##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064118_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1137702 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.260647339988854 32.0 32.0 32.0 32.0 32.0 2 31.438568271832168 32.0 32.0 32.0 32.0 32.0 3 31.496565005599006 32.0 32.0 32.0 32.0 32.0 4 31.58251721452542 32.0 32.0 32.0 32.0 32.0 5 31.532069030378782 32.0 32.0 32.0 32.0 32.0 6 35.118799123144726 36.0 36.0 36.0 36.0 36.0 7 35.13860747366182 36.0 36.0 36.0 36.0 36.0 8 35.098323638351694 36.0 36.0 36.0 36.0 36.0 9 35.181032467201426 36.0 36.0 36.0 36.0 36.0 10 35.048512703678114 36.0 36.0 36.0 36.0 36.0 11 35.18577448224579 36.0 36.0 36.0 36.0 36.0 12 35.09496950871142 36.0 36.0 36.0 36.0 36.0 13 35.13102024959084 36.0 36.0 36.0 36.0 36.0 14 35.07134557203908 36.0 36.0 36.0 36.0 36.0 15 35.058153189499535 36.0 36.0 36.0 36.0 36.0 16 35.061518745682086 36.0 36.0 36.0 36.0 36.0 17 35.0199085525032 36.0 36.0 36.0 36.0 36.0 18 35.00843103026979 36.0 36.0 36.0 36.0 36.0 19 35.012344181516774 36.0 36.0 36.0 36.0 36.0 20 34.99560078122391 36.0 36.0 36.0 36.0 36.0 21 35.000180187782036 36.0 36.0 36.0 36.0 36.0 22 34.99654391044403 36.0 36.0 36.0 36.0 36.0 23 34.94248318100873 36.0 36.0 36.0 36.0 36.0 24 34.909344450480006 36.0 36.0 36.0 32.0 36.0 25 34.881934812455285 36.0 36.0 36.0 32.0 36.0 26 34.82502799502858 36.0 36.0 36.0 32.0 36.0 27 34.82106825864769 36.0 36.0 36.0 32.0 36.0 28 34.798028833560984 36.0 36.0 36.0 32.0 36.0 29 34.760066344262384 36.0 36.0 36.0 32.0 36.0 30 34.73571901956751 36.0 36.0 36.0 32.0 36.0 31 34.7285668830678 36.0 36.0 36.0 32.0 36.0 32 34.683601681283854 36.0 36.0 36.0 32.0 36.0 33 34.63991801016435 36.0 36.0 36.0 32.0 36.0 34 34.63127954420402 36.0 36.0 36.0 32.0 36.0 35 34.57765917612872 36.0 36.0 36.0 32.0 36.0 36 34.54544335862994 36.0 36.0 36.0 32.0 36.0 37 34.53900669946963 36.0 36.0 36.0 32.0 36.0 38 34.49159094384997 36.0 36.0 36.0 32.0 36.0 39 34.489117536929704 36.0 36.0 36.0 32.0 36.0 40 34.4601908056767 36.0 36.0 36.0 32.0 36.0 41 34.4327706200745 36.0 36.0 36.0 32.0 36.0 42 34.36934979458593 36.0 36.0 36.0 32.0 36.0 43 34.34140310907426 36.0 36.0 36.0 32.0 36.0 44 34.26994415057722 36.0 36.0 36.0 32.0 36.0 45 34.22669820392335 36.0 36.0 36.0 32.0 36.0 46 34.177803150561395 36.0 36.0 36.0 32.0 36.0 47 34.129077737403996 36.0 36.0 36.0 32.0 36.0 48 34.06989791702924 36.0 36.0 36.0 32.0 36.0 49 34.040321630796115 36.0 36.0 36.0 32.0 36.0 50 33.4582263193701 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 3.0 20 17.0 21 62.0 22 162.0 23 452.0 24 1136.0 25 2502.0 26 4941.0 27 8945.0 28 14397.0 29 21471.0 30 29977.0 31 40926.0 32 57942.0 33 90652.0 34 185110.0 35 679005.