##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064122_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 955982 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.283639231701017 32.0 32.0 32.0 32.0 32.0 2 31.396327545916137 32.0 32.0 32.0 32.0 32.0 3 31.466434514457386 32.0 32.0 32.0 32.0 32.0 4 31.547190219062703 32.0 32.0 32.0 32.0 32.0 5 31.503926852179227 32.0 32.0 32.0 32.0 32.0 6 35.07970861376051 36.0 36.0 36.0 36.0 36.0 7 35.09628110152702 36.0 36.0 36.0 36.0 36.0 8 35.044963189683486 36.0 36.0 36.0 36.0 36.0 9 35.147755920090546 36.0 36.0 36.0 36.0 36.0 10 35.008619409152054 36.0 36.0 36.0 36.0 36.0 11 35.15499036592739 36.0 36.0 36.0 36.0 36.0 12 35.05677721965476 36.0 36.0 36.0 36.0 36.0 13 35.09594532114622 36.0 36.0 36.0 36.0 36.0 14 35.03714609689304 36.0 36.0 36.0 36.0 36.0 15 35.00888196639686 36.0 36.0 36.0 36.0 36.0 16 35.025711781184164 36.0 36.0 36.0 36.0 36.0 17 34.987919228604724 36.0 36.0 36.0 36.0 36.0 18 34.982130416681485 36.0 36.0 36.0 36.0 36.0 19 34.97410411493104 36.0 36.0 36.0 36.0 36.0 20 34.97171913278702 36.0 36.0 36.0 36.0 36.0 21 34.97311978677423 36.0 36.0 36.0 36.0 36.0 22 34.95161833591009 36.0 36.0 36.0 36.0 36.0 23 34.89813197319615 36.0 36.0 36.0 32.0 36.0 24 34.87134171982318 36.0 36.0 36.0 32.0 36.0 25 34.844891431010204 36.0 36.0 36.0 32.0 36.0 26 34.786896615208235 36.0 36.0 36.0 32.0 36.0 27 34.783556594161816 36.0 36.0 36.0 32.0 36.0 28 34.763746597739285 36.0 36.0 36.0 32.0 36.0 29 34.72589232851664 36.0 36.0 36.0 32.0 36.0 30 34.70856878058373 36.0 36.0 36.0 32.0 36.0 31 34.691092510110025 36.0 36.0 36.0 32.0 36.0 32 34.659982091713026 36.0 36.0 36.0 32.0 36.0 33 34.62615718706001 36.0 36.0 36.0 32.0 36.0 34 34.606480038327085 36.0 36.0 36.0 32.0 36.0 35 34.569830812714045 36.0 36.0 36.0 32.0 36.0 36 34.543377385766675 36.0 36.0 36.0 32.0 36.0 37 34.53254663790741 36.0 36.0 36.0 32.0 36.0 38 34.48541395130871 36.0 36.0 36.0 32.0 36.0 39 34.491737292124746 36.0 36.0 36.0 32.0 36.0 40 34.45643223407972 36.0 36.0 36.0 32.0 36.0 41 34.43222675740757 36.0 36.0 36.0 32.0 36.0 42 34.37083020391597 36.0 36.0 36.0 32.0 36.0 43 34.353391591055065 36.0 36.0 36.0 32.0 36.0 44 34.29192181442747 36.0 36.0 36.0 32.0 36.0 45 34.25211562560801 36.0 36.0 36.0 32.0 36.0 46 34.24143341611035 36.0 36.0 36.0 32.0 36.0 47 34.18020213769715 36.0 36.0 36.0 32.0 36.0 48 34.135357151076064 36.0 36.0 36.0 32.0 36.0 49 34.11269877466312 36.0 36.0 36.0 32.0 36.0 50 33.51798360220172 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 9.0 21 35.0 22 139.0 23 349.0 24 918.0 25 2032.0 26 4058.0 27 7471.0 28 11958.0 29 17694.0 30 25035.0 31 35119.0 32 49982.0 33 79142.0 34 162964.0 35 559074.