##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064131_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1146123 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.331857924498504 32.0 32.0 32.0 32.0 32.0 2 31.400482321705436 32.0 32.0 32.0 32.0 32.0 3 31.477811718288525 32.0 32.0 32.0 32.0 32.0 4 31.55875940016909 32.0 32.0 32.0 32.0 32.0 5 31.510972208043988 32.0 32.0 32.0 32.0 32.0 6 35.09879044395758 36.0 36.0 36.0 36.0 36.0 7 35.11415528699799 36.0 36.0 36.0 36.0 36.0 8 35.05956341509594 36.0 36.0 36.0 36.0 36.0 9 35.16571607061371 36.0 36.0 36.0 36.0 36.0 10 35.02544316796714 36.0 36.0 36.0 36.0 36.0 11 35.16693932501136 36.0 36.0 36.0 36.0 36.0 12 35.07482791986549 36.0 36.0 36.0 36.0 36.0 13 35.11359950022816 36.0 36.0 36.0 36.0 36.0 14 35.05246731808017 36.0 36.0 36.0 36.0 36.0 15 35.022742759721254 36.0 36.0 36.0 36.0 36.0 16 35.04642259164156 36.0 36.0 36.0 36.0 36.0 17 35.007696381627454 36.0 36.0 36.0 36.0 36.0 18 35.004374748609 36.0 36.0 36.0 36.0 36.0 19 34.997246368845225 36.0 36.0 36.0 36.0 36.0 20 34.98949763681559 36.0 36.0 36.0 36.0 36.0 21 34.99082908204442 36.0 36.0 36.0 36.0 36.0 22 34.97593364761025 36.0 36.0 36.0 36.0 36.0 23 34.92543993969234 36.0 36.0 36.0 32.0 36.0 24 34.89236757311388 36.0 36.0 36.0 32.0 36.0 25 34.86459917478316 36.0 36.0 36.0 32.0 36.0 26 34.80128310835748 36.0 36.0 36.0 32.0 36.0 27 34.80248280507415 36.0 36.0 36.0 32.0 36.0 28 34.77437151160914 36.0 36.0 36.0 32.0 36.0 29 34.74839087951293 36.0 36.0 36.0 32.0 36.0 30 34.724214591278596 36.0 36.0 36.0 32.0 36.0 31 34.723810620675096 36.0 36.0 36.0 32.0 36.0 32 34.68838423101185 36.0 36.0 36.0 32.0 36.0 33 34.6648361476037 36.0 36.0 36.0 32.0 36.0 34 34.65715547109691 36.0 36.0 36.0 32.0 36.0 35 34.61329106910864 36.0 36.0 36.0 32.0 36.0 36 34.600568176365016 36.0 36.0 36.0 32.0 36.0 37 34.585981609303715 36.0 36.0 36.0 32.0 36.0 38 34.54423652609711 36.0 36.0 36.0 32.0 36.0 39 34.55074629860844 36.0 36.0 36.0 32.0 36.0 40 34.52182619142972 36.0 36.0 36.0 32.0 36.0 41 34.5147728472424 36.0 36.0 36.0 32.0 36.0 42 34.44693806860171 36.0 36.0 36.0 32.0 36.0 43 34.444626798345375 36.0 36.0 36.0 32.0 36.0 44 34.38637039829059 36.0 36.0 36.0 32.0 36.0 45 34.35584487877828 36.0 36.0 36.0 32.0 36.0 46 34.33387777751602 36.0 36.0 36.0 32.0 36.0 47 34.305530034734495 36.0 36.0 36.0 32.0 36.0 48 34.26200067532019 36.0 36.0 36.0 32.0 36.0 49 34.24585842880738 36.0 36.0 36.0 32.0 36.0 50 33.64259333422329 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 5.0 20 13.0 21 37.0 22 137.0 23 410.0 24 1067.0 25 2280.0 26 4520.0 27 8119.0 28 13233.0 29 20148.0 30 28693.0 31 40498.0 32 57940.0 33 93317.0 34 195414.0 35 680290.