##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064142_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1002310 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.304616336263233 32.0 32.0 32.0 32.0 32.0 2 31.42068521714839 32.0 32.0 32.0 32.0 32.0 3 31.491787969789787 32.0 32.0 32.0 32.0 32.0 4 31.56593070008281 32.0 32.0 32.0 32.0 32.0 5 31.517306023086668 32.0 32.0 32.0 32.0 32.0 6 35.10393690574772 36.0 36.0 36.0 36.0 36.0 7 35.126179525296564 36.0 36.0 36.0 36.0 36.0 8 35.07409184783151 36.0 36.0 36.0 36.0 36.0 9 35.17648531891331 36.0 36.0 36.0 36.0 36.0 10 35.035195697937766 36.0 36.0 36.0 36.0 36.0 11 35.183208787700416 36.0 36.0 36.0 36.0 36.0 12 35.08842972732987 36.0 36.0 36.0 36.0 36.0 13 35.127370773513185 36.0 36.0 36.0 36.0 36.0 14 35.068199459249136 36.0 36.0 36.0 36.0 36.0 15 35.04195608145184 36.0 36.0 36.0 36.0 36.0 16 35.05952749149465 36.0 36.0 36.0 36.0 36.0 17 35.02981213397053 36.0 36.0 36.0 36.0 36.0 18 35.02085083457214 36.0 36.0 36.0 36.0 36.0 19 35.01734992168092 36.0 36.0 36.0 36.0 36.0 20 35.01028723648372 36.0 36.0 36.0 36.0 36.0 21 34.996530015663815 36.0 36.0 36.0 36.0 36.0 22 34.979831589029345 36.0 36.0 36.0 36.0 36.0 23 34.934035378276185 36.0 36.0 36.0 36.0 36.0 24 34.89845357224811 36.0 36.0 36.0 32.0 36.0 25 34.88291446757989 36.0 36.0 36.0 32.0 36.0 26 34.82306871127695 36.0 36.0 36.0 32.0 36.0 27 34.81595314822759 36.0 36.0 36.0 32.0 36.0 28 34.78048009098981 36.0 36.0 36.0 32.0 36.0 29 34.75022098951422 36.0 36.0 36.0 32.0 36.0 30 34.71895621115224 36.0 36.0 36.0 32.0 36.0 31 34.71621653979308 36.0 36.0 36.0 32.0 36.0 32 34.671611577256535 36.0 36.0 36.0 32.0 36.0 33 34.648767347427444 36.0 36.0 36.0 32.0 36.0 34 34.63318135107901 36.0 36.0 36.0 32.0 36.0 35 34.5987049914697 36.0 36.0 36.0 32.0 36.0 36 34.56117867725554 36.0 36.0 36.0 32.0 36.0 37 34.52573455318215 36.0 36.0 36.0 32.0 36.0 38 34.49468627470543 36.0 36.0 36.0 32.0 36.0 39 34.455992656962415 36.0 36.0 36.0 32.0 36.0 40 34.44812383394359 36.0 36.0 36.0 32.0 36.0 41 34.426977681555606 36.0 36.0 36.0 32.0 36.0 42 34.36756891580449 36.0 36.0 36.0 32.0 36.0 43 34.345870040207124 36.0 36.0 36.0 32.0 36.0 44 34.27793397252347 36.0 36.0 36.0 32.0 36.0 45 34.24674003052948 36.0 36.0 36.0 32.0 36.0 46 34.18591753050453 36.0 36.0 36.0 32.0 36.0 47 34.15914936496693 36.0 36.0 36.0 32.0 36.0 48 34.09283754527043 36.0 36.0 36.0 32.0 36.0 49 34.06794604463689 36.0 36.0 36.0 32.0 36.0 50 33.489719747383546 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 4.0 18 1.0 19 2.0 20 11.0 21 36.0 22 114.0 23 345.0 24 882.0 25 2025.0 26 4075.0 27 7302.0 28 11966.0 29 18280.0 30 25817.0 31 36321.0 32 52313.0 33 83494.0 34 172526.0 35 586796.