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.99490316857205 17.762645832984617 11.538904139397085 26.703546859046245 2 15.990903584903885 20.669971474328463 36.809518180800666 26.52960675996699 3 18.175380238080294 24.51097303290864 28.768279671122826 28.54536705788824 4 12.272302198158542 16.019653089702526 35.80747336246917 35.90057134966976 5 14.226732302491051 37.08322960055733 33.40355780757378 15.286480289377833 6 34.36072474243735 35.555099944454966 16.705039116886216 13.379136196221472 7 30.075043253952483 30.636037080196072 20.93292551533397 18.35599415051748 8 28.16873121042028 33.07217081493166 19.3905324577241 19.368565516923958 9 27.745675623655824 13.68182883252299 18.182046411206976 40.39044913261421 10 15.559958283340638 27.162796438811554 32.20812721698207 25.069118060865737 11 37.51357243128008 20.805935676613156 22.385044906703264 19.29544698540349 12 24.725177592441693 23.676830397256847 29.15444972232712 22.443542287974342 13 29.87697402761782 19.525678965079702 25.026648130655865 25.570698876646613 14 23.59808782610515 19.267767108098496 25.561518023389613 31.572627042406744 15 25.191484910298655 27.064804644594382 22.378890109315343 25.36482033579162 16 25.544810272235154 25.510708962054444 23.941421062266272 25.00305970344413 17 24.222631806875025 25.590963009763783 25.33876160848217 24.847643574879026 18 24.74319546434026 24.82698382811356 26.313835017468985 24.1159856900772 19 25.595932969308983 24.768928220255653 25.56486537375259 24.070273436682776 20 25.818538618285892 24.256045156134277 25.220822367182304 24.704593858397526 21 26.71744865489099 24.07639474383409 24.77630331951857 24.42985328175635 22 25.81170546276547 24.24451950404872 25.20866000474905 24.73511502843676 23 24.62033486266363 24.061114632824744 25.54556923096235 25.772981273549277 24 24.87180667337533 24.77379186550318 25.401839791292268 24.952561669829223 25 24.96514008299432 24.36428377907652 25.43638967372373 25.234186464205425 26 24.833905376015633 25.066558151163633 25.651223780795895 24.448312692024842 27 25.232315222701455 24.864607012504173 25.002484514933766 24.900593249860606 28 24.645531404756376 24.66530256146319 25.75177469668535 24.937391337095082 29 24.701556550483282 24.784823632787983 25.589669023808526 24.923950792920206 30 24.651656150099587 24.99926774566087 25.73947227475857 24.609603829480978 31 25.15074609378269 24.710642820678057 24.979182184134103 25.15942890140515 32 24.87923059059327 24.84889440286876 24.86563160988918 25.406243396648794 33 24.65262050143157 24.597387082702628 25.318769006101828 25.43122340976397 34 25.17749229306339 24.673808549966157 25.463802242151058 24.68489691481939 35 25.633166622905616 24.450362937771786 25.4804388100202 24.4360316293024 36 24.7503177583781 25.087690851174006 25.237390353744843 24.924601036703052 37 25.418280265038106 24.91458651084066 25.02955212576548 24.637581098355753 38 24.770872541214697 24.90456727575533 25.445309124613324 24.87925105841665 39 25.166564672284203 24.791016125573393 24.96236668811164 25.080052514030765 40 25.380900226892578 24.831713493988758 25.375879091048887 24.41150718806978 41 24.581148765414017 25.210157874696115 25.523250218631137 24.685443141258727 42 25.483099241288627 25.271689385467848 25.073146136409047 24.17206523683448 43 24.916550117525468 24.526158439186453 25.40893319092894 25.148358252359138 44 24.71894832749803 25.127541547110088 24.819370624176877 25.334139501215002 45 