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.21018765059208 17.73718720139804 11.733897800004044 26.318727348005833 2 16.023099336816983 20.884331916726364 36.85486883567213 26.237699910784524 3 18.19009647568419 24.8387970072849 28.71056943155289 28.26053708547802 4 12.306825513183593 16.184202893200506 35.7051319238254 35.803839669790506 5 14.16794556043674 37.077987029995555 33.184964076709015 15.569103332858692 6 33.60601774983058 35.664906684621 17.08076199282588 13.648313572722534 7 29.82338944942476 30.76335522250574 21.026438405169724 18.38681692289978 8 28.120896333134688 32.312591522208805 19.708148530986147 19.858363613670363 9 27.856719692428317 14.036210342748351 18.4911302415605 39.615939723262834 10 15.949276075690348 26.799438861972703 31.643473430325365 25.60781163201159 11 36.99351851363538 21.184985171863985 22.670523564167066 19.150972750333565 12 25.15001744746643 23.88536179541022 28.619294524659818 22.345326232463538 13 29.669215982195517 19.597764243542404 25.27461322977856 25.45840654448352 14 23.860068559374177 19.477542410125693 25.789048079458553 30.873340951041573 15 25.259964804764895 26.818610930915725 22.978867036902255 24.942557227417122 16 25.503123868322884 25.639979889108826 23.932927365227144 24.923968877341142 17 23.83356977486196 25.516611555574308 25.47468493507087 25.175133734492867 18 24.51612733102692 24.68506525469018 26.587067195454672 24.21174021882823 19 25.26865558819445 24.632900355277567 26.192095997018548 23.906348059509433 20 25.90230765038754 23.747774006015675 25.662172781081733 24.68774556251505 21 26.836552981360672 23.924718423629386 25.179001179570747 24.05972741543919 22 25.837456414295147 24.08998497847853 25.512678638763614 24.559879968462717 23 24.561371125602424 23.973954309290818 25.965176897458274 25.49949766764848 24 24.621669917385734 24.635118137781852 25.929223686095682 24.813988258736728 25 24.86454938278116 24.17314473966409 26.072969295516152 24.8893365820386 26 24.56358718630975 24.974794022996992 26.183889798677423 24.277728992015838 27 25.079113367697836 24.520836702976773 25.552387114014667 24.847662815310724 28 24.408885419715745 24.527376434879606 26.201984988208032 24.861753157196613 29 24.321917766075362 24.847207901854425 26.101100771146314 24.7297735609239 30 24.36990449569066 24.919900320398717 26.26012508295646 24.450070100954164 31 24.773385747035906 24.773913165778257 25.357238294820046 25.09546279236579 32 24.64938596946153 24.852876155784703 25.28613884623262 25.21159902852115 33 24.424791518515228 24.4201327143863 25.782788971116293 25.37228679598218 34 24.965345198738802 24.56205736567254 25.82307899888278 24.649518436705872 35 25.5439927640502 24.400586118965975 25.904999151762443 24.15042196522138 36 24.506987529865558 25.089442843605564 25.44818116768841 24.95538845884047 37 25.151849175751245 25.0863628452536 25.385050833214667 24.376737145780485 38 24.397797145783066 24.905701841132544 25.783854819073238 24.912646194011153 39 24.937809523976956 24.889463570884836 25.318863536075746 24.853863369062456 40 25.253961822003024 24.966620402559265 25.576990184332725 24.202427591104986 41 24.250742752667755 25.343687920819928 25.90273016542728 24.502839161085035 42 25.251696877323816 25.420110083872586 25.361569793913567 23.96662324489003 43 24.67260327313224 24.57732223361962 25.57724576267462 25.17282873057352 44 24.435762095834964 25.2627045271758 25.25242048545951 25.049112891529727 45 24.54128258926256 25.393628981007893 25.22249167826187 24.842596751467678 46 24.308531256839537 25.188650305400344 