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.11391465380993 18.618093360366544 12.06287217228883 26.2051198135347 2 15.131452265432706 20.971103548527743 38.57416370099661 25.323280485042947 3 17.94942657175211 25.345279131601657 29.40901222681719 27.296282069829044 4 11.81989604014726 16.704013728287656 37.17572407738125 34.300366154183834 5 13.40722930031627 37.930580359369856 34.01891630333929 14.643274036974589 6 32.742131161279765 36.901830575032825 17.29727788264685 13.058760381040557 7 28.935188649408516 31.2752853660897 21.471222946217182 18.3183030382846 8 27.074956849677246 34.552383992976225 19.722341391385896 18.65031776596063 9 27.679575374515487 13.828064591761906 18.899226275697277 39.59313375802533 10 15.551762050807245 27.349850044597513 32.4823555469531 24.61603235764214 11 36.5047739721244 20.899023256278 23.821472398758868 18.774730372838743 12 24.81041200033922 23.762627144432084 30.07707234823731 21.349888506991384 13 29.807763297835194 20.115214315787792 25.66880772937606 24.408214657000958 14 23.05281715083303 20.43715149150909 26.010394020993566 30.499637336664314 15 24.276281262035372 29.151592310931164 22.630091773143334 23.942034653890133 16 24.272775525189964 26.10804705957474 25.685819871017173 23.93335754421812 17 22.964452115612936 26.722072013648475 26.342049864812285 23.97142600592631 18 23.764903073899294 25.255659426724268 28.17012700661472 22.80931049276172 19 25.19272998646126 24.838248484249867 26.262360210274476 23.706661319014398 20 25.61536151460096 24.775191385387764 26.111821146825744 23.497625953185533 21 26.18800570681725 24.34117189292734 25.235306442118706 24.235515958136705 22 25.41938290302562 25.323404229845973 25.762292154292204 23.4949207128362 23 23.649934201533867 25.224607728401494 26.41127483405717 24.714183236007475 24 24.47593192876805 25.259427538379114 26.522418869343902 23.74222166350894 25 24.292917804064302 25.22318934278371 26.54586306530658 23.938029787845412 26 23.333516256005268 26.16366257751348 27.00108256963118 23.50173859685007 27 24.153362155754824 25.700912665668223 26.10391437485844 24.041810803718512 28 23.382661654015312 25.76596585330811 26.476656848894102 24.374715643782476 29 23.92388177790105 25.26182724839192 26.195695227794946 24.618595745912085 30 23.567202450437506 25.63341215440949 26.658485238508582 24.140900156644417 31 24.654267526092074 25.102472511025525 25.81000179601285 24.43325816686955 32 23.984778537498418 25.947026197557744 25.752567424513778 24.315627840430064 33 23.549554457371883 25.542149200657317 26.57062381954401 24.337672522426793 34 24.198203896911146 25.630935835359548 26.63025638518539 23.540603882543916 35 24.597491511827567 25.618466751207503 26.40707109910733 23.376970637857596 36 23.63308182451323 25.952237936257383 26.298170657481705 24.116509581747682 37 24.422254549227844 25.867890303694256 25.533744804232043 24.176110342845856 38 24.023907165164985 26.061404296504726 25.954540465571085 23.960148072759203 39 24.825342978298828 25.18882514342729 25.698977301072585 24.286854577201296 40 25.246861415388665 25.375467806996628 26.246479287785984 23.13119148982872 41 24.225109002564178 25.44454089217476 26.73740608817983 23.592944017081223 42 24.837122338334567 26.43706486970785 25.93511233320629 22.790700458751296 43 23.890918124739972 25.73568806726177 26.393878835829444 23.97951497216882 44 23.560205767557687 