##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064139_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1120967 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.34356854394465 32.0 32.0 32.0 32.0 32.0 2 31.403192065422086 32.0 32.0 32.0 32.0 32.0 3 31.478277237420905 32.0 32.0 32.0 32.0 32.0 4 31.564210186383722 32.0 32.0 32.0 32.0 32.0 5 31.510959733872628 32.0 32.0 32.0 32.0 32.0 6 35.11050191486458 36.0 36.0 36.0 36.0 36.0 7 35.11743610650447 36.0 36.0 36.0 36.0 36.0 8 35.064246315904036 36.0 36.0 36.0 36.0 36.0 9 35.176951685464424 36.0 36.0 36.0 36.0 36.0 10 35.033463072507935 36.0 36.0 36.0 36.0 36.0 11 35.177227340323135 36.0 36.0 36.0 36.0 36.0 12 35.08066428360514 36.0 36.0 36.0 36.0 36.0 13 35.12240146230888 36.0 36.0 36.0 36.0 36.0 14 35.05976536329794 36.0 36.0 36.0 36.0 36.0 15 35.037630902604626 36.0 36.0 36.0 36.0 36.0 16 35.04490587144849 36.0 36.0 36.0 36.0 36.0 17 35.01019744559831 36.0 36.0 36.0 36.0 36.0 18 35.00529275170455 36.0 36.0 36.0 36.0 36.0 19 35.001454993768775 36.0 36.0 36.0 36.0 36.0 20 34.99308008175085 36.0 36.0 36.0 36.0 36.0 21 34.99695263107656 36.0 36.0 36.0 36.0 36.0 22 34.963708119864364 36.0 36.0 36.0 36.0 36.0 23 34.92408697133814 36.0 36.0 36.0 32.0 36.0 24 34.89215561207422 36.0 36.0 36.0 32.0 36.0 25 34.860571274622714 36.0 36.0 36.0 32.0 36.0 26 34.80097094740523 36.0 36.0 36.0 32.0 36.0 27 34.792953762242774 36.0 36.0 36.0 32.0 36.0 28 34.765713888098404 36.0 36.0 36.0 32.0 36.0 29 34.74034918066277 36.0 36.0 36.0 32.0 36.0 30 34.72032182927776 36.0 36.0 36.0 32.0 36.0 31 34.71123592398349 36.0 36.0 36.0 32.0 36.0 32 34.66589382203044 36.0 36.0 36.0 32.0 36.0 33 34.65047053124668 36.0 36.0 36.0 32.0 36.0 34 34.645497146659984 36.0 36.0 36.0 32.0 36.0 35 34.61076909489753 36.0 36.0 36.0 32.0 36.0 36 34.57499016474169 36.0 36.0 36.0 32.0 36.0 37 34.566419885687985 36.0 36.0 36.0 32.0 36.0 38 34.53029036537204 36.0 36.0 36.0 32.0 36.0 39 34.52218664777821 36.0 36.0 36.0 32.0 36.0 40 34.5004402448957 36.0 36.0 36.0 32.0 36.0 41 34.489154453253306 36.0 36.0 36.0 32.0 36.0 42 34.41591411700791 36.0 36.0 36.0 32.0 36.0 43 34.415452908069554 36.0 36.0 36.0 32.0 36.0 44 34.33933915985038 36.0 36.0 36.0 32.0 36.0 45 34.316894252908426 36.0 36.0 36.0 32.0 36.0 46 34.289374263470734 36.0 36.0 36.0 32.0 36.0 47 34.265568923973674 36.0 36.0 36.0 32.0 36.0 48 34.2105708731836 36.0 36.0 36.0 32.0 36.0 49 34.19660703660322 36.0 36.0 36.0 32.0 36.0 50 33.60925165504426 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 16.0 21 45.0 22 143.0 23 412.0 24 980.0 25 2193.0 26 4328.0 27 7873.0 28 12797.0 29 19713.0 30 28325.0 31 39840.0 32 57656.0 33 93371.0 34 194790.0 35 658482.