25.289205203188576 25.213613234571547 47 24.30595354037529 25.207792025146 25.659238658458122 24.827015776020588 48 25.140592889753023 25.548791314268836 24.816688670472065 24.493927125506072 49 24.3381360222766 25.704493994880885 24.852508930329368 25.10486105251315 50 24.408974724088587 25.971798847483136 24.846881910970005 24.772344517458276 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 270.0 1 173.0 2 76.0 3 241.0 4 406.0 5 450.5 6 495.0 7 441.0 8 387.0 9 526.5 10 666.0 11 992.5 12 1319.0 13 2459.5 14 3600.0 15 4531.5 16 5463.0 17 5636.5 18 5810.0 19 5747.0 20 5684.0 21 5859.5 22 6035.0 23 6463.0 24 6891.0 25 7014.5 26 7138.0 27 8431.0 28 9724.0 29 11346.0 30 12968.0 31 15272.5 32 17577.0 33 20386.0 34 23195.0 35 26423.5 36 29652.0 37 34760.0 38 39868.0 39 43544.0 40 47220.0 41 52290.0 42 57360.0 43 59718.5 44 62077.0 45 68322.0 46 74567.0 47 78785.0 48 83003.0 49 85124.0 50 87245.0 51 85124.5 52 83004.0 53 82670.5 54 82337.0 55 81498.5 56 80660.0 57 78481.0 58 76302.0 59 69582.5 60 62863.0 61 55349.0 62 47835.0 63 41885.0 64 35935.0 65 30589.5 66 25244.0 67 21579.0 68 17914.0 69 15963.5 70 14013.0 71 11010.0 72 8007.0 73 6875.0 74 5743.0 75 4521.5 76 3300.0 77 2817.5 78 2335.0 79 1921.0 80 1507.0 81 1203.5 82 900.0 83 753.0 84 606.0 85 426.0 86 246.0 87 179.5 88 113.0 89 81.5 90 50.0 91 45.0 92 40.0 93 26.5 94 13.0 95 15.5 96 18.0 97 14.5 98 11.0 99 10.5 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009580716215669834 2 6.152753532998975E-4 3 5.27378874257055E-4 4 0.0 5 0.0 6 8.789647904284249E-5 7 8.789647904284249E-5 8 0.0 9 0.0014063436646854798 10 0.001230550706599795 11 0.0 12 8.789647904284249E-5 13 9.668612694712674E-4 14 1.7579295808568498E-4 15 0.00421903099405644 16 8.78964790428425E-4 17 0.0 18 5.27378874257055E-4 19 0.0 20 7.031718323427399E-4 21 0.0 22 8.789647904284249E-5 23 7.910683113855825E-4 24 4.394823952142125E-4 25 0.001582136622771165 26 0.006592235928213187 27 0.008262269030027195 28 0.005537478179699078 29 0.003955341556927913 30 0.005010099305442023 31 0.007559097197684455 32 0.004834306347356337 33 0.006240650012041818 34 0.004658513389270653 35 0.004306927473099283 36 0.00914123382045562 37 0.00527378874257055 38 0.007646993676727298 39 0.0059769605749132905 40 0.0027247908503281178 41 0.0036916521197993854 42 0.00210951549702822 43 0.0013184471856426375 44 0.0014942401437283226 45 0.0016700331018140075 46 0.0013184471856426375 47 0.002285308455113905 48 0.00175792958085685 49 5.27378874257055E-4 50 0.001582136622771165 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1137702.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.424601649539746 #Duplication Level Percentage of deduplicated Percentage of total 1 77.41859026126153 45.23150296283142 2 13.651290819255932 15.951424562340938 3 4.278755403200293 7.4995373996337875 4 1.695348153097625 3.9620016200804673 5 0.8805035632697529 2.572153496751781 6 0.5022243691832364 1.7605355224933184 7 0.3242526456357349 1.326103215855403 8 0.22399432307001801 1.046942327769929 9 0.14831491384422035 0.7798715784030944 >10 0.7484257888496767 7.617092265537156 >50 0.05970284433924131 