26.28694517388077 25.708772657977285 24.444076400584258 45 23.7614624894367 26.452696871467467 25.733344906818477 24.05249573227735 46 23.704926079868464 25.607054987638406 25.847103356486794 24.840915576006335 47 24.518800983350094 25.4978608942739 25.941046884727744 24.04229123764826 48 24.490015823826734 25.93780617508376 25.193407869610073 24.37877013147944 49 24.15075665666305 26.14885304258987 25.422925579464913 24.277464721282165 50 24.004709192403435 26.90395542230581 24.901251627514853 24.190083757775906 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 148.0 1 91.0 2 34.0 3 124.0 4 214.0 5 232.0 6 250.0 7 241.0 8 232.0 9 327.0 10 422.0 11 634.0 12 846.0 13 1544.5 14 2243.0 15 2814.5 16 3386.0 17 3636.5 18 3887.0 19 3988.0 20 4089.0 21 4415.5 22 4742.0 23 5394.0 24 6046.0 25 6786.0 26 7526.0 27 9849.0 28 12172.0 29 14638.5 30 17105.0 31 20073.5 32 23042.0 33 27873.0 34 32704.0 35 37399.5 36 42095.0 37 45335.0 38 48575.0 39 49363.5 40 50152.0 41 51962.0 42 53772.0 43 54213.5 44 54655.0 45 58781.5 46 62908.0 47 66259.5 48 69611.0 49 71391.5 50 73172.0 51 69952.5 52 66733.0 53 65704.0 54 64675.0 55 64291.0 56 63907.0 57 61578.0 58 59249.0 59 53686.0 60 48123.0 61 42397.5 62 36672.0 63 32053.0 64 27434.0 65 23269.5 66 19105.0 67 16529.5 68 13954.0 69 12407.5 70 10861.0 71 8502.0 72 6143.0 73 5259.5 74 4376.0 75 3431.0 76 2486.0 77 2153.5 78 1821.0 79 1495.5 80 1170.0 81 950.5 82 731.0 83 581.5 84 432.0 85 313.5 86 195.0 87 142.0 88 89.0 89 72.5 90 56.0 91 37.5 92 19.0 93 19.0 94 19.0 95 18.5 96 18.0 97 12.0 98 6.0 99 7.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008580179784697349 2 6.983867266614122E-4 3 4.988476619010087E-4 4 0.0 5 0.0 6 1.9953906476040346E-4 7 9.976953238020173E-5 8 0.0 9 0.001496542985703026 10 0.0011972343885624209 11 0.0 12 4.988476619010087E-4 13 3.990781295208069E-4 14 2.993085971406052E-4 15 0.005587093813291298 16 5.986171942812104E-4 17 0.0 18 0.0 19 9.976953238020173E-5 20 0.0012970039209426226 21 0.0 22 3.990781295208069E-4 23 6.983867266614122E-4 24 6.983867266614122E-4 25 0.0021949297123644382 26 0.006485019604713113 27 0.008081332122796341 28 0.00458939848948928 29 0.002693777374265447 30 0.0039907812952080695 31 0.008979257914218155 32 0.004090550827588271 33 0.004888707086629885 34 0.0028933164390258503 35 0.003292394568546657 36 0.00917879697897856 37 0.0051880156837704906 38 0.009976953238020173 39 0.005986171942812104 40 0.002693777374265447 41 0.0039907812952080695 42 0.0023944687771248418 43 0.0016960820504634295 44 0.0013967734533228244 45 0.001895621115223833 46 0.0011972343885624209 47 0.0021949297123644382 48 0.0023944687771248418 49 5.986171942812104E-4 50 0.001496542985703026 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1002310.