##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064126_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 740145 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.266876085091436 32.0 32.0 32.0 32.0 32.0 2 31.428276891690142 32.0 32.0 32.0 32.0 32.0 3 31.48743962331705 32.0 32.0 32.0 32.0 32.0 4 31.56393004073526 32.0 32.0 32.0 32.0 32.0 5 31.525278154956123 32.0 32.0 32.0 32.0 32.0 6 35.0962689743226 36.0 36.0 36.0 36.0 36.0 7 35.11113092704808 36.0 36.0 36.0 36.0 36.0 8 35.07939930689257 36.0 36.0 36.0 36.0 36.0 9 35.161034662127015 36.0 36.0 36.0 36.0 36.0 10 35.02578413689209 36.0 36.0 36.0 36.0 36.0 11 35.16267623235988 36.0 36.0 36.0 36.0 36.0 12 35.06499131926852 36.0 36.0 36.0 36.0 36.0 13 35.099962845118185 36.0 36.0 36.0 36.0 36.0 14 35.047682548689785 36.0 36.0 36.0 36.0 36.0 15 35.02594896945869 36.0 36.0 36.0 36.0 36.0 16 35.035568706131905 36.0 36.0 36.0 36.0 36.0 17 34.99728161373785 36.0 36.0 36.0 36.0 36.0 18 34.99033567746861 36.0 36.0 36.0 36.0 36.0 19 34.98739301082896 36.0 36.0 36.0 36.0 36.0 20 34.97219869079707 36.0 36.0 36.0 36.0 36.0 21 34.96256409217113 36.0 36.0 36.0 36.0 36.0 22 34.959845705908975 36.0 36.0 36.0 36.0 36.0 23 34.90006958096049 36.0 36.0 36.0 32.0 36.0 24 34.88352822757703 36.0 36.0 36.0 32.0 36.0 25 34.84375358882381 36.0 36.0 36.0 32.0 36.0 26 34.777413885117106 36.0 36.0 36.0 32.0 36.0 27 34.780984807031054 36.0 36.0 36.0 32.0 36.0 28 34.75478588654926 36.0 36.0 36.0 32.0 36.0 29 34.71691763100473 36.0 36.0 36.0 32.0 36.0 30 34.70188003701978 36.0 36.0 36.0 32.0 36.0 31 34.68817191226044 36.0 36.0 36.0 32.0 36.0 32 34.63846543582677 36.0 36.0 36.0 32.0 36.0 33 34.5966128258652 36.0 36.0 36.0 32.0 36.0 34 34.57976207364773 36.0 36.0 36.0 32.0 36.0 35 34.52051152139108 36.0 36.0 36.0 32.0 36.0 36 34.498569874821825 36.0 36.0 36.0 32.0 36.0 37 34.476528247843326 36.0 36.0 36.0 32.0 36.0 38 34.426416445426234 36.0 36.0 36.0 32.0 36.0 39 34.416679164217825 36.0 36.0 36.0 32.0 36.0 40 34.3842355214181 36.0 36.0 36.0 32.0 36.0 41 34.371247525822646 36.0 36.0 36.0 32.0 36.0 42 34.283018867924525 36.0 36.0 36.0 32.0 36.0 43 34.26654371778503 36.0 36.0 36.0 32.0 36.0 44 34.19364313749333 36.0 36.0 36.0 32.0 36.0 45 34.14705091569895 36.0 36.0 36.0 32.0 36.0 46 34.10031142546393 36.0 36.0 36.0 32.0 36.0 47 34.050171250228 36.0 36.0 36.0 32.0 36.0 48 33.99274331381013 36.0 36.0 36.0 32.0 36.0 49 33.949034310844496 36.0 36.0 36.0 32.0 36.0 50 33.35848921495113 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 0.0 19 3.0 20 7.0 21 25.0 22 82.0 23 316.0 24 739.0 25 1709.0 26 3372.0 27 6046.0 28 9533.0 29 14594.0 30 20250.0 31 27778.0 32 39320.0 33 61677.0 34 123819.0 35 430873.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.10219546206315 17.986493206066438 11.78655590266893 26.124755429201485 2 16.00658795172258 20.930527914351224 36.86888543908644 26.193998694839753 3 18.141359169782056 24.94099113279461 28.942380053584237 27.975269643839095 4 12.243952198555688 15.910395935931474 35.707192509575826 36.138459355937016 5 14.068864884583427 37.083409331955224 33.06460220632444 15.783123577136912 6 33.67205211972838 35.94796674151717 16.78259036779429 13.597390770960166 7 29.65418938181032 30.78086050706281 21.12194232211256 