##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064132_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 874975 Sequences flagged as poor quality 0 Sequence length 50 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.3748827109346 32.0 32.0 32.0 32.0 32.0 2 31.4964073259236 32.0 32.0 32.0 32.0 32.0 3 31.537055344438414 32.0 32.0 32.0 32.0 32.0 4 31.59808794536987 32.0 32.0 32.0 32.0 32.0 5 31.578705677305067 32.0 32.0 32.0 32.0 32.0 6 35.16274064973285 36.0 36.0 36.0 36.0 36.0 7 35.17488613960399 36.0 36.0 36.0 36.0 36.0 8 35.128041372610646 36.0 36.0 36.0 36.0 36.0 9 35.22225549301409 36.0 36.0 36.0 36.0 36.0 10 35.117470784879565 36.0 36.0 36.0 36.0 36.0 11 35.21970113431812 36.0 36.0 36.0 36.0 36.0 12 35.15910283150947 36.0 36.0 36.0 36.0 36.0 13 35.181422326352184 36.0 36.0 36.0 36.0 36.0 14 35.14996085602446 36.0 36.0 36.0 36.0 36.0 15 35.12024114974714 36.0 36.0 36.0 36.0 36.0 16 35.141007457355926 36.0 36.0 36.0 36.0 36.0 17 35.13416954770136 36.0 36.0 36.0 36.0 36.0 18 35.12966999057116 36.0 36.0 36.0 36.0 36.0 19 35.10385096717049 36.0 36.0 36.0 36.0 36.0 20 35.10300180005143 36.0 36.0 36.0 36.0 36.0 21 35.09047801365753 36.0 36.0 36.0 36.0 36.0 22 35.084322409211694 36.0 36.0 36.0 36.0 36.0 23 35.05042315494728 36.0 36.0 36.0 36.0 36.0 24 35.02772079202263 36.0 36.0 36.0 36.0 36.0 25 35.002350924312125 36.0 36.0 36.0 36.0 36.0 26 34.963360096002745 36.0 36.0 36.0 36.0 36.0 27 34.93253978685105 36.0 36.0 36.0 36.0 36.0 28 34.92520129146547 36.0 36.0 36.0 36.0 36.0 29 34.90043944112689 36.0 36.0 36.0 36.0 36.0 30 34.866620189148264 36.0 36.0 36.0 36.0 36.0 31 34.86048058515958 36.0 36.0 36.0 36.0 36.0 32 34.84286179605132 36.0 36.0 36.0 32.0 36.0 33 34.83545929883711 36.0 36.0 36.0 32.0 36.0 34 34.82292751221463 36.0 36.0 36.0 32.0 36.0 35 34.79417126203606 36.0 36.0 36.0 32.0 36.0 36 34.76599102831509 36.0 36.0 36.0 32.0 36.0 37 34.75458498814252 36.0 36.0 36.0 32.0 36.0 38 34.71921254892997 36.0 36.0 36.0 32.0 36.0 39 34.6763701820052 36.0 36.0 36.0 32.0 36.0 40 34.69104831566616 36.0 36.0 36.0 32.0 36.0 41 34.671724334981 36.0 36.0 36.0 32.0 36.0 42 34.65607131632332 36.0 36.0 36.0 32.0 36.0 43 34.64255435869596 36.0 36.0 36.0 32.0 36.0 44 34.58184290979742 36.0 36.0 36.0 32.0 36.0 45 34.557522214920425 36.0 36.0 36.0 32.0 36.0 46 34.51673133518101 36.0 36.0 36.0 32.0 36.0 47 34.516134746707046 36.0 36.0 36.0 32.0 36.0 48 34.479764564701846 36.0 36.0 36.0 32.0 36.0 49 34.44067544786994 36.0 36.0 36.0 32.0 36.0 50 33.906293322666365 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 0.0 18 0.0 19 3.0 20 6.0 21 14.0 22 56.0 23 198.0 24 528.0 25 1217.0 26 2661.0 27 4929.0 28 8724.0 29 13502.0 30 19815.0 31 28437.0 32 40336.0 33 64345.0 34 133552.0 35 556651.