##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064146_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 805447 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.290103507741662 32.0 32.0 32.0 32.0 32.0 2 31.436844385788262 32.0 32.0 32.0 32.0 32.0 3 31.50557268200142 32.0 32.0 32.0 32.0 32.0 4 31.583793843666932 32.0 32.0 32.0 32.0 32.0 5 31.53547781542423 32.0 32.0 32.0 32.0 32.0 6 35.12932322052227 36.0 36.0 36.0 36.0 36.0 7 35.14055673433509 36.0 36.0 36.0 36.0 36.0 8 35.104525809891896 36.0 36.0 36.0 36.0 36.0 9 35.19572982455705 36.0 36.0 36.0 36.0 36.0 10 35.05730606731417 36.0 36.0 36.0 36.0 36.0 11 35.199304237274454 36.0 36.0 36.0 36.0 36.0 12 35.09551218143466 36.0 36.0 36.0 36.0 36.0 13 35.1370853699871 36.0 36.0 36.0 36.0 36.0 14 35.082062506906105 36.0 36.0 36.0 36.0 36.0 15 35.05523765064616 36.0 36.0 36.0 36.0 36.0 16 35.06566415915634 36.0 36.0 36.0 36.0 36.0 17 35.01751201506741 36.0 36.0 36.0 36.0 36.0 18 35.02015402627361 36.0 36.0 36.0 36.0 36.0 19 35.00398412310183 36.0 36.0 36.0 36.0 36.0 20 35.015638521218655 36.0 36.0 36.0 36.0 36.0 21 35.001719542067946 36.0 36.0 36.0 36.0 36.0 22 34.989112877694 36.0 36.0 36.0 36.0 36.0 23 34.9322835642817 36.0 36.0 36.0 32.0 36.0 24 34.897994529745596 36.0 36.0 36.0 32.0 36.0 25 34.864707423331396 36.0 36.0 36.0 32.0 36.0 26 34.81909672517248 36.0 36.0 36.0 32.0 36.0 27 34.817570864377174 36.0 36.0 36.0 32.0 36.0 28 34.78468726061429 36.0 36.0 36.0 32.0 36.0 29 34.75713609958197 36.0 36.0 36.0 32.0 36.0 30 34.72373477087878 36.0 36.0 36.0 32.0 36.0 31 34.72046081244328 36.0 36.0 36.0 32.0 36.0 32 34.66790862713499 36.0 36.0 36.0 32.0 36.0 33 34.632632563036424 36.0 36.0 36.0 32.0 36.0 34 34.615312987695035 36.0 36.0 36.0 32.0 36.0 35 34.557645630314596 36.0 36.0 36.0 32.0 36.0 36 34.540842538366896 36.0 36.0 36.0 32.0 36.0 37 34.52427782337013 36.0 36.0 36.0 32.0 36.0 38 34.46828034619286 36.0 36.0 36.0 32.0 36.0 39 34.47692151066426 36.0 36.0 36.0 32.0 36.0 40 34.43629189754261 36.0 36.0 36.0 32.0 36.0 41 34.41908778603682 36.0 36.0 36.0 32.0 36.0 42 34.320783366255014 36.0 36.0 36.0 32.0 36.0 43 34.32524548480533 36.0 36.0 36.0 32.0 36.0 44 34.23690695973789 36.0 36.0 36.0 32.0 36.0 45 34.19848109186576 36.0 36.0 36.0 32.0 36.0 46 34.16037057683498 36.0 36.0 36.0 32.0 36.0 47 34.10792019834949 36.0 36.0 36.0 32.0 36.0 48 34.05020317910427 36.0 36.0 36.0 32.0 36.0 49 34.020851775473744 36.0 36.0 36.0 32.0 36.0 50 33.420316917190085 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 9.0 21 32.0 22 108.0 23 276.0 24 733.0 25 1661.0 26 3425.0 27 6086.0 28 10054.0 29 14681.0 30 20870.0 31 29201.0 32 42019.0 33 66567.0 34 137597.0 35 472125.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.806107473049785 18.23115720149893 12.096491816224512 25.86624350922677 2 16.142336930948385 20.904324463244357 36.496527989014716 26.45681061679254 3 17.843055702127394 25.07682088783219 29.064181911862384 28.015941498178027 4 12.017550503012613 16.031843187695777 36.08157954527114 35.869026764020475 5 14.239298178526955 37.10871106354608 32.95536515748398 15.696625600442985 6 33.77168369247272 36.09909565407403 16.71885320394714 13.410367449506111 7 29.7667379315311 30.865756363555096 21.114016333807605 18.253489371106195 8 28.55197176226369 31.823074640541215 19.699992674874945 19.924960922320153 9 27.983690841121035 13.406386843415438 18.74994568166101 39.85997663380252 10 16.39851062588228 