24.915661138221587 25.087843174174786 25.064829779332925 24.931665908270702 46 24.653467521504314 25.02283019045557 25.03151246219812 25.292189825841998 47 24.776037591373733 24.831583616119435 25.46361578469482 24.92876300781201 48 25.314212609091797 25.298626199185946 24.611987309105707 24.77517388261655 49 24.619160044310597 25.512275897273895 24.709015574609904 25.159548483805604 50 24.709848770930375 25.60632323082282 24.761733407115518 24.922094591131284 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 126.0 1 86.5 2 47.0 3 128.0 4 209.0 5 229.0 6 249.0 7 222.0 8 195.0 9 280.0 10 365.0 11 588.5 12 812.0 13 1412.5 14 2013.0 15 2584.5 16 3156.0 17 3235.0 18 3314.0 19 3295.5 20 3277.0 21 3517.5 22 3758.0 23 4250.0 24 4742.0 25 5445.5 26 6149.0 27 7233.0 28 8317.0 29 9700.0 30 11083.0 31 12867.0 32 14651.0 33 17250.5 34 19850.0 35 22765.5 36 25681.0 37 29500.0 38 33319.0 39 36466.5 40 39614.0 41 43747.5 42 47881.0 43 50072.5 44 52264.0 45 56974.5 46 61685.0 47 65369.0 48 69053.0 49 72145.5 50 75238.0 51 73465.0 52 71692.0 53 71244.0 54 70796.0 55 70986.5 56 71177.0 57 68207.5 58 65238.0 59 59913.5 60 54589.0 61 48025.5 62 41462.0 63 35541.5 64 29621.0 65 25201.5 66 20782.0 67 17642.0 68 14502.0 69 12836.0 70 11170.0 71 8803.5 72 6437.0 73 5433.5 74 4430.0 75 3510.5 76 2591.0 77 2144.0 78 1697.0 79 1432.0 80 1167.0 81 950.0 82 733.0 83 584.5 84 436.0 85 314.5 86 193.0 87 138.0 88 83.0 89 65.0 90 47.0 91 40.0 92 33.0 93 25.5 94 18.0 95 20.0 96 22.0 97 16.5 98 11.0 99 9.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00983282112006293 2 1.0460448000066946E-4 3 2.0920896000133893E-4 4 0.0 5 0.0 6 1.0460448000066946E-4 7 0.0 8 0.0 9 6.276268800040168E-4 10 9.414403200060251E-4 11 0.0 12 1.0460448000066946E-4 13 5.230224000033473E-4 14 2.0920896000133893E-4 15 0.003347343360021423 16 7.322313600046863E-4 17 0.0 18 2.0920896000133893E-4 19 2.0920896000133893E-4 20 0.0010460448000066947 21 0.0 22 1.0460448000066946E-4 23 8.368358400053557E-4 24 4.1841792000267786E-4 25 0.001359858240008703 26 0.005334828480034143 27 0.006380873280040837 28 0.004602597120029457 29 0.0023012985600147284 30 0.003138134400020084 31 0.007322313600046863 32 0.002928925440018745 33 0.00407957472002611 34 0.0026151120000167368 35 0.0034519478400220926 36 0.007008500160044854 37 0.004602597120029457 38 0.007636127040048871 39 0.004916410560031465 40 0.0024059030400153977 41 0.003556552320022762 42 0.00198748512001272 43 0.00198748512001272 44 0.00198748512001272 45 0.001778276160011381 46 0.0011506492800073642 47 0.0018828806400120503 48 0.0021966940800140587 49 3.138134400020084E-4 50 0.001569067200010042 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 955982.