##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064115_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1501717 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.2932410034647 32.0 32.0 32.0 32.0 32.0 2 31.392974175560376 32.0 32.0 32.0 32.0 32.0 3 31.46735836379291 32.0 32.0 32.0 32.0 32.0 4 31.552342418711383 32.0 32.0 32.0 32.0 32.0 5 31.499402350775814 32.0 32.0 32.0 32.0 32.0 6 35.0782937131297 36.0 36.0 36.0 36.0 36.0 7 35.09482678826969 36.0 36.0 36.0 36.0 36.0 8 35.043733273313144 36.0 36.0 36.0 36.0 36.0 9 35.152256383859275 36.0 36.0 36.0 36.0 36.0 10 35.01183445349557 36.0 36.0 36.0 36.0 36.0 11 35.16090115514441 36.0 36.0 36.0 36.0 36.0 12 35.06936593246264 36.0 36.0 36.0 36.0 36.0 13 35.10713137029148 36.0 36.0 36.0 36.0 36.0 14 35.05119872785618 36.0 36.0 36.0 36.0 36.0 15 35.02553743481628 36.0 36.0 36.0 36.0 36.0 16 35.04176419391936 36.0 36.0 36.0 36.0 36.0 17 35.00194777045209 36.0 36.0 36.0 36.0 36.0 18 35.00211824198568 36.0 36.0 36.0 36.0 36.0 19 34.99158097031598 36.0 36.0 36.0 36.0 36.0 20 34.983940382908365 36.0 36.0 36.0 36.0 36.0 21 34.9828236611825 36.0 36.0 36.0 36.0 36.0 22 34.967940031310825 36.0 36.0 36.0 36.0 36.0 23 34.918776307386814 36.0 36.0 36.0 32.0 36.0 24 34.908404845919705 36.0 36.0 36.0 32.0 36.0 25 34.87070999396025 36.0 36.0 36.0 32.0 36.0 26 34.81402487952124 36.0 36.0 36.0 32.0 36.0 27 34.813941641467736 36.0 36.0 36.0 32.0 36.0 28 34.788355595628204 36.0 36.0 36.0 32.0 36.0 29 34.75846913899223 36.0 36.0 36.0 32.0 36.0 30 34.74209521501055 36.0 36.0 36.0 32.0 36.0 31 34.72656565784366 36.0 36.0 36.0 32.0 36.0 32 34.686811163488194 36.0 36.0 36.0 32.0 36.0 33 34.64898113292984 36.0 36.0 36.0 32.0 36.0 34 34.63677110933685 36.0 36.0 36.0 32.0 36.0 35 34.60253962630775 36.0 36.0 36.0 32.0 36.0 36 34.562175163496185 36.0 36.0 36.0 32.0 36.0 37 34.554776965300384 36.0 36.0 36.0 32.0 36.0 38 34.514980518965956 36.0 36.0 36.0 32.0 36.0 39 34.50597882290738 36.0 36.0 36.0 32.0 36.0 40 34.48059521201398 36.0 36.0 36.0 32.0 36.0 41 34.455019820645305 36.0 36.0 36.0 32.0 36.0 42 34.387654265084564 36.0 36.0 36.0 32.0 36.0 43 34.38195612089362 36.0 36.0 36.0 32.0 36.0 44 34.309008288512416 36.0 36.0 36.0 32.0 36.0 45 34.27539143527043 36.0 36.0 36.0 32.0 36.0 46 34.242223401612954 36.0 36.0 36.0 32.0 36.0 47 34.20312748673685 36.0 36.0 36.0 32.0 36.0 48 34.14034601725891 36.0 36.0 36.0 32.0 36.0 49 34.110293750420354 36.0 36.0 36.0 32.0 36.0 50 33.51278037073563 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 2.0 19 6.0 20 13.0 21 40.0 22 176.0 23 492.0 24 1255.0 25 2922.0 26 5834.0 27 10904.0 28 18024.0 29 27126.0 30 38762.0 31 54627.0 32 78532.0 33 125684.0 34 260115.0 35 877202.