##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064130_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 935512 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.323712576642524 32.0 32.0 32.0 32.0 32.0 2 31.416559060706863 32.0 32.0 32.0 32.0 32.0 3 31.4824417003737 32.0 32.0 32.0 32.0 32.0 4 31.561064956943362 32.0 32.0 32.0 32.0 32.0 5 31.50588661609899 32.0 32.0 32.0 32.0 32.0 6 35.10048828876594 36.0 36.0 36.0 36.0 36.0 7 35.125407263616076 36.0 36.0 36.0 36.0 36.0 8 35.06939194793867 36.0 36.0 36.0 36.0 36.0 9 35.17335961484193 36.0 36.0 36.0 36.0 36.0 10 35.03021767759259 36.0 36.0 36.0 36.0 36.0 11 35.17287645695619 36.0 36.0 36.0 36.0 36.0 12 35.077641975730934 36.0 36.0 36.0 36.0 36.0 13 35.1203148650151 36.0 36.0 36.0 36.0 36.0 14 35.057458375734356 36.0 36.0 36.0 36.0 36.0 15 35.04364454972251 36.0 36.0 36.0 36.0 36.0 16 35.05269841541316 36.0 36.0 36.0 36.0 36.0 17 35.0062137097119 36.0 36.0 36.0 36.0 36.0 18 35.01309229598338 36.0 36.0 36.0 36.0 36.0 19 35.00503895193221 36.0 36.0 36.0 36.0 36.0 20 34.994794294461215 36.0 36.0 36.0 36.0 36.0 21 35.00316831852504 36.0 36.0 36.0 36.0 36.0 22 34.973641171893036 36.0 36.0 36.0 36.0 36.0 23 34.92719601672667 36.0 36.0 36.0 36.0 36.0 24 34.90768263795654 36.0 36.0 36.0 32.0 36.0 25 34.866625975936174 36.0 36.0 36.0 32.0 36.0 26 34.816111391409194 36.0 36.0 36.0 32.0 36.0 27 34.80720610745774 36.0 36.0 36.0 32.0 36.0 28 34.784201592283154 36.0 36.0 36.0 32.0 36.0 29 34.76091487869744 36.0 36.0 36.0 32.0 36.0 30 34.74626087105243 36.0 36.0 36.0 32.0 36.0 31 34.73175223834649 36.0 36.0 36.0 32.0 36.0 32 34.69120652647962 36.0 36.0 36.0 32.0 36.0 33 34.67382139406015 36.0 36.0 36.0 32.0 36.0 34 34.66296316883161 36.0 36.0 36.0 32.0 36.0 35 34.61895411282806 36.0 36.0 36.0 32.0 36.0 36 34.59450012399627 36.0 36.0 36.0 32.0 36.0 37 34.57696213410411 36.0 36.0 36.0 32.0 36.0 38 34.538455947117725 36.0 36.0 36.0 32.0 36.0 39 34.54022182505409 36.0 36.0 36.0 32.0 36.0 40 34.511832023533636 36.0 36.0 36.0 32.0 36.0 41 34.494021455630715 36.0 36.0 36.0 32.0 36.0 42 34.43532418611413 36.0 36.0 36.0 32.0 36.0 43 34.42883362265797 36.0 36.0 36.0 32.0 36.0 44 34.37672525846809 36.0 36.0 36.0 32.0 36.0 45 34.34097798852393 36.0 36.0 36.0 32.0 36.0 46 34.320294127707605 36.0 36.0 36.0 32.0 36.0 47 34.27480353004558 36.0 36.0 36.0 32.0 36.0 48 34.23715462762637 36.0 36.0 36.0 32.0 36.0 49 34.228567885820816 36.0 36.0 36.0 32.0 36.0 50 33.620273176613445 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 1.0 20 3.0 21 31.0 22 99.0 23 296.0 24 798.0 25 1768.0 26 3607.0 27 6509.0 28 10715.0 29 16551.0 30 23535.0 31 33331.0 32 47910.0 33 76336.0 34 159452.0 35 554569.