##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064140_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 117349 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.40451985104262 32.0 32.0 32.0 32.0 32.0 2 31.478402031546924 32.0 32.0 32.0 32.0 32.0 3 31.523438631773598 32.0 32.0 32.0 32.0 32.0 4 31.572642289239788 32.0 32.0 32.0 32.0 32.0 5 31.555394592199338 32.0 32.0 32.0 32.0 32.0 6 35.106980033915924 36.0 36.0 36.0 36.0 36.0 7 35.1353057972373 36.0 36.0 36.0 36.0 36.0 8 35.08827514508006 36.0 36.0 36.0 36.0 36.0 9 35.199089894247074 36.0 36.0 36.0 36.0 36.0 10 35.09946399202379 36.0 36.0 36.0 36.0 36.0 11 35.19309921686593 36.0 36.0 36.0 36.0 36.0 12 35.11381434865231 36.0 36.0 36.0 36.0 36.0 13 35.149613545918584 36.0 36.0 36.0 36.0 36.0 14 35.10083596792474 36.0 36.0 36.0 36.0 36.0 15 35.08235264041449 36.0 36.0 36.0 36.0 36.0 16 35.121705340480105 36.0 36.0 36.0 36.0 36.0 17 35.081790215511 36.0 36.0 36.0 36.0 36.0 18 35.08115961789193 36.0 36.0 36.0 36.0 36.0 19 35.048223674679804 36.0 36.0 36.0 36.0 36.0 20 35.08306845392803 36.0 36.0 36.0 36.0 36.0 21 35.049996165284746 36.0 36.0 36.0 36.0 36.0 22 35.01344706814715 36.0 36.0 36.0 36.0 36.0 23 34.99018312895721 36.0 36.0 36.0 36.0 36.0 24 34.99436722937563 36.0 36.0 36.0 36.0 36.0 25 34.963638377830236 36.0 36.0 36.0 36.0 36.0 26 34.91605382235895 36.0 36.0 36.0 36.0 36.0 27 34.92491627538369 36.0 36.0 36.0 36.0 36.0 28 34.926978500029826 36.0 36.0 36.0 36.0 36.0 29 34.89469871920511 36.0 36.0 36.0 36.0 36.0 30 34.9053166196559 36.0 36.0 36.0 36.0 36.0 31 34.86863117708715 36.0 36.0 36.0 32.0 36.0 32 34.86486463455164 36.0 36.0 36.0 32.0 36.0 33 34.83537993506549 36.0 36.0 36.0 32.0 36.0 34 34.822265208906764 36.0 36.0 36.0 32.0 36.0 35 34.800415853565006 36.0 36.0 36.0 32.0 36.0 36 34.79213286862266 36.0 36.0 36.0 32.0 36.0 37 34.7971776495752 36.0 36.0 36.0 32.0 36.0 38 34.77099932679443 36.0 36.0 36.0 32.0 36.0 39 34.79647035765111 36.0 36.0 36.0 32.0 36.0 40 34.73894110729533 36.0 36.0 36.0 32.0 36.0 41 34.73582220555778 36.0 36.0 36.0 32.0 36.0 42 34.680730129783804 36.0 36.0 36.0 32.0 36.0 43 34.70577508116814 36.0 36.0 36.0 32.0 36.0 44 34.661991154590154 36.0 36.0 36.0 32.0 36.0 45 34.65107499850872 36.0 36.0 36.0 32.0 36.0 46 34.60326888171182 36.0 36.0 36.0 32.0 36.0 47 34.60509250185345 36.0 36.0 36.0 32.0 36.0 48 34.56630222669132 36.0 36.0 36.0 32.0 36.0 49 34.555530937630486 36.0 36.0 36.0 32.0 36.0 50 33.97515956676239 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 1.0 21 5.0 22 7.0 23 15.0 24 67.0 25 167.0 26 334.0 27 659.0 28 1222.0 29 1853.0 30 2652.0 31 3751.0 32 5444.0 33 8327.0 34 17845.0 35 75000.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.87250615737308 21.706338046173908 12.94284082870998 25.47831496774304 2 14.448354907157283 22.575394762631127 39.434507324306125 23.54174300590546 3 16.48529574680222 27.166438000119303 30.45838410866916 25.889882144409317 4 11.341383394830803 18.613707828784225 40.1298690231702 29.915039753214767 5 12.079353040929194 38.977750129954245 35.816240445167836 13.126656383948735 6 29.014307748681283 40.49374089255128 18.45094547034913 12.041005888418308 7 27.205174309112135 32.24654662587666 23.60139413203351 16.9468849329777 8 25.041542748553457 35.87844804812993 21.210236133243573 17.86977307007303 9 26.307222960766268 15.572485257524626 21.28455533967345 36.83573644203565 10 13.917459884617678 29.7693205736734 34.84051845350194 21.47270108820697 11 32.429760798984226 