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.81456073762277 #Duplication Level Percentage of deduplicated Percentage of total 1 79.75967060356743 50.10068673540571 2 12.60131007035551 15.830915135759275 3 3.682434403339807 6.939314984727001 4 1.4546891384730003 3.6550263697188967 5 0.726761430697736 2.2825600015162277 6 0.4282640411397447 1.6140730574347364 7 0.2583072675431265 1.1357820282239965 8 0.18947192745339053 0.9521276716076363 9 0.1371412891025863 0.7753022850573261 >10 0.6564359068715384 7.287753453838591 >50 0.054859431527915656 2.4142952981790295 >100 0.04763534837424867 5.819605397503663 >500 0.0030191415540328503 1.1925575810279652 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 1.0460448000066946E-4 0.0 6 0.0 0.0 0.0 1.0460448000066946E-4 2.0920896000133893E-4 7 0.0 0.0 0.0 1.0460448000066946E-4 2.0920896000133893E-4 8 0.0 0.0 0.0 1.0460448000066946E-4 3.1381344000200843E-4 9 0.0 0.0 0.0 1.0460448000066946E-4 4.1841792000267786E-4 10 0.0 0.0 0.0 1.0460448000066946E-4 4.1841792000267786E-4 11 0.0 0.0 0.0 1.0460448000066946E-4 4.1841792000267786E-4 12 0.0 0.0 0.0 1.0460448000066946E-4 7.322313600046863E-4 13 0.0 0.0 0.0 1.0460448000066946E-4 8.368358400053557E-4 14 0.0 0.0 0.0 1.0460448000066946E-4 8.368358400053557E-4 15 0.0 0.0 0.0 1.0460448000066946E-4 8.368358400053557E-4 16 0.0 0.0 0.0 1.0460448000066946E-4 8.368358400053557E-4 17 0.0 0.0 0.0 1.0460448000066946E-4 9.414403200060252E-4 18 0.0 0.0 0.0 1.0460448000066946E-4 9.414403200060252E-4 19 0.0 0.0 0.0 1.0460448000066946E-4 9.414403200060252E-4 20 0.0 0.0 0.0 3.1381344000200843E-4 9.414403200060252E-4 21 0.0 0.0 0.0 5.230224000033473E-4 9.414403200060252E-4 22 0.0 0.0 0.0 0.0010460448000066947 0.0010460448000066947 23 0.0 0.0 0.0 0.0015690672000100421 0.0010460448000066947 24 0.0 0.0 0.0 0.0024059030400153977 0.0010460448000066947 25 0.0 0.0 0.0 0.002928925440018745 0.0012552537600080337 26 0.0 0.0 0.0 0.003556552320022762 0.0012552537600080337 27 0.0 0.0 0.0 0.004602597120029457 0.0012552537600080337 28 0.0 0.0 0.0 0.008263753920052888 0.0012552537600080337 29 0.0 0.0 0.0 0.01579527648010109 0.0012552537600080337 30 0.0 0.0 0.0 0.02772018720017741 0.0012552537600080337 31 0.0 0.0 0.0 0.054185120640346786 0.0012552537600080337 32 0.0 0.0 0.0 0.08441581536054026 0.0012552537600080337 33 0.0 0.0 0.0 0.11349586080072638 0.0012552537600080337 34 0.0 0.0 0.0 0.14299432416091518 0.0012552537600080337 35 0.0 0.0 0.0 0.17489869056111934 0.0012552537600080337 36 0.0 0.0 0.0 0.2213430796814166 0.0012552537600080337 37 0.0 0.0 0.0 0.29331096192187717 0.0012552537600080337 38 0.0 0.0 0.0 0.39530032992252995 0.001359858240008703 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATAGG 110 5.2496034E-9 22.000235 1 ACCGTGT 130 6.91216E-11 21.999084 8 GTATCAA 2070 0.0 20.618576 1 GGATCGT 75 5.4728534E-5 20.532478 6 TAACGGC 85 1.4297459E-4 18.118788 36 TTAACGG 85 1.4297459E-4 18.118788 35 TAATACC 100 2.4830204E-5 17.599268 4 AACGCAG 2420 0.0 17.544724 6 TTATACT 155 1.4386387E-8 17.03155 4 TAGGACG 170 2.4665496E-9 16.822828 4 TAAGACC 105 3.774358E-5 16.761208 4 CCTATAG 105 3.776051E-5 16.76033 3 ACGAACG 110 5.6187575E-5 16.000172 15 GTATAAG 180 5.2605174E-9 15.889059 1 TTACACT 180 5.2641553E-9 15.888228 4 GTTTAAG 140 1.5851056E-6 15.714454 1 CTAGGAC 140 1.5868336E-6 15.71281 3 GTATAGC 115 8.2139144E-5 15.304511 1 ATAGACT 115 8.2175815E-5 15.303712 4 GTAGGAC 230 3.6379788E-11 15.302911 3 >>END_MODULE