26.221973358628027 30.781101982893798 26.59841403259589 11 37.464165860695985 20.773185572731663 22.674862529750563 19.08778603682179 12 25.056397255188735 23.83670185623635 28.41788472736257 22.689016161212344 13 29.6005313832726 19.087212658840766 25.52464786546567 25.78760809242096 14 24.050526043955774 19.68400116208908 25.168540162841456 31.096932631113695 15 25.32639020810751 26.986805330512375 22.46123359668041 25.225570864699698 16 25.96493841875248 25.222487087802943 23.782777115613825 25.029797377830754 17 24.008407753706948 25.449843378893956 25.142312281255002 25.39943658614409 18 25.06626771536232 24.221641452861462 26.556996442960102 24.15509438881612 19 25.89096489278624 24.10276529678551 25.63967585700859 24.366593953419656 20 26.153406833531985 23.38287147397696 25.089888756456098 25.37383293603496 21 27.8995390137402 23.489689576098737 24.383603142106182 24.22716826805488 22 26.33091024216427 23.504522344790768 25.173413454674126 24.991153958370838 23 24.560983119701625 23.181730143673736 25.856803023455623 26.400483713169017 24 25.09001246517449 24.37574803462438 25.53163224258918 25.002607257611952 25 25.11683171267096 23.87215804686181 25.60526524895956 25.40574499150766 26 24.783584721056474 24.93531132511212 26.088408683430263 24.192695270401142 27 25.497981750705552 24.084648516701616 25.061801512538473 25.35556822005436 28 24.43917459213826 24.24573514439671 26.11867100394825 25.196419259516773 29 24.652700610482114 24.064070203580947 25.976591356904212 25.306637829032724 30 24.454476489876697 24.69695897414886 25.98374262340471 24.86482191256973 31 25.21722179593195 24.378506030558807 24.76849954929116 25.635772624218088 32 24.952602310101945 24.538035482152768 24.57900794493301 25.930354262812276 33 24.613428621801955 23.956002751380034 25.46131554703544 25.969253079782572 34 25.57643193875562 24.133101738328268 25.46208293965079 24.828383383265315 35 26.235805648191146 23.973276253808542 25.549709098042527 24.241208999957784 36 24.772718807037585 24.875401979165375 24.86248898049392 25.489390233303123 37 25.81062893581517 24.644535052345102 24.839960070720515 24.704875941119212 38 24.851719826521197 24.435032983569673 25.287279255923444 25.425967933985678 39 25.679247789643327 24.12017188696979 24.67628409275738 25.5242962306295 40 26.047236938327277 24.657418593072762 25.048886990659636 24.24645747794033 41 24.523262931403746 25.079864866039337 25.70636795820333 24.69050424435359 42 26.299518395695237 25.47226150406055 24.776486684801842 23.451733415442376 43 25.293569894342156 24.058453248575297 25.23397439876836 25.414002458314194 44 24.922184906292873 24.94800946072619 24.441575049507406 25.688230583473526 45 25.022472412320347 25.310764906286316 24.502503004598776 25.164259676794565 46 24.673902517152243 25.01247774491765 24.624488164145045 25.689131573785062 47 25.04261714593625 24.808579796803436 25.131762406773056 25.017040650487253 48 26.185974038873404 25.316630143959472 23.95947531458156 24.537920502585557 49 25.05140022149274 25.567016453037084 24.072437065767453 25.309146259702725 50 25.308930906002814 25.704615743712434 23.890573960287494 25.095879389997254 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 160.0 1 98.0 2 36.0 3 107.5 4 179.0 5 212.5 6 246.0 7 227.5 8 209.0 9 311.5 10 414.0 11 592.5 12 771.0 13 1384.0 14 1997.0 15 2640.5 16 3284.0 17 3488.5 18 3693.0 19 3650.0 20 3607.0 21 3736.0 22 3865.0 23 4174.0 24 4483.0 