2.4574791213583094 >100 0.0625397960705397 7.238096178739825 >500 0.005602835003038019 2.234959202876467 >1k 4.5428391916524477E-4 0.32230054532812 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1432 0.12586775798935046 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1151 0.10116884737831174 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.78964790428425E-5 2 0.0 0.0 0.0 0.0 8.78964790428425E-5 3 0.0 0.0 0.0 0.0 8.78964790428425E-5 4 0.0 0.0 0.0 0.0 8.78964790428425E-5 5 0.0 0.0 0.0 1.75792958085685E-4 8.78964790428425E-5 6 0.0 0.0 0.0 1.75792958085685E-4 8.78964790428425E-5 7 0.0 0.0 0.0 1.75792958085685E-4 8.78964790428425E-5 8 0.0 0.0 0.0 2.636894371285275E-4 8.78964790428425E-5 9 0.0 0.0 0.0 2.636894371285275E-4 8.78964790428425E-5 10 0.0 0.0 0.0 2.636894371285275E-4 8.78964790428425E-5 11 0.0 0.0 0.0 2.636894371285275E-4 8.78964790428425E-5 12 0.0 0.0 0.0 2.636894371285275E-4 5.27378874257055E-4 13 0.0 0.0 0.0 2.636894371285275E-4 6.152753532998976E-4 14 0.0 0.0 0.0 2.636894371285275E-4 6.152753532998976E-4 15 0.0 0.0 0.0 2.636894371285275E-4 7.0317183234274E-4 16 0.0 0.0 0.0 2.636894371285275E-4 7.0317183234274E-4 17 0.0 0.0 0.0 2.636894371285275E-4 7.0317183234274E-4 18 0.0 0.0 0.0 2.636894371285275E-4 7.0317183234274E-4 19 0.0 0.0 0.0 2.636894371285275E-4 7.0317183234274E-4 20 0.0 0.0 0.0 3.5158591617137E-4 0.0013184471856426375 21 0.0 0.0 0.0 4.3948239521421253E-4 0.00140634366468548 22 0.0 0.0 0.0 7.910683113855825E-4 0.001582136622771165 23 0.0 0.0 0.0 0.00210951549702822 0.001582136622771165 24 0.0 0.0 0.0 0.00421903099405644 0.0016700331018140075 25 0.0 0.0 0.0 0.005185892263527708 0.0016700331018140075 26 0.0 0.0 0.0 0.00632854649108466 0.0020216190179853776 27 0.0 0.0 0.0 0.00843806198811288 0.0021974119760710628 28 0.0 0.0 0.0 0.012041817628869423 0.002285308455113905 29 0.0 0.0 0.0 0.018809846515168295 0.0023732049341567475 30 0.0 0.0 0.0 0.036301245844693956 0.0023732049341567475 31 0.0 0.0 0.0 0.07752469451578708 0.0023732049341567475 32 0.0 0.0 0.0 0.12156083051625118 0.0023732049341567475 33 0.0 0.0 0.0 0.16603644891192948 0.0023732049341567475 34 0.0 0.0 0.0 0.21103944618186485 0.0024611014131995903 35 0.0 0.0 0.0 0.26114043923628505 0.0024611014131995903 36 0.0 0.0 0.0 0.33128182951247337 0.0024611014131995903 37 0.0 0.0 0.0 0.43851553394474124 0.0024611014131995903 38 0.0 0.0 0.0 0.5906643391679016 0.002636894371285275 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTGCGA 60 2.8728077E-4 21.999802 10 CGGTACT 60 0.0074159824 18.331558 4 ACCGTCG 265 0.0 18.26238 8 GTATTAG 275 0.0 17.598295 1 CGTCGTA 290 0.0 17.448118 10 TAATACT 190 3.274181E-11 17.366737 4 CCGTCGT 280 0.0 17.285559 9 TACCGTC 280 0.0 17.28404 7 ATACCGT 285 0.0 16.980812 6 CGAACTC 160 2.1300366E-8 16.499126 20 TACCGTG 80 0.001989541 16.498402 7 CGCAATA 270 0.0 16.297583 36 GTATAGT 95 3.3485677E-4 16.208956 1 GTATCAA 3350 0.0 16.022327 1 ATCGCTC 165 3.111745E-8 15.999153 16 ATGGGTG 675 0.0 15.968823 5 GTATAGA 125 9.447893E-6 15.838465 1 GTAAGAC 125 9.447893E-6 15.838465 3 TAGACAG 265 0.0 15.772057 5 GTATTAC 140 1.5875303E-6 15.712764 1 >>END_MODULE