24.50979556706917 24.73732200530043 18.323121628646174 12 21.962027473838496 27.604219927054572 30.793878037972526 19.639874561134405 13 27.605072093261068 22.671881923850428 26.885843814977672 22.83720216791083 14 21.723235817944765 21.88088522271174 28.70667836964951 27.68920058969399 15 23.25706250798926 30.12654991691167 23.90557757041203 22.710810004687033 16 22.49188318605186 29.05350706013686 26.566055100597364 21.88855465321392 17 20.88812005215213 29.09270637159243 27.261416799461436 22.757756776794007 18 21.407084849466123 29.184739537618558 28.198791638616434 21.209383974298888 19 22.51318715966902 28.360701838106845 28.198791638616434 20.9273193636077 20 23.537682789651292 28.04478985581348 27.43378668575519 20.983740668780037 21 24.37174581802998 27.510247211309853 26.79187722093925 21.326129749720916 22 22.778402699662543 28.39503016668371 27.009407914919727 21.817159218734023 23 22.409414732249378 28.341343695674404 27.570985445001195 21.678256127075024 24 22.31378196661241 28.220947771178277 27.519620959701403 21.945649302507903 25 22.258581313699423 28.043085523400485 27.98087739032621 21.71745577257388 26 22.215404543982547 27.420701879974775 28.400743126928123 21.963150449114554 27 22.128290566970335 28.3817526396973 27.56108161543509 21.928875177897275 28 22.61280838552985 27.278537645404576 28.336102944309516 21.772551024756062 29 22.069776558212464 28.3477919997273 27.80921377805805 21.773217664002182 30 21.946584401418054 28.22641123534224 27.628170166348514 22.19883419689119 31 22.92037736170648 27.67745289370297 27.558994724776507 21.843175019814044 32 21.541791655304063 28.517862012544313 27.54550722661576 22.394839105535862 33 22.299393236978457 28.126704390509953 27.924734115080447 21.649168257431143 34 22.187755658576496 27.610274065994002 28.364466866648485 21.83750340878102 35 22.399100081810744 28.040632669757294 27.569368693755113 21.990898554676846 36 22.266726890004346 27.808694318268977 27.72688148217588 22.197697309550797 37 22.43943177073125 27.657289917935696 27.62831602000903 22.274962291324023 38 22.131035775766563 27.728349610540132 28.44676245504593 21.693852158647374 39 21.8754793516609 27.881649140149644 27.578272800095444 22.664598708094015 40 22.032945026289553 27.754437693336854 28.223985274442466 21.988632005931127 41 22.32438835249303 27.58315082618218 27.48174218343886 22.61071863788593 42 22.029536332415827 27.760402907615873 27.50901173442866 22.70104902553964 43 22.02830872014248 27.158305567154382 28.221799930122966 22.591585782580168 44 21.683369124314005 27.738862187681086 28.006442376521118 22.57132631148379 45 21.227460203838156 27.83089613798275 28.15131063162559 22.7903330265535 46 21.727681767051845 27.59399393257661 28.023485700651058 22.654838599720488 47 21.50715399626748 27.630020366945896 28.163480958183847 22.699344678602777 48 21.68251695810751 28.19136244333095 27.607628591880562 22.518492006680983 49 22.227903330265537 26.53901216893343 28.464907795616455 22.76817670518458 50 21.195077887991275 26.8517571667178 29.115110611173606 22.838054334117327 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 0.5 2 1.0 3 6.5 4 12.0 5 10.5 6 9.0 7 12.5 8 16.0 9 19.5 10 23.0 11 43.5 12 64.0 13 99.5 14 135.0 15 149.5 16 164.0 17 177.0 18 190.0 19 226.5 20 263.0 21 351.5 22 440.0 23 622.0 24 804.0 25 1056.0 26 1308.0 27 1677.5 28 2047.0 29 2405.0 30 2763.0 31 3408.0 32 4053.0 33 4475.5 34 4898.0 35 5647.5 36 6397.0 37 7072.5 38 7748.0 39 8653.5 40 9559.0 41 10060.0 42 10561.0 43 10218.5 44 9876.0 45 9877.5 46 9879.0 47 9579.0 48 9279.0 49 8808.5 50 8338.0 51 7983.5 52 7629.0 53 6802.5 54 5976.0 55 5457.5 56 4939.0 57 4211.0 58 3483.0 59 2888.5 60 2294.0 61 1991.0 62 1688.0 63 1428.0 64 1168.0 65 895.5 66 623.0 67 430.0 68 237.0 69 185.0 70 133.0 71 120.5 72 108.0 73 90.0 74 72.0 75 83.0 76 94.0 77 66.5 78 39.0 79 30.0 80 21.0 81 13.0 82 5.0 83 4.5 84 4.0 85 2.0 86 0.0 87 0.0 88 0.0 89 0.5 90 1.0 91 3.0 92 5.0 93 2.5 94 0.0 95 0.0 96 0.0 97 1.