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.78864524626055 17.726141504673777 11.681447716135434 26.80376553293024 2 16.00734574156501 20.496029964468505 36.76494482142323 26.731679472543256 3 18.1436669371071 24.438087847176572 28.801050976418235 28.617194239298094 4 12.402620169490076 15.955220243032691 35.78992038584219 35.85223920163504 5 14.182928706419586 37.04634467542907 33.57562489845133 15.195101719700013 6 34.3357099336191 35.60368141441567 16.635204327051557 13.425404324913684 7 30.06770624000547 30.435846894534755 21.005716655692282 18.490730209767488 8 28.170593397619054 33.120401577319775 19.35028022118393 19.35872480387724 9 27.812001936934195 13.779384050651041 18.129148187224146 40.27946582519062 10 15.551733463602769 27.000086584991724 32.16130035692258 25.28687959448293 11 37.19225408118763 20.692305389989652 22.836906421296575 19.278534107526145 12 24.83490288719522 23.420807901572406 29.183119368045237 22.56116984318714 13 29.977627200535323 19.402230438765553 25.039897980889585 25.580244379809535 14 23.589190483469427 19.240114205208073 25.507825151869195 31.662870159453306 15 25.36473566285255 27.126306292438468 22.172764123351634 25.336193921357346 16 25.638986429789256 25.47383498752011 23.947707387988306 24.939471194702325 17 24.159070113477966 25.64691847886505 25.27279179743285 24.921219610224135 18 24.75390297219149 24.74866515945933 26.21642855997563 24.281003308373553 19 25.734598524229003 24.561122210214524 25.443420761487573 24.2608585040689 20 26.091232300946444 24.27317098199683 25.015339357906235 24.62025735915049 21 26.66946014588803 24.043197735571535 24.54891011553032 24.738432003010118 22 25.881976928142024 24.311606906164755 24.8180675394864 24.988348626206825 23 24.684688344131445 24.195753514419515 25.34101975087199 25.77853839057705 24 25.01298762381 24.552808854245722 25.281932985999024 25.152270535945252 25 25.13597065086329 24.225865209471767 25.516196755517928 25.12196738414702 26 24.775538957713987 24.9521360011032 25.531742035761972 24.740583005420845 27 25.144341523643575 24.69963814400479 24.947218198630612 25.208802133721026 28 24.70795616349324 24.58726894115937 25.442876140061315 25.261898755286076 29 24.856572031465966 24.740055179815432 25.35684622020402 25.046526568514583 30 24.814776411531483 24.75951131544825 25.53151232881984 24.894199944200427 31 25.22278286154109 24.49852475840246 24.879308133071067 25.399384246985374 32 25.007402656404498 24.845452844811458 24.768486597717736 25.378657901066305 33 24.812607165611222 24.552737239542132 25.211872560044814 25.42278303480183 34 25.352943754549763 24.4598279616329 25.32867837034962 24.858549913467716 35 25.649500581514673 24.467550625983446 25.37103629335705 24.51191249914483 36 24.948634127464334 24.959003512762894 25.066866500043826 25.02549585972894 37 25.492952326384362 24.6330784212698 24.841312430116538 25.0326568222293 38 24.952481949554965 24.723497328512757 25.13656762529478 25.187453096637498 39 25.396484341594405 24.60372945422204 24.733610412711442 25.26617579147211 40 25.697170271171654 24.728913859599615 25.137146497686793 24.436769371541942 41 24.916808214741167 24.756250474350846 25.427022658737837 24.899918652170147 