##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064120_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1095854 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.350971936042576 32.0 32.0 32.0 32.0 32.0 2 31.497931293767234 32.0 32.0 32.0 32.0 32.0 3 31.53842847678614 32.0 32.0 32.0 32.0 32.0 4 31.59914185648818 32.0 32.0 32.0 32.0 32.0 5 31.592296966566714 32.0 32.0 32.0 32.0 32.0 6 35.185021909852956 36.0 36.0 36.0 36.0 36.0 7 35.185138713733764 36.0 36.0 36.0 36.0 36.0 8 35.14000678922557 36.0 36.0 36.0 36.0 36.0 9 35.21899632615294 36.0 36.0 36.0 36.0 36.0 10 35.11422963277955 36.0 36.0 36.0 36.0 36.0 11 35.219141418473626 36.0 36.0 36.0 36.0 36.0 12 35.15484818233086 36.0 36.0 36.0 36.0 36.0 13 35.17715863609568 36.0 36.0 36.0 36.0 36.0 14 35.13396218839371 36.0 36.0 36.0 36.0 36.0 15 35.12404845901005 36.0 36.0 36.0 36.0 36.0 16 35.141381972416035 36.0 36.0 36.0 36.0 36.0 17 35.13003648296215 36.0 36.0 36.0 36.0 36.0 18 35.107821844880796 36.0 36.0 36.0 36.0 36.0 19 35.095541011850116 36.0 36.0 36.0 36.0 36.0 20 35.091964805530665 36.0 36.0 36.0 36.0 36.0 21 35.09295855104786 36.0 36.0 36.0 36.0 36.0 22 35.06596499168685 36.0 36.0 36.0 36.0 36.0 23 35.0265035305798 36.0 36.0 36.0 36.0 36.0 24 35.02641045248728 36.0 36.0 36.0 36.0 36.0 25 34.99193323198163 36.0 36.0 36.0 36.0 36.0 26 34.94540513608565 36.0 36.0 36.0 36.0 36.0 27 34.923294526460644 36.0 36.0 36.0 36.0 36.0 28 34.90545729631867 36.0 36.0 36.0 36.0 36.0 29 34.888775329560325 36.0 36.0 36.0 36.0 36.0 30 34.872440124323134 36.0 36.0 36.0 36.0 36.0 31 34.86056627981465 36.0 36.0 36.0 36.0 36.0 32 34.83678117705461 36.0 36.0 36.0 32.0 36.0 33 34.83957078223924 36.0 36.0 36.0 32.0 36.0 34 34.83469878286706 36.0 36.0 36.0 36.0 36.0 35 34.80192434393633 36.0 36.0 36.0 32.0 36.0 36 34.79071025884835 36.0 36.0 36.0 32.0 36.0 37 34.76797091583368 36.0 36.0 36.0 32.0 36.0 38 34.750273302830486 36.0 36.0 36.0 32.0 36.0 39 34.7265876658752 36.0 36.0 36.0 32.0 36.0 40 34.73555145119697 36.0 36.0 36.0 32.0 36.0 41 34.70939103201704 36.0 36.0 36.0 32.0 36.0 42 34.68158805826324 36.0 36.0 36.0 32.0 36.0 43 34.67817701993149 36.0 36.0 36.0 32.0 36.0 44 34.64142121121974 36.0 36.0 36.0 32.0 36.0 45 34.62289775827802 36.0 36.0 36.0 32.0 36.0 46 34.602403239847646 36.0 36.0 36.0 32.0 36.0 47 34.59906429141108 36.0 36.0 36.0 32.0 36.0 48 34.56829103146952 36.0 36.0 36.0 32.0 36.0 49 34.550633569800354 36.0 36.0 36.0 32.0 36.0 50 34.00219281035612 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 3.0 18 2.0 19 3.0 20 13.0 21 26.0 22 113.0 23 303.0 24 823.0 25 1862.0 26 3602.0 27 6748.0 28 11160.0 29 17068.0 30 24515.0 31 34660.0 32 49030.0 33 75473.0 34 158116.0 35 712334.