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.42086999458225 21.14956875170019 12.792404177839348 25.637157075878214 2 13.516333684202106 22.178792211399006 41.58080667816419 22.724067426234697 3 17.037459484417788 26.52839176567936 31.064194054209736 25.36995469569312 4 11.093002657218777 18.350467156204463 39.889025400725735 30.667504785851023 5 11.853138661104603 39.2212348924255 36.10434583845253 12.821280608017371 6 29.94438679180591 39.88527632884252 18.351672967820683 11.818663911530884 7 26.888913270565755 32.916863815381944 22.894508865406284 17.299714048646017 8 24.20857738792537 38.38703962970371 20.8441384039544 16.560244578416526 9 26.06941053844255 15.29941666438087 21.03928372237613 37.59188907480045 10 14.460268605643895 29.467874641556275 34.79964295633072 21.27221379646911 11 33.4768804558764 23.092914760895752 25.6215613263937 17.808643456834147 12 22.94479607394048 25.93939934215188 32.297302548418585 18.818502035489054 13 28.224835908097106 23.122814917591178 26.715636132562715 21.936713041749005 14 20.51331869669121 22.868248505953897 28.25252893517857 28.365903862176317 15 22.535462391178378 32.19062771089708 23.648337430752473 21.62557246717207 16 21.759906373611805 29.397565851054953 27.737846113053404 21.104681662279834 17 20.47681362324638 29.732963798965685 28.282865224720705 21.50735735306723 18 20.504656148996766 28.667545932898424 30.668067092432672 20.15973082567214 19 23.205718112766778 27.12183447736733 28.043004706425563 21.62944270344033 20 23.70478564432421 28.163333413335984 28.00344239980525 20.128438542534553 21 23.576102174347838 27.138146804194406 26.78807965941884 22.497671362038915 22 22.857795937026772 29.223463527529358 27.544786993914112 20.373953541529758 23 21.81364761602165 29.254736755485354 27.990001897216576 20.941613731276416 24 22.657436646471712 27.668802737462155 28.546660403601948 21.127100212464185 25 22.35942355629058 28.20512234399412 28.246838965839228 21.18861513387607 26 21.012820556780426 29.135249616251947 28.73567159624333 21.116258230724302 27 21.467816505792054 29.024636960584292 28.274498374109193 21.23304815951446 28 20.957623234587174 29.117639327174416 27.817660014378177 22.107077423860233 29 21.843162175321336 27.77041221018079 27.69680733122881 22.689618283269063 30 21.666558086427585 28.09050791549943 27.997128909888687 22.245805088184298 31 22.79121813613992 27.886235361083745 27.664837111695817 21.65770939108052 32 21.127626623692045 29.03381394046415 28.357992308000025 21.480567127843784 33 21.095841248288426 29.098460898407406 28.834095683520662 20.971602169783502 34 21.489278048401363 28.114806373966495 29.187458711171356 21.208456866460786 35 21.56680995317377 28.984829764885927 28.050819659015445 21.39754062292485 36 21.244762246570456 28.564929854680205 28.700717112166217 21.489590786583122 37 21.569039808899 28.249688546512292 27.491456459373893 22.68981518521482 38 21.679435905583453 29.14095388100662 27.755978186947143 21.423632026462787 39 22.191133878750886 27.509869406098343 28.03551386060078 22.263482854549984 40 22.94272547728769 27.61113854143808 28.348900043888527 21.097235937385708 41 22.891029223684797 27.111770965127935 28.93372238813817 