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.83619975044283 17.714108705705783 11.636257340558274 26.813434203293106 2 16.222705785247992 20.357082404839975 36.57603640799147 26.844175401920563 3 18.304889540362264 24.072784699682405 28.593515513209788 29.02881024674554 4 12.650125684590572 15.886863800831149 35.416704838834924 36.046305675743355 5 14.551492291839532 36.570682204266035 33.272694117472554 15.605131386421874 6 34.64133835664964 35.232025909981665 16.55661439183612 13.570021341532575 7 30.499458172864667 30.20629566485941 20.595625945579965 18.698620216695954 8 28.297050142087716 32.838622032713765 19.13564250957358 19.72868531562494 9 27.83058913039116 13.814257407428412 17.955297601545396 40.39985586063503 10 16.078721868998727 26.539837764405018 31.376891069015127 26.004549297581125 11 37.69167881632251 20.624400696958354 22.400475341651813 19.283445145067326 12 25.171491342108432 23.225188941491396 28.53151758713296 23.071802129267216 13 30.05661725635341 19.14516580767932 24.84083213144906 25.957384804518213 14 23.966076850591563 19.186821624262727 24.777510208355146 32.069591316790564 15 25.492488659040003 26.878533279467952 21.852910868212767 25.776067193279278 16 26.084923192899858 25.26554857353257 23.361468888892766 25.288059344674807 17 24.56350670914029 25.537136939054534 24.767411525639048 25.131944826166126 18 25.273052163913313 24.564050123983744 25.632177489577863 24.53072022252508 19 26.19736276123941 24.336305963670565 24.98414219067238 24.48218908441764 20 26.460287406967918 23.843871879662508 24.489097905087647 25.20674280828193 21 27.22918918824594 23.75259897934166 23.959470318630725 25.05874151378168 22 26.455735078813596 23.862206641177817 24.342085746543564 25.339972533465023 23 24.970792634247 23.81558569602527 24.993652469429335 26.219969200298397 24 25.449561039962727 24.20946185296802 24.799627961518798 25.541349145550456 25 25.427229244066428 23.91881728217111 24.85014475100907 25.80380872275339 26 25.248437476822826 24.73642373935813 25.03789058716667 24.977248196652365 27 25.693149523095677 24.355321861336066 24.436645588231446 25.514883027336815 28 25.12505682418053 24.27712225771522 25.036930263969587 25.56089065413466 29 25.203757816787668 24.359845771409077 24.915473553147176 25.520922858656075 30 25.082563540115192 24.521611361092134 24.979517261778554 25.416307837014116 31 25.723255787573308 24.200001221605312 24.25287928009054 25.823863710730844 32 25.488904381270817 24.44046373604704 24.15575486243143 25.914877020250714 33 25.126454653889006 24.1858431866311 24.709723636484206 25.97797852299568 34 25.651350691051235 24.152327935222672 24.871649448555075 25.324671925171018 35 26.065560467922595 24.189350372179426 24.822722882294276 24.922366277603707 36 25.226477491863214 24.550578955175695 24.564889226285523 25.65805432667557 37 25.942601065890457 24.341322276552155 24.340886008355408 25.37519064920198 38 25.344715353511027 24.389669272210384 24.726225940604774 25.539389433673815 39 25.80114879244167 24.16844302239037 24.407345779893603 25.62306240527436 40 26.045966601314202 24.254314440451168 24.70000253033567 24.999716427898957 41 25.224263079504432 24.521698614503087 25.00150512133896 25.25253318465352 42 26.151420549233666 24.676600593662364 24.506721018823736 24.66525783828023 43 25.472492437416182 23.976902599504584 24.7823275918482 25.76827737123103 