18.443007789014317 8 28.1690749785515 32.378115099068424 19.78612298941424 19.66668693296584 9 27.928462279484584 13.502967677780314 18.632260609802724 39.936309432932376 10 16.100624342184375 26.44814014664813 31.339113328712582 26.112122182454918 11 37.309986556688216 20.897256618635538 22.864708942166736 18.928047882509507 12 25.004323482997904 23.682958991763766 28.805340582373162 22.50737694286517 13 29.671913865060844 19.199314725167234 25.664299099766126 25.4644723100058 14 23.893863896755228 19.417843014332345 25.507739034566246 31.18055405434618 15 25.14578874548717 27.05820200185918 22.713589294593252 25.082419958060402 16 25.42178002180677 25.35665694324159 24.26226495905488 24.95929807589676 17 23.76845077653703 25.523782502077296 25.525538914672126 25.18222780671355 18 24.76099116383387 24.305266571189236 26.975842408193046 23.95789985678385 19 25.7341466874734 24.142026224591127 26.03719541441204 24.08663167352343 20 26.122554861094223 23.479953846694283 25.563067627563356 24.834423664648135 21 27.20737152855184 23.491072695215127 24.893770815178108 24.40778496105493 22 26.083778518176242 23.71544919758641 25.555771730289596 24.645000553947757 23 24.373566153521892 23.594391346525395 26.087156248395576 25.94488625155713 24 24.81814251357851 24.53495284675872 25.91766422568703 24.729240413975734 25 24.944063729517058 23.8437135198236 26.072922521509796 25.13930022914955 26 24.485030935301374 24.97172652626089 26.368848239342896 24.174394299094843 27 25.070328904166228 24.509048850551416 25.622556053690477 24.79806619159188 28 24.35002904973585 24.307467808839224 26.45228411992812 24.890219021496804 29 24.345982667628675 24.27423735134127 26.20406475724141 25.175715223788643 30 24.150841423292327 24.796551887206718 26.294697445667225 24.75790924383373 31 24.865322071776884 24.618328088539506 25.235002344280964 25.28134749540264 32 24.650156664419274 24.863231083734057 25.083196305449 25.40341594639766 33 24.369923889589238 24.306960190998893 25.682973724140634 25.64014219527124 34 25.19621844595261 24.427693384442232 25.79247391297886 24.583614256626298 35 25.793458845529205 24.27112579953899 25.7908916734449 24.144523681486906 36 24.443141297870934 25.249665918558446 25.335331291236596 24.97186149233403 37 25.34102946581058 24.93163196921547 25.30157597768986 24.425762587284087 38 24.646800668025058 24.759219124108895 25.6585667727796 24.93541343508645 39 25.262596100579643 24.55945737795733 25.003985893988734 25.173960627474294 40 25.54953703641151 25.01881444030249 25.389158288554743 24.042490234731254 41 24.342334600698806 25.180309085848474 26.13150875941404 24.34584755403868 42 25.79307120785701 25.55851750167876 25.126295551180945 23.522115739283286 43 24.814256858546077 24.529173731819196 25.568038263289804 25.088531146344923 44 24.344207475663225 25.350510379863135 24.940990494977267 25.364291649496373 45 24.70356639086001 25.47059173228559 24.975544902801122 24.850296974053276 46 24.435205914580678 25.111296962589357 24.98821164189873 25.465285480931232 47 24.821584432920883 25.059652005199112 25.33960433763981 24.779159224240196 48 25.502952184075774 25.572534554740383 24.1893991596071 24.735114101576748 49 24.671887286493675 25.755733359274302 