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.7646817413337 17.882974310019495 11.796335865603796 26.556008083043007 2 16.122102701439307 20.47168582587394 36.974266654058404 26.43194481862835 3 18.464586667523076 24.194218894128436 28.67554832367199 28.665646114676502 4 12.457637022320906 16.10002792232064 35.59551708480267 35.846817970555776 5 14.533790914451542 36.76682721257629 33.17020037164341 15.529181501328765 6 34.49206710289795 35.40904488543353 16.59882333525132 13.500064676417194 7 30.219979713943406 30.366817221202762 20.612471196743527 18.8007318681103 8 28.232142427029522 33.0192592645457 19.127770933488677 19.620827374936102 9 27.901976876962603 13.77123180131316 18.024728803882386 40.302062517841854 10 16.136868276416397 26.688974906352676 31.1528233364051 26.021333480825824 11 37.9035243678003 20.59132873670679 22.272020496589107 19.233126398903806 12 25.20939510262122 23.137969271173905 28.60378583847696 23.048849787727917 13 30.10560553238106 19.15467401272476 24.91079106911551 25.82892938577867 14 24.014330522657286 19.424531028650343 24.67643920768196 31.884699241010416 15 25.374114338834204 27.18549326710167 21.824511068645766 25.615881325418364 16 25.944861448867844 25.3148646068809 23.710344187739416 25.029929756511844 17 24.48109534000555 25.569352175398564 24.864335881430943 25.085216603164945 18 25.13938920320225 24.586382053985773 25.966625095230704 24.307603647581274 19 26.379925885352456 24.19065341856934 24.72251611556461 24.70690458051359 20 26.40781116186126 23.92520696545818 24.475092777619185 25.191889095061377 21 27.438274275692326 23.710064613855717 23.85886471234211 24.992796398109846 22 26.517979167930463 23.913524430757814 24.467779518343143 25.100716882968587 23 24.966724831304706 23.714222502934994 25.06904820528192 26.250004460478376 24 25.427177727701743 24.44230937355593 24.82278614261679 25.307726756125543 25 25.467549011911306 24.017531526773674 24.969401009142228 25.545518452172793 26 25.041171758047447 24.969266152443453 25.23458534731478 24.754976742194316 27 25.728131520888702 24.37914671648302 24.51921061059829 25.373511152029987 28 25.049757657237322 24.47505783128876 25.065726497480224 25.409458013993703 29 25.01802039694831 24.37223003304334 24.845310057879374 25.764439512128977 30 24.916364985877948 24.695836180640924 25.12083586840354 25.26696296507759 31 25.758377322771704 24.30233211676553 24.226679501442128 25.71261105902064 32 25.52661159384088 24.507645369065248 24.199867967955466 25.7658750691384 33 25.009032670164355 24.105854865286087 24.961750544859584 25.923361919689974 34 25.706035008024493 24.27322352697684 25.082096056623755 24.938645408374914 35 26.020211535991095 24.1944289812872 24.99776973693601 24.787589745785695 36 25.02774585864065 24.746451028113427 24.623691216249973 25.602111896995954 37 25.929576962192446 24.59132513783075 24.394079968597783 25.08501793137902 38 25.370172942157833 24.40763853884619 24.73309275177425 25.48909576722173 39 25.952778580681073 24.02982518118851 24.38988270474926 25.62751353338115 40 26.321513002364068 24.35175520763638 24.6069851465275 24.719746643472053 41 25.18352851126239 24.535502697282556 25.389248159808304 24.891720631646745 42 26.35286309186088 24.81658512912193 24.551454294370163 24.279097484647032 43 25.365580807810478 24.12244548403327 25.101788116571928 25.410185591584327 44 25.081515169627384 24.716826782829315 24.437511876013083 25.764146171530218 45 25.190908474552074 24.89285930937521 24.55198955177545 