25 4593.5 26 4704.0 27 5753.5 28 6803.0 29 7800.0 30 8797.0 31 9949.0 32 11101.0 33 12872.0 34 14643.0 35 17161.5 36 19680.0 37 23688.0 38 27696.0 39 30139.0 40 32582.0 41 35773.5 42 38965.0 43 39218.0 44 39471.0 45 44605.5 46 49740.0 47 54069.0 48 58398.0 49 60913.5 50 63429.0 51 60422.0 52 57415.0 53 57272.5 54 57130.0 55 58609.0 56 60088.0 57 59201.5 58 58315.0 59 53251.0 60 48187.0 61 42368.5 62 36550.0 63 31702.5 64 26855.0 65 22866.0 66 18877.0 67 16411.0 68 13945.0 69 12734.0 70 11523.0 71 8877.0 72 6231.0 73 5271.0 74 4311.0 75 3354.5 76 2398.0 77 2137.0 78 1876.0 79 1531.5 80 1187.0 81 939.0 82 691.0 83 587.5 84 484.0 85 337.5 86 191.0 87 138.0 88 85.0 89 75.0 90 65.0 91 48.5 92 32.0 93 25.0 94 18.0 95 17.5 96 17.0 97 15.5 98 14.0 99 11.5 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009063290322019945 2 7.449279716728723E-4 3 2.4830932389095745E-4 4 0.0 5 0.0 6 3.7246398583643615E-4 7 1.2415466194547873E-4 8 0.0 9 0.0012415466194547872 10 9.932372955638298E-4 11 0.0 12 0.0 13 2.4830932389095745E-4 14 1.2415466194547873E-4 15 0.005711114449492021 16 8.69082633618351E-4 17 0.0 18 2.4830932389095745E-4 19 0.0 20 8.69082633618351E-4 21 0.0 22 2.4830932389095745E-4 23 0.001365701281400266 24 3.7246398583643615E-4 25 0.001862319929182181 26 0.006331887759219415 27 0.005711114449492021 28 0.003352175872527925 29 0.002234783915018617 30 0.003476330534473404 31 0.006083578435328457 32 0.003476330534473404 33 0.004097103844200797 34 0.002234783915018617 35 0.002607247900855053 36 0.007076815730892287 37 0.0028555572247460103 38 0.005711114449492021 39 0.004221258506146276 40 0.002234783915018617 41 0.0029797118866914892 42 0.001738165267236702 43 0.002110629253073138 44 0.0014898559433457446 45 0.001862319929182181 46 0.0016140106052912235 47 0.0024830932389095744 48 0.0014898559433457446 49 3.7246398583643615E-4 50 9.932372955638298E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 805447.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.40752664743381 #Duplication Level Percentage of deduplicated Percentage of total 1 76.32614108240517 39.23738131589536 2 13.981037813517982 14.374611479144106 3 4.466268092510896 6.887993879410116 4 1.8709794928566035 3.847297125433122 5 0.9365410867934971 2.4072630437876663 6 0.5455167541376927 1.682620024497302 7 0.34886466324032456 1.2553988630312505 8 0.23119230497470072 0.9508019662934858 9 0.17007698744430189 0.7868913537742392 >10 0.9043623144212593 8.528815140315992 >50 0.09893579533870804 3.628832300760778 >100 0.10622781093345748 11.210483942465778 >500 0.012154211776688894 4.235890917267833 >1k 0.001701589648736445 0.9657186479229963 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1241 0.1540759354743391 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1217 0.15109622358764763 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1097 0.13619766415419016 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1066 0.13234886963388032 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 1062 0.1318522509860984 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGG 1028 0.12763099247995213 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1017 0.12626529119855184 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 997 0.12378219795964229 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 975 0.12105079539684174 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 948 0.11769861952431383 