24.603386917645533 24.968992436586493 50 24.804292195737528 26.0243415381539 24.36856028773168 24.802805978376888 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 249.0 1 151.5 2 54.0 3 179.0 4 304.0 5 326.0 6 348.0 7 318.5 8 289.0 9 398.5 10 508.0 11 715.5 12 923.0 13 1588.0 14 2253.0 15 2961.0 16 3669.0 17 3806.5 18 3944.0 19 3789.0 20 3634.0 21 3726.5 22 3819.0 23 4116.5 24 4414.0 25 4435.5 26 4457.0 27 5378.5 28 6300.0 29 7262.0 30 8224.0 31 9499.5 32 10775.0 33 12994.5 34 15214.0 35 17666.5 36 20119.0 37 23357.5 38 26596.0 39 28738.0 40 30880.0 41 33479.5 42 36079.0 43 36944.5 44 37810.0 45 41747.0 46 45684.0 47 48618.0 48 51552.0 49 54099.5 50 56647.0 51 55071.0 52 53495.0 53 53074.0 54 52653.0 55 53446.0 56 54239.0 57 52861.0 58 51483.0 59 47206.0 60 42929.0 61 37736.5 62 32544.0 63 28584.0 64 24624.0 65 20765.0 66 16906.0 67 14249.5 68 11593.0 69 10561.5 70 9530.0 71 7469.0 72 5408.0 73 4617.5 74 3827.0 75 2977.0 76 2127.0 77 1850.5 78 1574.0 79 1304.5 80 1035.0 81 847.5 82 660.0 83 532.5 84 405.0 85 297.5 86 190.0 87 132.5 88 75.0 89 56.5 90 38.0 91 29.0 92 20.0 93 20.5 94 21.0 95 15.5 96 10.0 97 8.0 98 6.0 99 7.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009862932263272737 2 8.106519668443346E-4 3 2.7021732228144486E-4 4 0.0 5 0.0 6 4.053259834221673E-4 7 0.0 8 0.0 9 5.404346445628897E-4 10 8.106519668443346E-4 11 0.0 12 1.3510866114072243E-4 13 5.404346445628897E-4 14 1.3510866114072243E-4 15 0.00445858581764384 16 0.0010808692891257795 17 0.0 18 6.755433057036122E-4 19 0.0 20 4.053259834221673E-4 21 0.0 22 4.053259834221673E-4 23 4.053259834221673E-4 24 6.755433057036122E-4 25 0.002296847239392281 26 0.007025650379317566 27 0.0068905417181768435 28 0.004728803139925285 29 0.0036479338507995054 30 0.004053259834221673 31 0.006214998412473231 32 0.0037830425119402284 33 0.004863911801066007 34 0.003512825189658783 35 0.004188368495362395 36 0.007566085023880457 37 0.00445858581764384 38 0.007160759040458289 39 0.004728803139925285 40 0.0029723905450958934 41 0.0036479338507995054 42 0.002161738578251559 43 0.0013510866114072244 44 0.0013510866114072244 45 0.0017564125948293914 46 0.0010808692891257795 47 0.002567064561673726 48 0.0020266299171108363 49 4.053259834221673E-4 50 0.0014861952725479467 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 740145.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.896609630356785 #Duplication Level Percentage of deduplicated Percentage of total 1 77.92538179664226 42.778392647867804 2 12.970230212307202 14.24043329561776 3 3.982687097617108 6.559080566332351 4 1.6813606473144838 3.6920399641386883 5 0.8822978728988558 2.4217580953111315 6 0.5280412418882379 1.7392604354800434 7 0.37116203853731194 1.4262876277433179 8 0.2635897296949207 1.1576145994906661 9 0.19338759887589038 0.95546911705576 >10 1.0200038537726397 10.023776259245817 >50 0.0927848320701118 3.580846297782072 >100 0.08165032184943515 8.737954664106375 >500 0.0071753313138322285 2.5490851250359725 >1k 2.474252177183527E-4 0.1380013047922709 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1016 0.13727039971897398 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 886 0.11970627377068006 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 