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.3018758065311 19.66986754181185 12.627060019603153 26.401196632053896 2 14.176223184033567 21.938423998196832 39.82793249799927 24.057420319770333 3 17.545316503748694 25.482183660507662 29.79847570100963 27.174024134734015 4 11.463753383206157 18.337935527907913 38.167493114958745 32.030817973927185 5 12.54272923217874 38.6205644182528 35.27458949823608 13.562116851332384 6 30.85432078937595 38.261336146362694 18.60641892662611 12.27792413763525 7 28.313012785473962 32.05064912903464 21.94810800353697 17.688230081954423 8 25.584247536624403 36.32564191945277 20.53950617509267 17.550604368830154 9 26.886315520513943 15.388286611184116 19.929277996787853 37.79611987151409 10 14.34458617209415 29.88733777314613 34.24818541359064 21.519890641169074 11 33.9165015745725 23.173363580699235 24.3886725683098 18.52146227641846 12 23.69145075379773 25.772025576469794 30.78338204737688 19.753141622355592 13 28.87394761672717 22.338996537834696 25.750424785964448 23.036631059473685 14 21.601659349674364 22.243534933125034 27.430188958170408 28.724616759030198 15 22.73383500913493 31.06687935871158 23.521026762329416 22.678258869824074 16 22.138227956219968 28.766555762600817 27.11458403674982 21.980632244429398 17 21.686830544944854 28.788141486000875 27.255455562511067 22.269572406543205 18 21.56968849694483 27.895109540739227 29.307531701476847 21.227670260839094 19 23.596756502234786 27.02458539184964 27.495451036360684 21.883207069554885 20 24.504605130479458 27.035350866866874 27.43194052432693 21.02810347832673 21 24.18789364276628 26.69233310276734 26.344020280073803 22.775752974392574 22 23.94789432860337 28.035680065702422 26.51996167358671 21.496463932107496 23 22.528703955497235 28.054318049499837 27.103542298981058 22.313435696021873 24 23.07358880718641 27.420002445599106 27.62377195335841 21.882636793856072 25 22.737389637944013 27.786097232678575 27.411311112632035 22.065202016745374 26 21.829386931151358 28.29682614718836 27.60434253298606 22.269444388674227 27 22.553617498546686 27.864398674540574 27.125284388800214 22.456699438112526 28 21.794944332907466 28.210987406461037 27.05219930644278 22.94186895418872 29 22.684406968361305 27.62258055684836 26.747976382767085 22.94503609202325 30 22.21175792054857 27.639353926713994 27.40162567793617 22.74726247480126 31 23.133771935828605 27.130384311062805 27.02944915505593 22.70639459805266 32 22.186540365670588 27.863332101351073 27.315784430481976 22.63434310249636 33 21.9219411053963 27.99683880458629 27.899192179509175 22.182027910508236 34 22.208047015449758 27.94270904627627 27.954024876575318 21.89521906169865 35 22.46293820524637 27.845282691719785 27.65145258508585 22.040326517947992 36 21.96845248525203 27.61073754453595 28.0426815022487 22.37812846796332 37 22.23217944166768 27.103693286816288 27.099769209499186 23.56435806201685 38 21.97784346597624 27.830096126028863 27.530301191239964 22.66175921675493 39 22.971399368486374 26.724981291865156 27.464910839767104 22.838708499881363 40 23.066835674530278 26.608700254698135 28.081131075088955 22.243332995682632 