42 25.472694465348567 25.074078983375518 25.043506704522134 24.40971984675378 43 24.96715663585608 24.453848793320372 25.274799278675275 25.304195292148275 44 24.793266517299767 24.945590825907747 24.827472677829277 25.433669978963213 45 24.879209495630164 24.967183464742 25.12421112042279 25.02939591920505 46 24.944094306384578 24.648638594810926 24.954142366040124 25.45312473276437 47 25.089845963078172 24.721589755101604 25.166062705106413 25.022501576713807 48 25.361388535835268 25.160531016398913 24.601037532242493 24.877042915523326 49 24.998637108489373 25.00205769894742 24.7056421570671 25.29366303549611 50 24.79438846736832 25.431051991337274 24.78487485863205 24.989684682662354 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 97.0 1 72.0 2 47.0 3 128.0 4 209.0 5 218.5 6 228.0 7 201.0 8 174.0 9 249.5 10 325.0 11 494.0 12 663.0 13 1190.5 14 1718.0 15 2142.5 16 2567.0 17 2623.5 18 2680.0 19 2631.0 20 2582.0 21 2860.5 22 3139.0 23 3506.5 24 3874.0 25 4561.0 26 5248.0 27 6509.0 28 7770.0 29 9244.5 30 10719.0 31 12422.5 32 14126.0 33 16614.5 34 19103.0 35 22132.0 36 25161.0 37 29022.0 38 32883.0 39 35809.5 40 38736.0 41 42333.0 42 45930.0 43 48060.5 44 50191.0 45 55065.5 46 59940.0 47 63528.5 48 67117.0 49 69969.5 50 72822.0 51 72787.0 52 72752.0 53 72414.5 54 72077.0 55 71268.5 56 70460.0 57 67896.5 58 65333.0 59 60007.5 60 54682.0 61 47776.5 62 40871.0 63 35305.0 64 29739.0 65 24948.0 66 20157.0 67 17129.5 68 14102.0 69 12363.5 70 10625.0 71 8272.0 72 5919.0 73 5054.0 74 4189.0 75 3274.0 76 2359.0 77 2040.5 78 1722.0 79 1376.5 80 1031.0 81 843.5 82 656.0 83 535.5 84 415.0 85 297.5 86 180.0 87 128.5 88 77.0 89 56.0 90 35.0 91 32.5 92 30.0 93 25.0 94 20.0 95 20.0 96 20.0 97 13.0 98 6.0 99 6.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008551467004164565 2 4.275733502082282E-4 3 1.0689333755205705E-4 4 0.0 5 0.0 6 2.137866751041141E-4 7 0.0 8 1.0689333755205705E-4 9 0.0013896133881767419 10 0.0016034000632808559 11 0.0 12 2.137866751041141E-4 13 1.0689333755205705E-4 14 3.206800126561712E-4 15 0.004275733502082282 16 7.482533628643994E-4 17 0.0 18 7.482533628643994E-4 19 1.0689333755205705E-4 20 0.0010689333755205706 21 0.0 22 0.0 23 9.620400379685135E-4 24 6.413600253123424E-4 25 0.0017102934008329128 26 0.005237773540050796 27 0.006092920240467252 28 0.003848160151874054 29 0.0026723334388014264 30 0.002244760088593198 31 0.007696320303748108 32 0.003955053489426111 33 0.004703306852290511 34 0.0024585467636973122 35 0.0025654401012493696 36 0.007054960278435766 37 0.0027792267763534838 38 0.00833768032906045 39 0.004275733502082282 40 0.0017102934008329128 41 0.0024585467636973122 42 0.0025654401012493696 43 0.0011758267130726277 44 8.551467004164564E-4 45 8.551467004164564E-4 46 8.551467004164564E-4 47 0.0023516534261452554 48 0.0024585467636973122 49 1.0689333755205705E-4 50 0.0010689333755205706 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 935512.