##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064123_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 797032 Sequences flagged as poor quality 0 Sequence length 50 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.33405936022644 32.0 32.0 32.0 32.0 32.0 2 31.472996065402643 32.0 32.0 32.0 32.0 32.0 3 31.533727629505464 32.0 32.0 32.0 32.0 32.0 4 31.60269976613235 32.0 32.0 32.0 32.0 32.0 5 31.586554868562366 32.0 32.0 32.0 32.0 32.0 6 35.16744873480613 36.0 36.0 36.0 36.0 36.0 7 35.191203113551275 36.0 36.0 36.0 36.0 36.0 8 35.139399672786034 36.0 36.0 36.0 36.0 36.0 9 35.24132155296149 36.0 36.0 36.0 36.0 36.0 10 35.12534377540676 36.0 36.0 36.0 36.0 36.0 11 35.238893795983095 36.0 36.0 36.0 36.0 36.0 12 35.178657820514104 36.0 36.0 36.0 36.0 36.0 13 35.209923817362416 36.0 36.0 36.0 36.0 36.0 14 35.15851810215901 36.0 36.0 36.0 36.0 36.0 15 35.12981912896847 36.0 36.0 36.0 36.0 36.0 16 35.14314732658162 36.0 36.0 36.0 36.0 36.0 17 35.15039170321894 36.0 36.0 36.0 36.0 36.0 18 35.13917383492758 36.0 36.0 36.0 36.0 36.0 19 35.10054552389364 36.0 36.0 36.0 36.0 36.0 20 35.08175079545112 36.0 36.0 36.0 36.0 36.0 21 35.05737410794046 36.0 36.0 36.0 36.0 36.0 22 35.026493290106295 36.0 36.0 36.0 36.0 36.0 23 35.01897916269359 36.0 36.0 36.0 36.0 36.0 24 34.99887708398157 36.0 36.0 36.0 36.0 36.0 25 34.94176896285218 36.0 36.0 36.0 36.0 36.0 26 34.920118640154975 36.0 36.0 36.0 36.0 36.0 27 34.847171757219286 36.0 36.0 36.0 36.0 36.0 28 34.79214008973291 36.0 36.0 36.0 32.0 36.0 29 34.756935731564106 36.0 36.0 36.0 32.0 36.0 30 34.68977908038824 36.0 36.0 36.0 32.0 36.0 31 34.6815497997571 36.0 36.0 36.0 32.0 36.0 32 34.63662186712704 36.0 36.0 36.0 32.0 36.0 33 34.68333266418412 36.0 36.0 36.0 32.0 36.0 34 34.63928926316635 36.0 36.0 36.0 32.0 36.0 35 34.61545709582551 36.0 36.0 36.0 32.0 36.0 36 34.544168866494694 36.0 36.0 36.0 32.0 36.0 37 34.432342741571226 36.0 36.0 36.0 32.0 36.0 38 34.38672725812766 36.0 36.0 36.0 32.0 36.0 39 34.17855995744211 36.0 36.0 36.0 32.0 36.0 40 34.28227599393751 36.0 36.0 36.0 32.0 36.0 41 34.26907075249174 36.0 36.0 36.0 32.0 36.0 42 34.239317869295085 36.0 36.0 36.0 32.0 36.0 43 34.25212663983378 36.0 36.0 36.0 32.0 36.0 44 34.10933814451616 36.0 36.0 36.0 32.0 36.0 45 34.09377164279477 36.0 36.0 36.0 32.0 36.0 46 33.882241867327785 36.0 36.0 36.0 32.0 36.0 47 33.911809061618605 36.0 36.0 36.0 32.0 36.0 48 33.845067701171345 36.0 36.0 36.0 32.0 36.0 49 33.78317683606179 36.0 36.0 36.0 27.0 36.0 50 33.33178592578466 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 4.0 20 1.0 21 22.0 22 83.0 23 211.0 24 594.0 25 1388.0 26 3005.0 27 5828.0 28 9818.0 29 14893.0 30 21296.0 31 29728.0 32 42359.0 33 67853.0 34 138377.0 35 461571.