##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064116_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6194400 Sequences flagged as poor quality 0 Sequence length 25 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.303193529639675 32.0 32.0 32.0 32.0 32.0 2 30.883038066640836 32.0 32.0 32.0 32.0 32.0 3 30.907639157949117 32.0 32.0 32.0 32.0 32.0 4 30.943163018209997 32.0 32.0 32.0 32.0 32.0 5 30.829339564768176 32.0 32.0 32.0 32.0 32.0 6 34.504235922768956 36.0 36.0 36.0 32.0 36.0 7 34.457335819449824 36.0 36.0 36.0 32.0 36.0 8 34.41498579362004 36.0 36.0 36.0 32.0 36.0 9 34.574213967454476 36.0 36.0 36.0 32.0 36.0 10 34.25253277153558 36.0 36.0 36.0 32.0 36.0 11 34.5349428516079 36.0 36.0 36.0 32.0 36.0 12 34.346297462223944 36.0 36.0 36.0 32.0 36.0 13 34.437208607774764 36.0 36.0 36.0 32.0 36.0 14 34.326896713160274 36.0 36.0 36.0 32.0 36.0 15 34.25349428516079 36.0 36.0 36.0 32.0 36.0 16 34.25674867622369 36.0 36.0 36.0 32.0 36.0 17 34.17853286839726 36.0 36.0 36.0 32.0 36.0 18 34.17515465581816 36.0 36.0 36.0 32.0 36.0 19 34.19944917990443 36.0 36.0 36.0 32.0 36.0 20 34.1862351478755 36.0 36.0 36.0 32.0 36.0 21 34.16899312282061 36.0 36.0 36.0 32.0 36.0 22 34.14727495802661 36.0 36.0 36.0 32.0 36.0 23 34.08281157174222 36.0 36.0 36.0 32.0 36.0 24 34.06773149941883 36.0 36.0 36.0 32.0 36.0 25 33.663547236213354 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 2.0 3 17.0 4 64.0 5 70.0 6 243.0 7 85.0 8 345.0 9 394.0 10 529.0 11 186.0 12 382.0 13 310.0 14 473.0 15 830.0 16 1546.0 17 2062.0 18 2654.0 19 3701.0 20 5577.0 21 8266.0 22 13099.0 23 20488.0 24 30792.0 25 45398.0 26 64773.0 27 86598.0 28 119620.0 29 162392.0 30 214249.0 31 293672.0 32 418325.0 33 596663.0 34 1287574.0 35 2813021.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.93643365207324 16.731963423049823 11.055352667891583 26.276250256985357 2 17.244978961386884 19.006239337613437 36.74036221964593 27.00841948135375 3 19.10649280538664 22.719031262193695 28.148711869501685 30.025764062917975 4 12.685768143017617 15.121858606497165 35.29400178813996 36.89837146234525 5 15.087859052242381 35.909074837407026 33.39522277049088 15.60784333985971 6 35.33119218595303 34.8985172349878 16.3953420034087 13.374948575650466 7 31.32964152181864 29.935112066313742 20.05470705968124 18.680539352186383 8 28.805946431472535 32.37794599608735 18.819250226655456 19.99685734578466 9 27.28948085465704 14.097880768795298 18.085541616213202 40.52709676033446 10 15.88769422218087 26.26840458689989 31.13617068291775 26.707730508001486 11 37.7894207893389 20.753044445438714 22.091158028818796 19.36637673640359 12 25.20927362425409 23.178099850414995 28.151445934550907 23.461180590780007 13 29.5414990008707 19.004957684410837 25.025386122683706 26.428157192034753 14 23.970245284006428 19.23803255849719 24.550063875033683 32.2416582824627 15 25.601302213695437 26.777342554277883 21.6104701754522 26.01088505657448 16 26.464560308417763 25.546818775488443 22.869406273196553 25.11921464289724 17 24.57845809102168 25.679281653139856 24.484039940250838 25.25822031558762 18 25.475755724174608 24.685077902929837 25.201118775189325 24.638047597706226 19 25.9669936412895 24.6067346206495 24.77651456587208 24.64975717218892 20 26.122704582361184 24.132334192483306 24.16934878392284 25.57561244123267 21 27.248788885632614 24.01315141118694 23.883323957624164 24.854735745556287 22 26.447145550155067 23.8458153110623 24.388292939535 25.318746199247638 23 24.886306994945272 23.806564764256766 24.935408219567623 26.371720021230345 24 25.18629205818978 24.6569532905875 24.569564894971556 25.58718975625116 25 25.34960411186621 24.083443883440683 24.726759071530967 25.840192933162143 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 186.0 1 186.0 2 552.0 3 918.0 4 918.0 5 918.0 6 2498.0 7 4078.0 8 4078.0 9 4078.0 10 5352.5 11 6627.0 12 6627.0 13 6627.0 14 9689.0 15 12751.0 16 12751.0 17 12751.0 18 22314.0 19 31877.0 20 31877.0 21 31877.0 22 51671.0 23 