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA 939 0.11658122756680453 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 919 0.11409813432789494 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 908 0.11273243304649468 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 899 0.11161504108898536 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 885 0.10987687582174865 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 849 0.10540730799171144 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAATAGAACCGCGGTC 841 0.1044140706961476 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCCTGCT 837 0.1039174520483657 No Hit CTTTAAATCCTTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCA 817 0.10143435880945612 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 1.2415466194547873E-4 0.0 6 0.0 0.0 0.0 1.2415466194547873E-4 0.0 7 0.0 0.0 0.0 1.2415466194547873E-4 0.0 8 0.0 0.0 0.0 1.2415466194547873E-4 1.2415466194547873E-4 9 0.0 0.0 0.0 1.2415466194547873E-4 2.4830932389095745E-4 10 0.0 0.0 0.0 1.2415466194547873E-4 2.4830932389095745E-4 11 0.0 0.0 0.0 1.2415466194547873E-4 2.4830932389095745E-4 12 0.0 0.0 0.0 1.2415466194547873E-4 4.966186477819149E-4 13 0.0 0.0 0.0 1.2415466194547873E-4 4.966186477819149E-4 14 0.0 0.0 0.0 1.2415466194547873E-4 4.966186477819149E-4 15 0.0 0.0 0.0 1.2415466194547873E-4 4.966186477819149E-4 16 0.0 0.0 0.0 2.4830932389095745E-4 4.966186477819149E-4 17 0.0 0.0 0.0 2.4830932389095745E-4 4.966186477819149E-4 18 0.0 0.0 0.0 2.4830932389095745E-4 7.449279716728723E-4 19 0.0 0.0 0.0 2.4830932389095745E-4 8.69082633618351E-4 20 0.0 0.0 0.0 3.7246398583643615E-4 8.69082633618351E-4 21 0.0 0.0 0.0 6.207733097273936E-4 8.69082633618351E-4 22 0.0 0.0 0.0 0.0012415466194547872 8.69082633618351E-4 23 0.0 0.0 0.0 0.0023589385769640955 8.69082633618351E-4 24 0.0 0.0 0.0 0.003600485196418883 8.69082633618351E-4 25 0.0 0.0 0.0 0.004345413168091755 8.69082633618351E-4 26 0.0 0.0 0.0 0.004966186477819149 8.69082633618351E-4 27 0.0 0.0 0.0 0.0059594237733829785 9.932372955638298E-4 28 0.0 0.0 0.0 0.009187444983965426 9.932372955638298E-4 29 0.0 0.0 0.0 0.018002425982094415 0.0011173919575093085 30 0.0 0.0 0.0 0.03116282014831516 0.0011173919575093085 31 0.0 0.0 0.0 0.055621288551574465 0.0011173919575093085 32 0.0 0.0 0.0 0.08219038620790692 0.0011173919575093085 33 0.0 0.0 0.0 0.10640054528727526 0.0011173919575093085 34 0.0 0.0 0.0 0.13023824038080717 0.001365701281400266 35 0.0 0.0 0.0 0.15904212195215825 0.001365701281400266 36 0.0 0.0 0.0 0.20001316039416622 0.001365701281400266 37 0.0 0.0 0.0 0.2643252752819242 0.001365701281400266 38 0.0 0.0 0.0 0.35446155985434175 0.0016140106052912233 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGCCG 50 0.0025801617 21.999317 32 TAGGACG 135 1.1277734E-10 21.184526 4 ACGTATG 65 4.9291656E-4 20.308323 22 AACGTAT 65 4.9312296E-4 20.307062 21 CAACGTA 65 4.9312296E-4 20.307062 20 TGCTACG 55 0.004479919 20.001863 10 GTTATAT 100 1.1221491E-6 19.800615 1 CTCGTTT 90 1.0010106E-5 19.556162 27 GTATATA 80 8.981682E-5 19.250599 1 CGTCGTA 275 0.0 19.201788 10 CCCTCGT 70 8.118416E-4 18.857727 25 ATACCGT 270 0.0 18.740158 6 GTATCAA 2110 0.0 18.664085 1 CCGTCGT 260 0.0 18.617119 9 GTCGTAG 260 0.0 18.617119 11 TAATACT 60 0.007411337 18.332764 4 CGTTTAG 60 0.007411337 18.332764 29 GGACGTG 160 1.1004886E-9 17.874445 6 GTATAAT 75 0.0012900946 17.600546 1 GTCGATA 75 0.0012906317 17.599453 36 >>END_MODULE