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.67295554869617 20.607005101874368 12.495075047492854 26.224964301936605 2 11.520659850519868 21.584660031190836 46.74760893267372 20.14707118561558 3 18.550117310515287 27.34351279123747 30.385807309637023 23.720562588610218 4 10.25642634172781 18.341798070842827 40.831610274116976 30.570165313312387 5 9.91152174567646 41.701336960122056 36.91696192875568 11.470179365445803 6 29.32567324774915 40.08759999598511 19.189317367433176 11.39740938883257 7 26.099077577813688 32.33144967830652 23.33469672484919 18.234776019030605 8 22.21968503146674 43.51243111945317 20.142227664635797 14.125656184444288 9 26.78722437887225 14.36655132004547 20.697650492209714 38.14857380887257 10 14.681829701916877 30.19838750555189 35.98163673456073 19.138146057970506 11 33.78333617721748 20.354515251583376 29.15190356221582 16.71024500898333 12 25.54332961118151 23.98793019083347 34.66268521887507 15.806054979109947 13 30.82999489353587 23.29777210114061 26.27269522188026 19.599537783443264 14 18.607533950958054 25.566602093767877 27.989465918557848 27.836398036716215 15 19.82539369856448 39.20235183997852 22.597814535384877 18.37443992607212 16 18.16304381920266 27.907405664816036 34.3764624698096 19.553088046171702 17 18.482193939515604 31.403381545533932 30.710937578415926 19.40348693653454 18 18.581460445076793 27.22930475728046 37.093161997463085 17.09607280017967 19 24.215589838300094 25.17050758313342 28.19096347449036 22.42293910407612 20 23.972307120954344 29.164345543694825 29.889163241441956 16.974184093908875 21 21.43841150668982 26.36431159602124 27.288866695440085 24.90841020184886 22 23.14401823768461 32.13965328826608 27.613856926518544 17.102471547530772 23 19.304765465618438 31.780519079678704 30.141174817383625 18.773540637319233 24 23.822751521903875 27.462648740069355 30.83756154112528 17.87703819690149 25 21.10170246455238 29.9564252384818 30.861169279103063 18.080703017862767 26 16.928672971212976 31.918553659953503 32.55080672178231 18.60196664705122 27 18.983927025433193 30.97554548990577 30.609417934980364 19.431109549680674 28 17.81472475464179 31.852024722772203 28.547875904331004 21.785374618255002 29 20.65030143723769 28.050287635740855 27.836238966644288 23.463171960377156 30 18.202874256906473 29.16113554979511 30.437035605754538 22.198954587543884 31 22.803697978358194 26.8700688602919 29.657229326855518 20.66900383449439 32 19.40924352456425 31.328261055040574 29.635563830908445 19.62693158948673 33 18.03315712935998 31.538670979544364 32.451100574283586 17.97707131681207 34 20.035683232268482 30.76499379558426 31.76184077298614 17.437482199161117 35 18.63743069400722 31.9340183109601 30.982586143945678 18.445964851087002 36 17.50722739181498 30.494950863773703 32.51033918551309 19.487482558898225 37 18.645405429821103 30.42536693575707 27.898033389961935 23.03119424445989 38 19.833218523635114 33.21526128303288 27.93740299207876 19.014117201253246 39 22.730763053821292 28.122929757292276 28.845130789151423 20.30117639973501 40 23.91523371580209 28.270986116948865 30.21925559744798 17.59452456980107 41 22.93579017630851 26.615157613687124 32.00089835535726 18.448153854647106 42 20.510423776448388 32.220610671698715 30.22844983338017 17.04051571847272 43 17.5341238584081 32.60069031884902 31.331341755507687 18.5338440672352 44 17.380841552419177 32.11421946809832 29.714426236501396 20.790512742981104 45 17.91502826786848 32.18371479690546 29.846628307014395 20.05462862821166 46 19.73669682871869 