44 25.26537592377695 24.424444425055185 24.452888466203067 25.857291184964794 45 25.346542082821095 24.60455331909967 24.54208107605821 25.506823522021026 46 25.363816656821797 24.252495172814548 24.722344131861345 25.66134403850231 47 25.53878370124771 24.222929936305732 24.86528226158276 25.3730041008638 48 25.993520640851024 24.70977688702828 24.108259219737178 25.188443252383514 49 25.29900882979095 24.80569224863016 24.23891041077723 25.65638851080166 50 25.371408827607144 24.98470913324998 24.282768916394517 25.361113122748357 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 15.0 1 17.5 2 20.0 3 57.5 4 95.0 5 120.0 6 145.0 7 143.0 8 141.0 9 194.0 10 247.0 11 339.0 12 431.0 13 845.0 14 1259.0 15 1712.5 16 2166.0 17 2242.0 18 2318.0 19 2313.5 20 2309.0 21 2498.5 22 2688.0 23 3142.0 24 3596.0 25 4377.5 26 5159.0 27 6573.5 28 7988.0 29 9581.5 30 11175.0 31 13115.5 32 15056.0 33 17871.0 34 20686.0 35 24697.5 36 28709.0 37 33711.0 38 38713.0 39 42560.5 40 46408.0 41 50880.5 42 55353.0 43 58003.0 44 60653.0 45 66986.0 46 73319.0 47 78436.0 48 83553.0 49 86981.0 50 90409.0 51 89125.5 52 87842.0 53 87421.5 54 87001.0 55 87188.5 56 87376.0 57 85120.5 58 82865.0 59 76021.5 60 69178.0 61 60911.5 62 52645.0 63 45627.5 64 38610.0 65 32823.5 66 27037.0 67 23434.5 68 19832.0 69 17664.5 70 15497.0 71 12188.5 72 8880.0 73 7585.5 74 6291.0 75 5021.5 76 3752.0 77 3251.0 78 2750.0 79 2224.5 80 1699.0 81 1364.0 82 1029.0 83 827.5 84 626.0 85 456.0 86 286.0 87 213.0 88 140.0 89 108.0 90 76.0 91 53.5 92 31.0 93 31.5 94 32.0 95 27.5 96 23.0 97 14.5 98 6.0 99 7.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008114312338204538 2 8.72506703032746E-5 3 2.617520109098238E-4 4 0.0 5 0.0 6 8.72506703032746E-5 7 8.72506703032746E-5 8 0.0 9 8.725067030327461E-4 10 0.0010470080436392952 11 0.0 12 8.72506703032746E-5 13 5.235040218196476E-4 14 2.617520109098238E-4 15 0.004886037536983378 16 4.3625335151637303E-4 17 0.0 18 4.3625335151637303E-4 19 0.0 20 0.00113425871394257 21 0.0 22 8.72506703032746E-5 23 6.980053624261968E-4 24 4.3625335151637303E-4 25 0.0014832613951556682 26 0.005235040218196476 27 0.007503557646081616 28 0.0038390294933440825 29 0.0027920214497047873 30 0.0031410241309178855 31 0.007852560327294714 32 0.0034900268121309842 33 0.005235040218196476 34 0.003751778823040808 35 0.0031410241309178855 36 0.008114312338204538 37 0.0034027761418277095 38 0.009161320381843833 39 0.00436253351516373 40 0.002617520109098238 41 0.0031410241309178855 42 0.0014832613951556682 43 0.0017450134060654921 44 0.00113425871394257 45 0.0012215093842458445 46 8.725067030327461E-4 47 0.002006765416975316 48 0.0019195147466720412 49 2.617520109098238E-4 50 0.0012215093842458445 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1146123.