41 22.86987985891522 26.378109044118652 28.27107260025826 22.48093849670787 42 22.188295629796592 27.36053949973992 28.19780440396777 22.253360466495717 43 21.74900189355052 27.15077681199097 28.366664385280497 22.733556909178017 44 21.495167620731912 27.09225915898076 28.296909120608266 23.11566409967906 45 21.656683348116676 27.091934135649026 28.089992225057216 23.161390291177085 46 21.640131442666306 26.453429746522982 28.47890976685444 23.427529043956273 47 22.117703744870276 26.29886870003166 28.51447182427025 23.06895573082781 48 21.12112587114572 26.81271770087797 28.60424136291586 23.461915065060452 49 21.88486682411 26.397644190231457 28.345001660820333 23.372487324838207 50 21.21306694262087 27.379055586886338 28.163572219880017 23.244305250612776 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 0.5 2 1.0 3 6.5 4 12.0 5 17.5 6 23.0 7 29.5 8 36.0 9 66.0 10 96.0 11 142.5 12 189.0 13 367.0 14 545.0 15 726.0 16 907.0 17 1080.0 18 1253.0 19 1543.5 20 1834.0 21 2414.0 22 2994.0 23 4117.5 24 5241.0 25 7051.0 26 8861.0 27 11783.0 28 14705.0 29 18879.5 30 23054.0 31 28091.0 32 33128.0 33 40273.0 34 47418.0 35 55041.0 36 62664.0 37 67310.5 38 71957.0 39 74934.5 40 77912.0 41 80086.0 42 82260.0 43 84598.0 44 86936.0 45 88677.5 46 90419.0 47 90661.5 48 90904.0 49 89725.5 50 88547.0 51 83972.0 52 79397.0 53 73222.0 54 67047.0 55 60173.5 56 53300.0 57 46741.5 58 40183.0 59 33630.5 60 27078.0 61 21640.5 62 16203.0 63 12941.5 64 9680.0 65 7387.5 66 5095.0 67 3869.0 68 2643.0 69 1989.5 70 1336.0 71 1017.5 72 699.0 73 557.5 74 416.0 75 318.0 76 220.0 77 223.0 78 226.0 79 175.0 80 124.0 81 107.5 82 91.0 83 79.0 84 67.0 85 59.0 86 51.0 87 46.5 88 42.0 89 35.0 90 28.0 91 21.0 92 14.0 93 12.5 94 11.0 95 6.5 96 2.0 97 3.0 98 4.0 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01022033957078224 2 4.562651594099214E-4 3 5.475181912919057E-4 4 0.0 5 0.0 6 9.125303188198428E-5 7 9.125303188198428E-5 8 0.0 9 0.00127754244634778 10 0.0010950363825838114 11 9.125303188198428E-5 12 2.7375909564595285E-4 13 7.300242550558742E-4 14 2.7375909564595285E-4 15 0.005475181912919057 16 0.0010950363825838114 17 0.0 18 5.475181912919057E-4 19 0.0 20 0.001003783350701827 21 0.0 22 3.650121275279371E-4 23 0.0010950363825838114 24 7.300242550558742E-4 25 0.0026463379245775438 26 0.008030266805614616 27 0.007574001646204695 28 0.004927663721627151 29 0.004015133402807308 30 0.005931447072328978 31 0.009216556220080413 32 0.005383928881037073 33 0.0060227001042109625 34 0.004015133402807308 35 0.004471398562217229 36 0.01003783350701827 37 0.005018916753509135 38 0.00958156834760835 39 0.006752724359266837 40 0.004288892498453261 41 0.005383928881037073 42 0.0021900727651676228 43 0.0026463379245775438 44 0.0015513015419937328 45 0.0023725788289315915 46 0.0013687954782297643 47 0.0031938561158694496 48 0.0024638318608135755 49 9.125303188198428E-4 50 0.0018250606376396855 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1095854.