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.34335063248875 #Duplication Level Percentage of deduplicated Percentage of total 1 82.01044117639327 52.76826572137766 2 11.179859048755398 14.386991815917414 3 2.960114764147692 5.713911065458851 4 1.2580968595795143 3.238006694622306 5 0.6655357382858423 2.141139968348911 6 0.42444916924684994 1.6386289033511174 7 0.29037888115266947 1.3078765116393192 8 0.21652520570688946 1.1145565785256113 9 0.15242846403742297 0.8826982297138446 >10 0.7437619218135875 8.44644071462043 >50 0.053727451505042906 2.468168157552926 >100 0.04284051609945887 5.1845931005159445 >500 0.001840803276293165 0.708722538355668 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 3.2068001265617114E-4 13 0.0 0.0 0.0 0.0 5.344666877602853E-4 14 0.0 0.0 0.0 0.0 6.413600253123423E-4 15 0.0 0.0 0.0 1.0689333755205706E-4 0.0011758267130726277 16 0.0 0.0 0.0 1.0689333755205706E-4 0.0011758267130726277 17 0.0 0.0 0.0 1.0689333755205706E-4 0.0011758267130726277 18 0.0 0.0 0.0 1.0689333755205706E-4 0.0011758267130726277 19 0.0 0.0 0.0 2.1378667510411412E-4 0.0011758267130726277 20 0.0 0.0 0.0 2.1378667510411412E-4 0.0012827200506246846 21 0.0 0.0 0.0 2.1378667510411412E-4 0.0012827200506246846 22 0.0 0.0 0.0 2.1378667510411412E-4 0.0013896133881767417 23 0.0 0.0 0.0 4.2757335020822824E-4 0.0016034000632808559 24 0.0 0.0 0.0 0.0014965067257287988 0.0016034000632808559 25 0.0 0.0 0.0 0.002244760088593198 0.0016034000632808559 26 0.0 0.0 0.0 0.0029930134514575975 0.001924080075937027 27 0.0 0.0 0.0 0.003955053489426111 0.001924080075937027 28 0.0 0.0 0.0 0.006841173603331652 0.001924080075937027 29 0.0 0.0 0.0 0.012078947143382448 0.001924080075937027 30 0.0 0.0 0.0 0.02180624086061964 0.001924080075937027 31 0.0 0.0 0.0 0.044895201771863964 0.002030973413489084 32 0.0 0.0 0.0 0.07065649612190972 0.002030973413489084 33 0.0 0.0 0.0 0.09299720367028964 0.002030973413489084 34 0.0 0.0 0.0 0.11907917803299156 0.002030973413489084 35 0.0 0.0 0.0 0.1513609659737128 0.002030973413489084 36 0.0 0.0 0.0 0.19155286089328624 0.002030973413489084 37 0.0 0.0 0.0 0.2653092638042056 0.002030973413489084 38 0.0 0.0 0.0 0.35830646747449524 0.002030973413489084 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1450 0.0 20.941034 1 AAGCGAT 65 4.9296446E-4 20.30853 25 CGTCGTA 130 1.6243575E-9 20.30636 10 TGCGTAG 55 0.0044845697 19.99869 13 ATTATAC 150 4.656613E-10 19.065414 3 GTACTAT 105 1.7892653E-6 18.859938 1 ACCGTCG 140 4.081812E-9 18.855906 8 ATACCGT 130 3.587411E-8 18.614162 6 GTGTATA 190 1.8189894E-12 18.529062 1 GTATATA 110 2.791101E-6 18.002668 1 CCGTCGT 135 5.525726E-8 17.924751 9 GACGGTA 210 0.0 17.808355 8 GTATAAA 100 2.47888E-5 17.60261 1 GTCCTAA 150 9.569703E-9 17.602608 1 TATTAGG 75 0.0012906798 17.599787 2 GTCCTAT 240 0.0 17.419247 1 GGCGTTA 165 1.6570993E-9 17.333124 42 CATTCGA 140 8.3671694E-8 17.285503 41 ATAAGGC 115 4.27347E-6 17.21626 3 ATAGGAC 385 0.0 17.141733 3 >>END_MODULE