21.063477423049097 42 21.597910749695696 28.629129498088474 28.770165322788028 21.002794429427798 43 20.66485021098011 28.843472417150878 28.898788978746552 21.592888393122458 44 20.453002530395604 28.013902318043527 28.95908622317312 22.574008928387748 45 20.959490904768654 28.22676132960899 28.49568667968054 22.31806108594182 46 21.677651918199782 27.6179166842865 28.22731527462367 22.47711612289005 47 22.109580993678506 27.72875281015737 28.509367953176806 21.65229824298732 48 20.92416181403615 28.14316164831334 28.18350658033842 22.74916995731209 49 21.69627162655463 26.97316238573842 28.830605989261297 22.499959998445654 50 20.867053806846688 28.56406499474835 28.036728410229916 22.53215278817504 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1.0 1 2.5 2 4.0 3 18.5 4 33.0 5 35.5 6 38.0 7 44.5 8 51.0 9 90.5 10 130.0 11 210.5 12 291.0 13 538.0 14 785.0 15 1084.0 16 1383.0 17 1770.5 18 2158.0 19 2476.0 20 2794.0 21 3480.5 22 4167.0 23 5260.5 24 6354.0 25 8599.0 26 10844.0 27 14586.5 28 18329.0 29 22269.5 30 26210.0 31 29958.0 32 33706.0 33 40264.5 34 46823.0 35 55209.0 36 63595.0 37 67661.5 38 71728.0 39 70529.0 40 69330.0 41 68452.5 42 67575.0 43 66111.0 44 64647.0 45 63651.5 46 62656.0 47 61150.5 48 59645.0 49 57192.5 50 54740.0 51 52435.0 52 50130.0 53 45979.0 54 41828.0 55 38053.0 56 34278.0 57 30198.5 58 26119.0 59 22728.5 60 19338.0 61 16338.0 62 13338.0 63 10949.5 64 8561.0 65 6941.5 66 5322.0 67 4231.5 68 3141.0 69 2457.5 70 1774.0 71 1465.5 72 1157.0 73 947.0 74 737.0 75 609.5 76 482.0 77 391.5 78 301.0 79 248.0 80 195.0 81 152.5 82 110.0 83 72.5 84 35.0 85 46.0 86 57.0 87 39.0 88 21.0 89 18.0 90 15.0 91 12.5 92 10.0 93 8.0 94 6.0 95 3.5 96 1.0 97 1.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008343095517014771 2 4.571559187405354E-4 3 3.428669390554016E-4 4 0.0 5 0.0 6 3.428669390554016E-4 7 1.1428897968513385E-4 8 0.0 9 8.000228577959371E-4 10 0.0013714677562216063 11 1.1428897968513385E-4 12 1.1428897968513385E-4 13 9.143118374810708E-4 14 2.285779593702677E-4 15 0.003885825309294551 16 9.143118374810708E-4 17 0.0 18 3.428669390554016E-4 19 1.1428897968513385E-4 20 4.571559187405354E-4 21 0.0 22 0.0 23 0.0010286008171662049 24 4.571559187405354E-4 25 0.0027429355124432126 26 0.005943026943626961 27 0.00800022857795937 28 0.004342981228035087 29 0.0037715363296094177 30 0.005257293065516157 31 0.009257407354495843 32 0.0045715591874053545 33 0.005600160004571559 34 0.004685848167090488 35 0.004342981228035087 36 0.008800251435755309 37 0.005143004085831024 38 0.009828852252921513 39 0.005600160004571559 40 0.00354295837023915 41 0.003885825309294551 42 0.0022857795937026772 43 0.0012571787765364723 44 0.0014857567359067402 45 0.0012571787765364723 46 0.0016000457155918742 47 0.0027429355124432126 48 0.0022857795937026772 49 0.0010286008171662049 50 0.0013714677562216063 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 874975.