828 0.11186997142451818 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 800 0.10808692891257794 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 793 0.10714116828459289 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 783 0.10579008167318567 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 770 0.10403366907835628 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 758 0.10241236514466759 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 757 0.10227725648352687 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.3510866114072243E-4 0.0 5 0.0 0.0 0.0 1.3510866114072243E-4 0.0 6 0.0 0.0 0.0 1.3510866114072243E-4 1.3510866114072243E-4 7 0.0 0.0 0.0 2.7021732228144486E-4 1.3510866114072243E-4 8 0.0 0.0 0.0 2.7021732228144486E-4 1.3510866114072243E-4 9 0.0 0.0 0.0 2.7021732228144486E-4 1.3510866114072243E-4 10 0.0 0.0 0.0 5.404346445628897E-4 1.3510866114072243E-4 11 0.0 0.0 0.0 6.755433057036121E-4 1.3510866114072243E-4 12 0.0 0.0 0.0 6.755433057036121E-4 5.404346445628897E-4 13 0.0 0.0 0.0 6.755433057036121E-4 5.404346445628897E-4 14 0.0 0.0 0.0 6.755433057036121E-4 5.404346445628897E-4 15 0.0 0.0 0.0 6.755433057036121E-4 5.404346445628897E-4 16 0.0 0.0 0.0 8.106519668443345E-4 5.404346445628897E-4 17 0.0 0.0 0.0 9.45760627985057E-4 5.404346445628897E-4 18 0.0 0.0 0.0 9.45760627985057E-4 5.404346445628897E-4 19 0.0 0.0 0.0 9.45760627985057E-4 5.404346445628897E-4 20 0.0 0.0 0.0 9.45760627985057E-4 0.0012159779502665018 21 0.0 0.0 0.0 0.0010808692891257795 0.0012159779502665018 22 0.0 0.0 0.0 0.001891521255970114 0.0012159779502665018 23 0.0 0.0 0.0 0.0035128251896587833 0.0012159779502665018 24 0.0 0.0 0.0 0.004999020462206729 0.0012159779502665018 25 0.0 0.0 0.0 0.005674563767910342 0.0012159779502665018 26 0.0 0.0 0.0 0.006485215734754676 0.0013510866114072242 27 0.0 0.0 0.0 0.007836302346161901 0.0013510866114072242 28 0.0 0.0 0.0 0.010133149585554183 0.0013510866114072242 29 0.0 0.0 0.0 0.015672604692323802 0.0013510866114072242 30 0.0 0.0 0.0 0.028102601517270266 0.0013510866114072242 31 0.0 0.0 0.0 0.058907376257354975 0.001621303933688669 32 0.0 0.0 0.0 0.09295475886481704 0.001621303933688669 33 0.0 0.0 0.0 0.12119246904322802 0.001621303933688669 34 0.0 0.0 0.0 0.15199724378331272 0.0017564125948293916 35 0.0 0.0 0.0 0.19077342953070006 0.0017564125948293916 36 0.0 0.0 0.0 0.24414135068128542 0.0017564125948293916 37 0.0 0.0 0.0 0.32128839619263794 0.0017564125948293916 38 0.0 0.0 0.0 0.4357254321788298 0.0017564125948293916 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGACGT 40 7.038125E-4 27.494257 4 GTATAAA 80 3.6147176E-6 21.998379 1 GTACTAT 85 6.112052E-6 20.704355 1 CGAGCCG 320 0.0 20.62766 15 GATATAC 185 0.0 20.214727 1 CCCGTTG 55 0.004475148 20.005285 31 GTATATA 55 0.0044839084 19.998528 1 GAACCGT 55 0.0044874162 19.995823 6 ATACACT 195 0.0 19.175482 4 GTACAAT 70 8.123283E-4 18.855753 1 GTCTTAG 130 3.5846824E-8 18.614014 1 ACCCGTT 60 0.0073981704 18.338179 30 CGTCGAA 60 0.0074097156 18.333221 22 GCGTAGA 60 0.007412604 18.331982 1 TGGATAC 350 0.0 18.22846 24 GTATAGA 110 2.7954175E-6 17.998674 1 GTATCAA 2440 0.0 17.760986 1 AGGCCCG 360 0.0 17.72331 10 CCGTCGT 360 0.0 17.722115 9 GTCGAAC 75 0.001290282 17.599892 23 >>END_MODULE