71465.0 24 71465.0 25 71465.0 26 108678.5 27 145892.0 28 145892.0 29 145892.0 30 185120.5 31 224349.0 32 224349.0 33 224349.0 34 291133.0 35 357917.0 36 357917.0 37 357917.0 38 418795.0 39 479673.0 40 479673.0 41 479673.0 42 558628.0 43 637583.0 44 637583.0 45 637583.0 46 714825.0 47 792067.0 48 792067.0 49 792067.0 50 822031.5 51 851996.0 52 851996.0 53 851996.0 54 806128.0 55 760260.0 56 760260.0 57 760260.0 58 704802.0 59 649344.0 60 649344.0 61 649344.0 62 574981.0 63 500618.0 64 500618.0 65 500618.0 66 412327.5 67 324037.0 68 324037.0 69 324037.0 70 244016.5 71 163996.0 72 163996.0 73 163996.0 74 125469.5 75 86943.0 76 86943.0 77 86943.0 78 69693.0 79 52443.0 80 52443.0 81 52443.0 82 35769.0 83 19095.0 84 19095.0 85 19095.0 86 14871.0 87 10647.0 88 10647.0 89 10647.0 90 7564.0 91 4481.0 92 4481.0 93 4481.0 94 3121.0 95 1761.0 96 1761.0 97 1761.0 98 2578.5 99 3396.0 100 3396.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03895453958414052 2 0.005052951052563606 3 0.0018242283352705672 4 0.004100477850962159 5 0.009024279994834043 6 0.013496060958284904 7 0.02284321322484825 8 0.03522536484566705 9 0.04925416505230531 10 0.057342115459124376 11 0.05442012139997417 12 0.06360583753067287 13 0.06473589048172543 14 0.06760945370011623 15 0.05990895001937234 16 0.06610809763657498 17 0.06220134314865039 18 0.07706961126178484 19 0.07463192561022859 20 0.07989474363941625 21 0.0750032287227173 22 0.07807051530414569 23 0.08305889190236343 24 0.07734405269275475 25 0.07908756296009299 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 6194400.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.65569517600627 #Duplication Level Percentage of deduplicated Percentage of total 1 64.59307444217227 21.739248239068313 2 16.036669534845007 10.794505230061798 3 6.999157077251682 7.066844912429087 4 3.575218784035789 4.813058943321613 5 2.1909478576612194 3.6868936621984982 6 1.3821155697384402 2.7909636187877505 7 0.9671214362559345 2.2784400979767776 8 0.7068419344641541 1.9031405347155337 9 0.5294477232248437 1.6037038066037286 >10 2.6777836489642755 16.174050053093257 >50 0.1916703394069104 4.464417076648907 >100 0.1182485335565188 8.03030893594806 >500 0.01724882284723966 4.094423560711865 >1k 0.01358703784110028 8.799484908988095 >5k 8.672577345291137E-4 1.7605164194467842 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 8268 0.13347539713289425 No Hit GCGCAAGACGGACCAGAGCGAAAGC 7188 0.1160402944595118 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 7073 0.11418377889706832 No Hit GGGTAGGCACACGCTGAGCCAGTCA 6808 0.10990572129665505 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 6655 0.10743574841792587 No Hit GAATAGGACCGCGGTTCTATTTTGT 6241 0.10075229239312929 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.8430840759395585E-5 2 0.0 0.0 0.0 0.0 4.8430840759395585E-5 3 0.0 0.0 0.0 0.0 4.8430840759395585E-5 4 0.0 0.0 0.0 0.0 4.8430840759395585E-5 5 0.0 0.0 0.0 0.0 4.8430840759395585E-5 6 0.0 0.0 0.0 0.0 6.457445434586077E-5 7 0.0 0.0 0.0 0.0 6.457445434586077E-5 8 0.0 0.0 0.0 0.0 6.457445434586077E-5 9 0.0 0.0 0.0 0.0 6.457445434586077E-5 10 0.0 0.0 0.0 0.0 6.457445434586077E-5 11 0.0 0.0 0.0 3.228722717293039E-5 6.457445434586077E-5 12 0.0 0.0 0.0 3.228722717293039E-5 1.4529252227818675E-4 13 0.0 0.0 0.0 4.8430840759395585E-5 1.6143613586465193E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 6510 0.0 12.795871 1 GGTATCA 2575 0.0 12.65226 1 GCGTTAT 655 0.0 12.471204 1 AAGACGG 1405 0.0 12.169675 5 CCGGTTA 55 0.0030682993 12.091921 14 CGATCCG 95 1.0408821E-6 12.00052 10 CGCCAGT 905 0.0 11.968433 18 CGAACGA 510 0.0 11.736562 16 CAAGACG 1485 0.0 11.641157 4 CGGTCCA 1285 0.0 11.607508 10 ACCGTCG 1085 0.0 11.383349 8 CGTTATT 680 0.0 11.172713 2 TCGGCGT 895 0.0 11.039674 13 ACTCTAA 915 0.0 11.005942 10 ACGGTAT 1045 0.0 11.000655 9 ATCGCCA 985 0.0 10.996112 16 CGCATCG 970 0.0 10.969637 13 ATCCCGA 460 0.0 10.946835 16 CGAGCCG 1420 0.0 10.906108 15 CGACCAT 1165 0.0 10.845964 10 >>END_MODULE