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.0677713911363 #Duplication Level Percentage of deduplicated Percentage of total 1 63.01946047321463 28.40146637799587 2 15.822511160720476 14.26170631650106 3 7.6992136560167985 10.409592028226394 4 4.223442753940345 7.613646100725383 5 2.6381800507829563 5.944844770867131 6 1.750906522969508 4.7345672942663475 7 1.2024032686394304 3.7932744941697822 8 0.8221780289571354 2.9642985161484177 9 0.5948822645244308 2.4129016112005663 >10 2.1432593407460345 14.650105503204621 >50 0.04866084583651854 1.5090476576100926 >100 0.03362785140597298 2.8108531964150005 >500 0.001019025796618242 0.37383130417940447 >1k 2.547564491545605E-4 0.11986482848995647 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 1044 0.11931769479127975 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 961 0.10983170947741364 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.1428897968513387E-4 0.0 5 0.0 0.0 0.0 1.1428897968513387E-4 0.0 6 0.0 0.0 0.0 1.1428897968513387E-4 0.0 7 0.0 0.0 0.0 2.2857795937026773E-4 0.0 8 0.0 0.0 0.0 2.2857795937026773E-4 0.0 9 0.0 0.0 0.0 4.5715591874053547E-4 0.0 10 0.0 0.0 0.0 4.5715591874053547E-4 0.0 11 0.0 0.0 0.0 4.5715591874053547E-4 0.0 12 0.0 0.0 0.0 4.5715591874053547E-4 0.0 13 0.0 0.0 0.0 5.714448984256693E-4 0.0 14 0.0 0.0 0.0 5.714448984256693E-4 0.0 15 0.0 0.0 0.0 8.00022857795937E-4 0.0 16 0.0 0.0 0.0 8.00022857795937E-4 0.0 17 0.0 0.0 0.0 9.143118374810709E-4 0.0 18 0.0 0.0 0.0 9.143118374810709E-4 0.0 19 0.0 0.0 0.0 9.143118374810709E-4 0.0 20 0.0 0.0 0.0 0.0012571787765364726 0.0 21 0.0 0.0 0.0 0.0012571787765364726 0.0 22 0.0 0.0 0.0 0.0012571787765364726 0.0 23 0.0 0.0 0.0 0.0014857567359067402 0.0 24 0.0 0.0 0.0 0.0019429126546472756 0.0 25 0.0 0.0 0.0 0.0021714906140175433 0.0 26 0.0 0.0 0.0 0.0029715134718134805 0.0 27 0.0 0.0 0.0 0.003428669390554016 0.0 28 0.0 0.0 0.0 0.006057315923312095 0.0 29 0.0 0.0 0.0 0.012571787765364724 0.0 30 0.0 0.0 0.0 0.029486556758764534 0.0 31 0.0 0.0 0.0 0.07463070373439241 0.0 32 0.0 0.0 0.0 0.13531815194719848 0.0 33 0.0 0.0 0.0 0.19051972913511814 0.0 34 0.0 0.0 0.0 0.25395011286036745 0.0 35 0.0 0.0 0.0 0.3274379267979085 0.0 36 0.0 0.0 0.0 0.43326952198634244 0.0 37 0.0 0.0 0.0 0.5973884968141947 0.0 38 0.0 0.0 0.0 0.8220806308751679 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGGGCC 30 0.0057454337 29.331999 13 ATCGGGC 30 0.0057454337 29.331999 12 ATCGGAT 30 0.005747039 29.330322 17 CACCGTG 55 4.9629525E-6 27.997126 7 GTATCAA 1160 0.0 26.934427 1 GGTATCA 535 0.0 24.264738 1 TATACGT 85 6.1156807E-6 20.703758 4 GGCGGTC 55 0.00447937 20.00252 35 ATATCGC 55 0.0044838176 19.999092 15 TAGGACC 470 0.0 19.657557 4 TAGGACG 1270 0.0 18.879951 4 GACCGTT 70 8.126477E-4 18.855207 7 TATCAAC 1695 0.0 18.55963 2 TTAGGAC 895 0.0 18.433863 3 CATGCGA 60 0.007412451 18.332499 10 ACACGCC 60 0.0074148946 18.331451 8 GTCTTAC 110 2.791272E-6 18.002268 1 AGGACGT 1365 0.0 17.72712 5 TGTAGGA 1240 0.0 17.563719 2 GTAGGAC 1265 0.0 17.563416 3 >>END_MODULE