SRR4064142_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4064142_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1002310
Sequences flagged as poor quality	0
Sequence length	25
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	3097	0.3089862417814848	No Hit
TATCAACGCAGAGTACTTTTTTTTT	2281	0.22757430335924017	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	1894	0.18896349432810208	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	1331	0.1327932475980485	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	1254	0.12511099360477299	No Hit
CTTTAGGACGTGAAATATGGCGAGG	1143	0.11403657551057057	No Hit
GTACATGGGGTGGTATCAACGCAAA	1080	0.10775109497061788	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1073	0.10705270824395646	No Hit
GGTATCAACGCAGAGTACTTTTTTT	1069	0.10665363011443565	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	1029	0.10266284881922758	No Hit
GTCCTACAGTGGACATTTCTAAATT	1008	0.10056768863924334	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAGCCG	155	0.0	14.0998125	15
CTTATAC	70	7.292707E-6	13.564869	3
TCCTATA	80	2.0093757E-6	13.055534	2
CGTCGTA	190	0.0	13.001504	10
TTAAAGC	95	7.423114E-8	12.993717	3
GATATAC	245	0.0	12.787819	1
CCGTCGT	190	0.0	12.501447	9
CGCATCG	85	3.9342685E-6	12.295539	13
AATGCCG	140	5.2750693E-11	12.21814	18
TCGTTCT	70	1.0874542E-4	12.217529	19
TACCGTC	210	0.0	12.215698	7
GTCCTAG	140	5.2750693E-11	12.206554	1
GTAGCAC	55	0.0030782628	12.085065	3
TCAAATC	55	0.0030782628	12.085065	3
GTCGTAG	205	0.0	12.050174	11
TTTGCGC	95	1.0358344E-6	12.002587	17
TTGCGCG	80	2.854743E-5	11.878746	18
GTTTTCG	120	9.960786E-9	11.877561	15
ACCGTCG	200	0.0	11.876372	8
ATGCCGG	130	2.5975169E-9	11.695412	19