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.48581640636567 #Duplication Level Percentage of deduplicated Percentage of total 1 82.00573455818902 51.24195273872155 2 11.206305925923782 14.004703493616821 3 2.9526767985776456 5.535012610297748 4 1.2424994603935156 3.105543726686305 5 0.6611744268434971 2.0657011924163404 6 0.4115606397454061 1.543002154513071 7 0.28967406235988535 1.2670364194814143 8 0.19907581947150735 0.9951532085154723 9 0.14888241174193903 0.8372735141619368 >10 0.7693952974588703 8.45042848448899 >50 0.05435482637561118 2.3383859999168775 >100 0.05402316203182607 6.645606034422171 >500 0.0046426108875949985 1.97020042276128 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.72506703032746E-5 2 0.0 0.0 0.0 0.0 8.72506703032746E-5 3 0.0 0.0 0.0 0.0 8.72506703032746E-5 4 0.0 0.0 0.0 0.0 8.72506703032746E-5 5 0.0 0.0 0.0 0.0 8.72506703032746E-5 6 0.0 0.0 0.0 0.0 8.72506703032746E-5 7 0.0 0.0 0.0 0.0 8.72506703032746E-5 8 0.0 0.0 0.0 0.0 8.72506703032746E-5 9 0.0 0.0 0.0 0.0 8.72506703032746E-5 10 0.0 0.0 0.0 0.0 8.72506703032746E-5 11 0.0 0.0 0.0 0.0 8.72506703032746E-5 12 0.0 0.0 0.0 0.0 8.72506703032746E-5 13 0.0 0.0 0.0 0.0 8.72506703032746E-5 14 0.0 0.0 0.0 0.0 1.745013406065492E-4 15 0.0 0.0 0.0 0.0 3.490026812130984E-4 16 0.0 0.0 0.0 0.0 4.3625335151637303E-4 17 0.0 0.0 0.0 0.0 4.3625335151637303E-4 18 0.0 0.0 0.0 0.0 4.3625335151637303E-4 19 0.0 0.0 0.0 8.72506703032746E-5 4.3625335151637303E-4 20 0.0 0.0 0.0 8.72506703032746E-5 6.980053624261968E-4 21 0.0 0.0 0.0 8.72506703032746E-5 6.980053624261968E-4 22 0.0 0.0 0.0 2.617520109098238E-4 6.980053624261968E-4 23 0.0 0.0 0.0 6.107546921229223E-4 6.980053624261968E-4 24 0.0 0.0 0.0 0.0010470080436392952 6.980053624261968E-4 25 0.0 0.0 0.0 0.0010470080436392952 6.980053624261968E-4 26 0.0 0.0 0.0 0.001308760054549119 7.852560327294715E-4 27 0.0 0.0 0.0 0.001570512065458943 7.852560327294715E-4 28 0.0 0.0 0.0 0.002704770779401513 7.852560327294715E-4 29 0.0 0.0 0.0 0.005409541558803026 7.852560327294715E-4 30 0.0 0.0 0.0 0.013523853897007564 7.852560327294715E-4 31 0.0 0.0 0.0 0.0326317506934247 7.852560327294715E-4 32 0.0 0.0 0.0 0.05313565821469424 7.852560327294715E-4 33 0.0 0.0 0.0 0.07137104830807862 7.852560327294715E-4 34 0.0 0.0 0.0 0.093096465213594 7.852560327294715E-4 35 0.0 0.0 0.0 0.11979517032639603 7.852560327294715E-4 36 0.0 0.0 0.0 0.15740020922710737 7.852560327294715E-4 37 0.0 0.0 0.0 0.21289163553999005 7.852560327294715E-4 38 0.0 0.0 0.0 0.2858331959135276 7.852560327294715E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGGC 75 2.0608222E-6 23.470974 36 GTATCAA 1640 0.0 22.938227 1 GGTATCA 785 0.0 20.177643 1 ACCGTAT 55 0.0044866367 19.99756 8 ATAGACC 110 1.2677083E-7 19.996689 3 TTAACGG 80 8.975399E-5 19.25353 35 AGGATCG 80 8.999491E-5 19.24681 5 GTATAGT 130 3.5881385E-8 18.614738 1 AATCCCG 60 0.007417089 18.331097 19 GTTCGCG 60 0.0074189557 18.330297 16 GTAGGAC 330 0.0 17.997019 3 TTAGGAC 185 2.1827873E-11 17.834885 3 GTACTAT 100 2.4835716E-5 17.599388 1 TATTAGG 100 2.4863668E-5 17.597086 2 AACGCAG 2190 0.0 17.376118 6 TATATGG 115 4.27924E-6 17.21454 2 TCCTATA 115 4.27924E-6 17.21454 2 CTAGTAC 115 4.27924E-6 17.21454 3 GTTTAAT 195 4.9112714E-11 16.92249 1 TAGGACG 170 2.4720066E-9 16.820744 4 >>END_MODULE