25.364242664297258 46 25.070296637536977 24.370987828333472 24.642182978222316 25.916532555907235 47 25.561377011799824 24.262566807232087 24.977050695437526 25.199005485530563 48 26.096447796399087 24.729735275278383 24.015333586692574 25.158483341629957 49 25.27980331250011 25.01476405171968 24.21224194132561 25.493190694454604 50 25.320419321773525 25.338796541871066 24.059617129353327 25.281167007002075 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 21.0 1 23.5 2 26.0 3 53.0 4 80.0 5 97.5 6 115.0 7 114.0 8 113.0 9 157.0 10 201.0 11 323.0 12 445.0 13 815.0 14 1185.0 15 1602.0 16 2019.0 17 2172.5 18 2326.0 19 2306.5 20 2287.0 21 2527.0 22 2767.0 23 3229.5 24 3692.0 25 4451.0 26 5210.0 27 6938.5 28 8667.0 29 10373.0 30 12079.0 31 14115.5 32 16152.0 33 19235.5 34 22319.0 35 26475.0 36 30631.0 37 35145.0 38 39659.0 39 42561.5 40 45464.0 41 49604.5 42 53745.0 43 55613.5 44 57482.0 45 63714.0 46 69946.0 47 75462.5 48 80979.0 49 84426.5 50 87874.0 51 86076.0 52 84278.0 53 84011.0 54 83744.0 55 84538.5 56 85333.0 57 82980.0 58 80627.0 59 73781.5 60 66936.0 61 59098.5 62 51261.0 63 44525.0 64 37789.0 65 32114.0 66 26439.0 67 22705.5 68 18972.0 69 17064.0 70 15156.0 71 11906.0 72 8656.0 73 7350.5 74 6045.0 75 4731.0 76 3417.0 77 3029.5 78 2642.0 79 2227.0 80 1812.0 81 1433.0 82 1054.0 83 862.0 84 670.0 85 500.0 86 330.0 87 227.5 88 125.0 89 100.5 90 76.0 91 57.0 92 38.0 93 30.5 94 23.0 95 29.0 96 35.0 97 25.0 98 15.0 99 12.5 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00909928659808897 2 8.028782292431445E-4 3 4.4604346069063584E-4 4 0.0 5 0.0 6 1.7841738427625434E-4 7 0.0 8 0.0 9 6.244608449668902E-4 10 5.35252152828763E-4 11 0.0 12 0.0 13 2.676260764143815E-4 14 2.676260764143815E-4 15 0.00472806068332074 16 8.028782292431445E-4 17 0.0 18 4.4604346069063584E-4 19 8.920869213812717E-5 20 6.244608449668902E-4 21 0.0 22 2.676260764143815E-4 23 9.81295613519399E-4 24 4.4604346069063584E-4 25 0.0013381303820719076 26 0.00472806068332074 27 0.004460434606906359 28 0.0030330955326963237 29 0.0013381303820719076 30 0.0022302173034531793 31 0.004817269375458867 32 0.0024086346877294335 33 0.003211512916972578 34 0.002141008611315052 35 0.0020517999191769247 36 0.007047486678912047 37 0.0024086346877294335 38 0.006423025833945156 39 0.0031223042248344508 40 0.0015165477663481618 41 0.002141008611315052 42 9.81295613519399E-4 43 9.81295613519399E-4 44 8.920869213812717E-4 45 9.81295613519399E-4 46 2.676260764143815E-4 47 0.001605756458486289 48 0.0025870520720056877 49 8.920869213812717E-5 50 0.0012489216899337803 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1120967.