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.9100554343672 #Duplication Level Percentage of deduplicated Percentage of total 1 78.94092930310833 47.29355450589683 2 13.044051780082386 15.629397304669837 3 3.8583884975373106 6.934688063243553 4 1.497141312646647 3.587752761349676 5 0.7383511974009489 2.2117330583161126 6 0.44027533356784126 1.5826151784260327 7 0.28837713396403103 1.2093683057252325 8 0.18988800023951408 0.9100960496536337 9 0.13903592695721703 0.749668508223795 >10 0.7323596929916808 7.969780904439316 >50 0.06569275781659059 2.8087263418338457 >100 0.06048279333623264 7.092276819343982 >500 0.0050262703511477335 2.0203421988781027 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.976953238020173E-5 2 0.0 0.0 0.0 0.0 9.976953238020173E-5 3 0.0 0.0 0.0 0.0 9.976953238020173E-5 4 0.0 0.0 0.0 0.0 9.976953238020173E-5 5 0.0 0.0 0.0 0.0 9.976953238020173E-5 6 0.0 0.0 0.0 0.0 9.976953238020173E-5 7 0.0 0.0 0.0 0.0 9.976953238020173E-5 8 0.0 0.0 0.0 0.0 9.976953238020173E-5 9 0.0 0.0 0.0 0.0 9.976953238020173E-5 10 0.0 0.0 0.0 0.0 9.976953238020173E-5 11 0.0 0.0 0.0 0.0 9.976953238020173E-5 12 0.0 0.0 0.0 9.976953238020173E-5 1.9953906476040346E-4 13 0.0 0.0 0.0 9.976953238020173E-5 1.9953906476040346E-4 14 0.0 0.0 0.0 1.9953906476040346E-4 1.9953906476040346E-4 15 0.0 0.0 0.0 1.9953906476040346E-4 1.9953906476040346E-4 16 0.0 0.0 0.0 3.990781295208069E-4 1.9953906476040346E-4 17 0.0 0.0 0.0 3.990781295208069E-4 1.9953906476040346E-4 18 0.0 0.0 0.0 4.988476619010087E-4 2.993085971406052E-4 19 0.0 0.0 0.0 4.988476619010087E-4 2.993085971406052E-4 20 0.0 0.0 0.0 9.976953238020174E-4 3.990781295208069E-4 21 0.0 0.0 0.0 0.0013967734533228242 3.990781295208069E-4 22 0.0 0.0 0.0 0.0016960820504634295 4.988476619010087E-4 23 0.0 0.0 0.0 0.0027935469066456484 4.988476619010087E-4 24 0.0 0.0 0.0 0.0046891680218694816 4.988476619010087E-4 25 0.0 0.0 0.0 0.005287785216150692 4.988476619010087E-4 26 0.0 0.0 0.0 0.005986171942812104 5.986171942812104E-4 27 0.0 0.0 0.0 0.006784328201853718 5.986171942812104E-4 28 0.0 0.0 0.0 0.009378336043738963 5.986171942812104E-4 29 0.0 0.0 0.0 0.014765890792269856 5.986171942812104E-4 30 0.0 0.0 0.0 0.026239387015993057 5.986171942812104E-4 31 0.0 0.0 0.0 0.049086609931059254 5.986171942812104E-4 32 0.0 0.0 0.0 0.07183406331374524 5.986171942812104E-4 33 0.0 0.0 0.0 0.09438197763167085 5.986171942812104E-4 34 0.0 0.0 0.0 0.11972343885624208 5.986171942812104E-4 35 0.0 0.0 0.0 0.14725982979317775 5.986171942812104E-4 36 0.0 0.0 0.0 0.18816533806906047 5.986171942812104E-4 37 0.0 0.0 0.0 0.250720834871447 5.986171942812104E-4 38 0.0 0.0 0.0 0.33313046861749357 5.986171942812104E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGTAGGA 900 0.0 22.732046 2 TTAGGAC 595 0.0 22.55222 3 TAGGACG 850 0.0 21.73886 4 GTAGGAC 880 0.0 21.247736 3 CTGTAGG 930 0.0 20.817062 1 AGGACGT 870 0.0 20.733421 5 GTATAGG 65 4.9315806E-4 20.307554 1 GGACGTG 875 0.0 20.112143 6 GATTTCG 395 0.0 20.049496 41 GCGAATT 55 0.0044832616 19.999865 13 GACGTGG 435 0.0 19.722036 7 ACCGTCG 225 0.0 19.55347 8 ATCACGG 510 0.0 19.411633 35 ATTTCGT 420 0.0 19.379854 42 AATCACG 500 0.0 19.359869 34 TGGCGAG 1040 0.0 19.038332 18 GCGAGAA 620 0.0 18.8082 20 TCACGGA 495 0.0 18.66654 36 GTCCTAC 850 0.0 18.635166 1 TAGGACC 735 0.0 18.555845 4 >>END_MODULE