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.67699720584258 #Duplication Level Percentage of deduplicated Percentage of total 1 68.89962625369932 40.42823177171913 2 16.358225355902107 19.197030870016224 3 6.758811092373245 11.89760218746008 4 3.3290550495242335 7.813558153561184 5 1.7832861185485276 5.231893729764491 6 1.0120123130460743 3.562910619892968 7 0.6157263611408279 2.529028178055679 8 0.38450500539655647 1.8049279301828987 9 0.22981211550871095 1.2136216373616064 >10 0.6094941426406558 5.038949288960771 >50 0.013492535450108117 0.5329979855749089 >100 0.005326956978616642 0.49202147854476364 >500 6.2669979104105E-4 0.25722616890528566 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 9.125303188198428E-5 0.0 4 0.0 0.0 0.0 9.125303188198428E-5 0.0 5 0.0 0.0 0.0 9.125303188198428E-5 0.0 6 0.0 0.0 0.0 9.125303188198428E-5 0.0 7 0.0 0.0 0.0 1.8250606376396856E-4 0.0 8 0.0 0.0 0.0 1.8250606376396856E-4 0.0 9 0.0 0.0 0.0 5.475181912919057E-4 0.0 10 0.0 0.0 0.0 5.475181912919057E-4 0.0 11 0.0 0.0 0.0 8.212772869378585E-4 0.0 12 0.0 0.0 0.0 8.212772869378585E-4 0.0 13 0.0 0.0 0.0 8.212772869378585E-4 0.0 14 0.0 0.0 0.0 8.212772869378585E-4 0.0 15 0.0 0.0 0.0 8.212772869378585E-4 0.0 16 0.0 0.0 0.0 0.001003783350701827 0.0 17 0.0 0.0 0.0 0.001003783350701827 0.0 18 0.0 0.0 0.0 0.0014600485101117484 0.0 19 0.0 0.0 0.0 0.0015513015419937328 0.0 20 0.0 0.0 0.0 0.0015513015419937328 0.0 21 0.0 0.0 0.0 0.0018250606376396855 0.0 22 0.0 0.0 0.0 0.002281325797049607 0.0 23 0.0 0.0 0.0 0.0024638318608135755 0.0 24 0.0 0.0 0.0 0.0028288439883415125 0.0 25 0.0 0.0 0.0 0.0030113500521054813 0.0 26 0.0 0.0 0.0 0.0034676152115154027 0.0 27 0.0 0.0 0.0 0.004562651594099214 0.0 28 0.0 0.0 0.0 0.010767857762074146 0.0 29 0.0 0.0 0.0 0.022995764034260038 0.0 30 0.0 0.0 0.0 0.05210548120461302 0.0 31 0.0 0.0 0.0 0.13961713877943593 0.0 32 0.0 0.0 0.0 0.23689287076563117 0.0 33 0.0 0.0 0.0 0.34046506195168336 0.0 34 0.0 0.0 0.0 0.45115498962453027 0.0 35 0.0 0.0 0.0 0.5811905600563578 0.0 36 0.0 0.0 0.0 0.7639703829159724 0.0 37 0.0 0.0 0.0 1.0429309013791983 0.0 38 0.0 0.0 0.0 1.4424366749585256 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 675 0.0 32.58864 1 AAGTCCG 35 3.2199576E-4 31.424757 5 CTCGATA 30 0.0057456256 29.33245 12 GTATCAA 1775 0.0 26.892513 1 CGTCGTA 50 8.3424355E-5 26.399206 10 CCGTCGT 55 1.5933171E-4 24.000374 9 GTCGTAG 60 2.873124E-4 21.999338 11 ACCGTCG 60 2.874898E-4 21.997332 8 CGCGGTT 65 4.9327576E-4 20.307083 10 TACCGTC 65 4.935794E-4 20.30523 7 TAGGACG 1080 0.0 20.16422 4 GCACGAC 55 0.004487682 19.99666 16 TTAGGAC 760 0.0 19.97126 3 GACGTGA 650 0.0 19.966806 7 TAGGACC 475 0.0 19.913374 4 CGAACTC 100 1.1240554E-6 19.798502 20 AGGACGT 1100 0.0 19.59762 5 ATGTCGA 80 8.999123E-5 19.246786 17 GACCGCG 70 8.129289E-4 18.854855 7 GTCCTAC 900 0.0 18.819939 1 >>END_MODULE