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008521589446863629 2 0.0 3 0.0017043178893727258 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 8.521589446863629E-4 10 0.0 11 0.0 12 8.521589446863629E-4 13 8.521589446863629E-4 14 0.0 15 0.0034086357787454515 16 0.0 17 0.0 18 0.0 19 0.0 20 8.521589446863629E-4 21 0.0 22 8.521589446863629E-4 23 8.521589446863629E-4 24 0.0 25 8.521589446863629E-4 26 0.0059651126128045405 27 0.005112953668118177 28 0.0034086357787454515 29 0.0025564768340590885 30 0.0042607947234318145 31 0.006817271557490903 32 0.0042607947234318145 33 0.0042607947234318145 34 0.0042607947234318145 35 0.0042607947234318145 36 0.006817271557490903 37 0.0017043178893727258 38 0.0059651126128045405 39 0.0025564768340590885 40 0.0017043178893727258 41 0.0017043178893727258 42 0.0017043178893727258 43 0.0 44 8.521589446863629E-4 45 8.521589446863629E-4 46 8.521589446863629E-4 47 0.0017043178893727258 48 8.521589446863629E-4 49 8.521589446863629E-4 50 8.521589446863629E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 117349.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.93562791331839 #Duplication Level Percentage of deduplicated Percentage of total 1 61.78276597718207 28.38030149383463 2 16.13764956868565 14.825861319653342 3 7.8044708283090625 10.755098040886587 4 4.361376495686856 8.013702715830556 5 2.8698636490121507 6.591449437149017 6 1.8681012893052593 5.148744343795005 7 1.2818847973286336 4.1218928154479375 8 0.8681940450793062 3.1904830889057427 9 0.673406919580744 2.784003272290348 >10 2.3430108524255635 15.885094887898491 >50 0.009275577404693442 0.3033685843083452 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 0.0 0.0 23 0.0 0.0 0.0 0.0 0.0 24 0.0 0.0 0.0 0.0 0.0 25 0.0 0.0 0.0 0.0 0.0 26 0.0 0.0 0.0 0.0 0.0 27 0.0 0.0 0.0 8.521589446863629E-4 0.0 28 0.0 0.0 0.0 0.0017043178893727258 0.0 29 0.0 0.0 0.0 0.005112953668118177 0.0 30 0.0 0.0 0.0 0.013634543114981806 0.0 31 0.0 0.0 0.0 0.057946808238672674 0.0 32 0.0 0.0 0.0 0.09118100708144083 0.0 33 0.0 0.0 0.0 0.1286760006476408 0.0 34 0.0 0.0 0.0 0.18236201416288167 0.0 35 0.0 0.0 0.0 0.23604802767812252 0.0 36 0.0 0.0 0.0 0.3212639221467588 0.0 37 0.0 0.0 0.0 0.45760935329657687 0.0 38 0.0 0.0 0.0 0.6459364800722631 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 30 1.2908118E-4 36.681946 1 GTATCAA 165 0.0 29.345556 1 GTTATAA 30 0.005712508 29.345556 1 GGTAATA 30 0.005724433 29.333048 13 TTATGGT 30 0.005724433 29.333048 4 GATCTTT 30 0.005724433 29.333048 22 GTATACA 40 6.977058E-4 27.511463 1 CCATATC 40 6.9944846E-4 27.499735 9 ATCAACG 210 0.0 23.047396 3 CAACGCA 220 0.0 21.999788 5 AACGCAG 220 0.0 21.999788 6 TCAACGC 220 0.0 21.999788 4 TTTATGG 50 0.0025668456 21.999786 3 AGTGAGG 60 2.8516093E-4 21.999784 6 TATCAAC 245 0.0 21.55081 2 ACCATAT 55 0.0044601858 19.999807 8 TAGAATA 55 0.0044601858 19.999807 43 CTTATAC 110 1.2415512E-7 19.999807 43 CCCATAG 55 0.0044601858 19.999807 3 TTATGGA 60 0.0073736897 18.333155 2 >>END_MODULE