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.44980166262637 #Duplication Level Percentage of deduplicated Percentage of total 1 81.41354284802614 49.214325178149124 2 11.3976426046224 13.779704697418484 3 3.131374917725082 5.678729781234125 4 1.336886226203681 3.2325802887803823 5 0.7095565145792441 2.144627528736988 6 0.4398639407741067 1.5953812787001587 7 0.30052466205234435 1.2716659351054422 8 0.20230096497871777 0.9783242567297129 9 0.1634611021763062 0.8893072085500809 >10 0.7799212320162482 8.331560037372896 >50 0.05676185904117837 2.375937052827284 >100 0.06133196765993889 7.5308122575048015 >500 0.005940139256316568 2.397848071943594 >1k 8.910208884474852E-4 0.5791964269469533 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1190 0.10615834364437132 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.920869213812717E-5 2 0.0 0.0 0.0 0.0 8.920869213812717E-5 3 0.0 0.0 0.0 0.0 8.920869213812717E-5 4 0.0 0.0 0.0 0.0 8.920869213812717E-5 5 0.0 0.0 0.0 0.0 8.920869213812717E-5 6 0.0 0.0 0.0 0.0 8.920869213812717E-5 7 0.0 0.0 0.0 0.0 8.920869213812717E-5 8 0.0 0.0 0.0 8.920869213812717E-5 8.920869213812717E-5 9 0.0 0.0 0.0 1.7841738427625434E-4 8.920869213812717E-5 10 0.0 0.0 0.0 1.7841738427625434E-4 1.7841738427625434E-4 11 0.0 0.0 0.0 1.7841738427625434E-4 1.7841738427625434E-4 12 0.0 0.0 0.0 1.7841738427625434E-4 3.568347685525087E-4 13 0.0 0.0 0.0 1.7841738427625434E-4 5.35252152828763E-4 14 0.0 0.0 0.0 1.7841738427625434E-4 5.35252152828763E-4 15 0.0 0.0 0.0 1.7841738427625434E-4 6.244608449668902E-4 16 0.0 0.0 0.0 1.7841738427625434E-4 8.920869213812717E-4 17 0.0 0.0 0.0 3.568347685525087E-4 8.920869213812717E-4 18 0.0 0.0 0.0 3.568347685525087E-4 9.812956135193988E-4 19 0.0 0.0 0.0 3.568347685525087E-4 9.812956135193988E-4 20 0.0 0.0 0.0 4.4604346069063584E-4 9.812956135193988E-4 21 0.0 0.0 0.0 7.136695371050174E-4 0.001070504305657526 22 0.0 0.0 0.0 8.028782292431446E-4 0.001070504305657526 23 0.0 0.0 0.0 0.0011597129977956532 0.001070504305657526 24 0.0 0.0 0.0 0.0016949651506244163 0.001070504305657526 25 0.0 0.0 0.0 0.0018733825349006707 0.001070504305657526 26 0.0 0.0 0.0 0.0024086346877294335 0.0011597129977956532 27 0.0 0.0 0.0 0.0027654694562819424 0.0011597129977956532 28 0.0 0.0 0.0 0.004817269375458867 0.0011597129977956532 29 0.0 0.0 0.0 0.008117990984569572 0.0011597129977956532 30 0.0 0.0 0.0 0.014630225510652855 0.0011597129977956532 31 0.0 0.0 0.0 0.032204337861863906 0.0012489216899337803 32 0.0 0.0 0.0 0.05084895451873249 0.0012489216899337803 33 0.0 0.0 0.0 0.06824464948566729 0.0012489216899337803 34 0.0 0.0 0.0 0.08804897914033152 0.0013381303820719076 35 0.0 0.0 0.0 0.11133244778838271 0.0013381303820719076 36 0.0 0.0 0.0 0.1450533334165948 0.0014273390742100347 37 0.0 0.0 0.0 0.1881411317193102 0.0014273390742100347 38 0.0 0.0 0.0 0.2528174335194524 0.0014273390742100347 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1810 0.0 24.92041 1 TAGGACG 460 0.0 20.564259 4 GATATAC 315 0.0 20.25664 1 TCGACGC 55 0.004482307 20.00085 14 GTATTAG 215 0.0 19.444424 1 CGGATTT 70 8.120493E-4 18.857946 35 TTAGGAC 335 0.0 18.387201 3 CGTCGTA 300 0.0 18.333296 10 TTCGAGT 60 0.0074118595 18.333296 16 AGGACGT 525 0.0 18.018208 5 ATTACAC 175 1.9099389E-10 17.59918 3 ACTGTTC 350 0.0 17.59918 8 AACGCAG 2590 0.0 17.327377 6 ATCGTTT 280 0.0 17.284908 29 TAATAGT 115 4.274223E-6 17.216589 4 ATATAGG 90 2.2159795E-4 17.110313 3 TACCGTC 360 0.0 17.110313 7 CCGTCGT 310 0.0 17.032225 9 GGTATCA 845 0.0 16.925308 1 GTAGGAC 585 0.0 16.922287 3 >>END_MODULE