0 8.128495252958772E-5 0.0 0.13485173624658603 0.001706984003121342 38 0.0 8.128495252958772E-5 0.0 0.18557354662504877 0.001706984003121342 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1505 0.0 24.413427 1 GGTATCA 680 0.0 20.707125 1 GTATTGA 125 2.2864697E-8 19.361162 1 TAGACCG 70 8.126817E-4 18.855976 5 GTATTAC 130 3.5850462E-8 18.616503 1 CGCAATA 285 0.0 18.527428 36 TATTACC 60 0.007416561 18.331453 2 GTATAGA 160 1.1004886E-9 17.876074 1 GTGTATA 185 2.1827873E-11 17.838907 1 GTCCTAT 500 0.0 17.601057 1 GATCGGT 100 2.4843926E-5 17.59891 6 ATTATAC 150 9.607902E-9 17.598196 3 TAGGACA 390 0.0 17.486097 4 GGCGTTA 330 0.0 17.332964 42 ATACGAA 305 0.0 17.311106 40 TATAAGG 105 3.777751E-5 16.760185 2 TAGGACG 540 0.0 16.70267 4 GTCCTAC 655 0.0 16.459003 1 CGACGGT 375 0.0 16.425652 7 TGTAGGA 805 0.0 16.395834 2 >>END_MODULE