27.99048465047652 29.908735954069364 22.364082566735423 47 23.09806918028303 28.417641235654358 28.887642578156857 19.59664700590576 48 18.20635263179026 30.019045850564098 28.742421809129965 23.03217970851568 49 21.622120093195875 28.543180880041053 28.843169211737056 20.991529815026016 50 18.906826562478436 33.36608035693001 27.30499523850749 20.422097842084067 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 22.0 1 17.5 2 13.0 3 45.0 4 77.0 5 100.0 6 123.0 7 125.5 8 128.0 9 188.0 10 248.0 11 385.0 12 522.0 13 996.0 14 1470.0 15 2013.0 16 2556.0 17 2977.0 18 3398.0 19 3557.5 20 3717.0 21 4249.5 22 4782.0 23 5508.5 24 6235.0 25 7848.5 26 9462.0 27 14352.5 28 19243.0 29 25089.0 30 30935.0 31 38515.5 32 46096.0 33 59227.0 34 72358.0 35 85751.5 36 99145.0 37 96462.0 38 93779.0 39 82727.0 40 71675.0 41 63197.0 42 54719.0 43 48859.5 44 43000.0 45 40798.0 46 38596.0 47 37657.0 48 36718.0 49 35354.0 50 33990.0 51 32124.0 52 30258.0 53 27351.0 54 24444.0 55 21868.5 56 19293.0 57 17138.5 58 14984.0 59 12932.0 60 10880.0 61 9258.0 62 7636.0 63 6452.0 64 5268.0 65 4552.0 66 3836.0 67 3309.5 68 2783.0 69 2303.0 70 1823.0 71 1399.0 72 975.0 73 823.0 74 671.0 75 554.5 76 438.0 77 350.5 78 263.0 79 215.0 80 167.0 81 140.5 82 114.0 83 94.5 84 75.0 85 64.0 86 53.0 87 36.5 88 20.0 89 19.0 90 18.0 91 14.0 92 10.0 93 7.5 94 5.0 95 6.0 96 7.0 97 5.0 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00878258338435596 2 3.763964307581126E-4 3 2.509309538387417E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.001756516676871192 10 7.527928615162252E-4 11 0.0 12 2.509309538387417E-4 13 3.763964307581126E-4 14 0.0 15 0.004893153599855464 16 8.78258338435596E-4 17 0.0 18 1.2546547691937086E-4 19 0.0 20 5.018619076774835E-4 21 0.0 22 1.2546547691937086E-4 23 7.527928615162252E-4 24 5.018619076774835E-4 25 0.0013801202461130797 26 0.005144084553694205 27 0.005269550030613576 28 0.00426582621525861 29 0.002132913107629305 30 0.0032621023999036425 31 0.007026066707484768 32 0.0025093095383874175 33 0.004893153599855464 34 0.0023838440614680463 35 0.00288570596914553 36 0.008029790522839735 37 0.0032621023999036425 38 0.007653394092081623 39 0.0030111714460649007 40 0.002132913107629305 41 0.0025093095383874175 42 0.001003723815354967 43 0.0011291892922743378 44 6.273273845968544E-4 45 0.001756516676871192 46 5.018619076774835E-4 47 0.0016310511999518213 48 0.001003723815354967 49 1.2546547691937086E-4 50 0.0016310511999518213 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 797032.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.9282813979571 #Duplication Level Percentage of deduplicated Percentage of total 1 81.0918418139843 51.02970240749028 2 12.265557874742704 15.437009548894748 3 3.2600620459298577 6.154503054032213 4 1.198749502921059 3.017409841819104 5 0.5801349426206318 1.8253447459009406 6 0.33610144268843545 1.2690171698254327 7 0.21756347523696415 0.9583626914140404 8 0.14366011973595028 0.7232227552326471 9 0.1181391210900058 0.669086267045329 >10 0.6823974788871099 8.078677284460364 >50 0.061227750603412755 2.7036217335288466 >100 0.03914443313555076 4.7055191450671785 >500 0.00421555432977822 1.807045672503145 >1k 0.0012044440942223487 1.621477682785765 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 2956 0.3708759497736603 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 2543 0.31905870780596013 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 2271 0.28493209808389125 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 1993 0.2500526955003061 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 1545 0.19384416184042796 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 1528 0.19171124873279868 No Hit TTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCCATATTTCACGTCCT 991 0.12433628762709653 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTG 961 0.12057232331951541 No Hit GTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGATTTCGTCA 917 0.11505184233506309 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCAGTGATTTCGTCA 855 0.10727298276606209 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 1.2546547691937086E-4 0.0 3 0.0 0.0 0.0 1.2546547691937086E-4 0.0 4 0.0 0.0 0.0 1.2546547691937086E-4 0.0 5 0.0 0.0 0.0 1.2546547691937086E-4 0.0 6 0.0 0.0 0.0 1.2546547691937086E-4 0.0 7 0.0 0.0 0.0 1.2546547691937086E-4 0.0 8 0.0 0.0 0.0 1.2546547691937086E-4 0.0 9 0.0 0.0 0.0 1.2546547691937086E-4 0.0 10 0.0 0.0 0.0 1.2546547691937086E-4 0.0 11 0.0 0.0 0.0 1.2546547691937086E-4 0.0 12 0.0 0.0 0.0 1.2546547691937086E-4 0.0 13 0.0 0.0 0.0 1.2546547691937086E-4 0.0 14 0.0 0.0 0.0 1.2546547691937086E-4 0.0 15 0.0 0.0 0.0 1.2546547691937086E-4 0.0 16 0.0 0.0 0.0 2.509309538387417E-4 0.0 17 0.0 0.0 0.0 2.509309538387417E-4 0.0 18 0.0 0.0 0.0 2.509309538387417E-4 0.0 19 0.0 0.0 0.0 2.509309538387417E-4 0.0 20 0.0 0.0 0.0 2.509309538387417E-4 0.0 21 0.0 0.0 0.0 3.763964307581126E-4 0.0 22 0.0 0.0 0.0 0.0011291892922743378 0.0 23 0.0 0.0 0.0 0.001881982153790563 0.0 24 0.0 0.0 0.0 0.0032621023999036425 0.0 25 0.0 0.0 0.0 0.003889429784500497 0.0 26 0.0 0.0 0.0 0.004767688122936093 0.0 27 0.0 0.0 0.0 0.005520480984452318 0.0 28 0.0 0.0 0.0 0.006273273845968544 0.0 29 0.0 0.0 0.0 0.009535376245872185 0.0 30 0.0 0.0 0.0 0.015557719138001988 0.0 31 0.0 0.0 0.0 0.03362474781439139 0.0 32 0.0 0.0 0.0 0.05269550030613576 0.0 33 0.0 0.0 0.0 0.07038613255176705 0.0 34 0.0 0.0 0.0 0.08995874695118891 0.0 35 0.0 0.0 0.0 0.11354625661203063 0.0 36 0.0 0.0 0.0 0.1407722651035341 0.0 37 0.0 0.0 0.0 0.18945287014825002 0.0 38 0.0 0.0 0.0 0.2592116753154202 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGAATA 25 0.002353021 35.19784 11 TCACGCT 40 7.0273795E-4 27.501764 27 TAGGACC 1125 0.0 26.59893 4 CTAGGAC 220 0.0 24.00154 3 AGGACCT 2295 0.0 22.1466 5 GGACCTG 2185 0.0 21.952444 6 GTCCTAT 205 0.0 21.462097 1 TGTAGGA 3670 0.0 20.739874 2 CGCGGTA 85 6.1123683E-6 20.704613 43 TACGGAA 75 5.472219E-5 20.532076 37 GATATAC 870 0.0 20.481504 1 ATAGGAC 215 0.0 20.46643 3 TATAGGA 230 0.0 20.085726 2 CTGTAGG 3545 0.0 20.043905 1 AGGCGTG 55 0.004479004 20.002539 7 AGAGTGT 275 0.0 20.002539 6 CAGTCCG 55 0.004479004 20.002539 9 ATTACGT 55 0.004483886 19.998772 42 CTCTAGG 210 0.0 19.903542 1 TTAGGAC 2365 0.0 19.815224 3 >>END_MODULE