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.21304274280661 18.49371264782703 12.20709303363244 26.086151575733922 2 15.333699138050438 21.001430367473922 38.00555632504768 25.65931416942796 3 17.680734203986397 25.53911945597946 29.253689798549388 27.526456541484762 4 11.968366876049217 16.642216875749558 36.91894011987611 34.47047612832511 5 13.587846445102505 37.655563598201255 33.70681693022054 15.049773026475693 6 32.53067326356865 36.79439840449086 17.510845932816814 13.16408239912367 7 29.24594264161799 31.210694964960084 21.45432292124476 18.089039472177163 8 27.533816291618194 33.36420910198127 19.85320802787742 19.248766578523117 9 27.78172514804858 14.047451460108956 18.78160994550853 39.38921344633393 10 15.3350562661192 27.014929050551274 32.385964468340276 25.264050214989247 11 36.15920975789712 21.47541780508578 23.64020651028123 18.725165926735862 12 24.782098843121155 23.867942809311764 29.633292113739447 21.716666233827635 13 29.07227698575423 20.232282020018523 25.820248796537808 24.875192197689433 14 23.474627342738135 19.9210236296501 26.302860396280252 30.301488631331512 15 24.524666845583234 27.69515280385128 23.25817727524272 24.522003075322765 16 24.791188184677345 26.251256067245958 24.654677231504596 24.302878516572097 17 23.209233164437773 26.266067441468664 26.004899724781698 24.519799669311862 18 23.7999188925166 25.46894841950282 27.38696060693436 23.344172081046217 19 25.06917082246522 25.012702126965337 26.485616131401592 23.43251091916786 20 25.443595484069455 24.611075669938057 26.070282731773066 23.87504611421943 21 26.425751323318575 24.37636385550673 25.33187011933673 23.866014701837962 22 25.37222491914234 24.706318717358112 25.93305112228502 23.988405241214533 23 23.942782218297783 24.742209001658786 26.326012967961 24.988995812082432 24 24.31486484416775 25.275901954503894 26.29753660990697 24.111696591421385 25 24.419406071139612 24.873825910054972 26.317061720256113 24.389706298549303 26 23.981659990610236 25.587842584915776 26.636233172508632 23.79426425196536 27 24.378143246814133 25.4135500575374 25.92306237480288 24.285244320845585 28 23.803688989104042 25.232509665982533 26.56290580145413 24.400895543459296 29 24.069878789573853 25.272194053883435 26.12676684739686 24.531160309145854 30 24.051415169099755 25.417238812033098 26.41094044049977 24.12040557836738 31 24.51764912719998 25.22795623879531 25.59989184898282 24.654502785021883 32 24.153160046375007 25.580969466680788 25.62864968425174 24.637220802692468 33 23.990908655024345 25.151300437918874 26.103587525172344 24.754203381884437 34 24.475186391738298 25.16341740828248 26.308271557912626 24.0531246420666 35 24.975510679740957 25.109694174838097 26.059433632443774 23.855361512977176 36 24.130456209143365 25.711511515777918 25.810073575245475 24.347958699833246 37 24.819749837346993 25.544080129829393 25.53329209016937 24.102877942654246 38 24.228136385824918 25.66321233516672 25.877717863628824 24.230933415379532 39 24.731314549269708 25.44878577949913 25.403369464387147 24.416530206844012 40 24.922736586532025 25.61029939114899 25.83637936419253 23.63058465812646 41 24.102896383083856 25.784162390305166 26.12964534057507 23.98329588603591 42 24.915695320490965 26.016717098533924 25.46047935134674 23.607108229628366 43 24.162882066990743 25.512619031764 25.83685156822268 24.487647333022576 44 24.091629486581873 25.872810814410336 25.465605646933476 24.569954052074316 45 24.318172737564094 26.005327295731504 25.308050875674237 24.36844909103017 46 24.20531889461498 25.751696573823185 25.212242367498767 24.830742164063064 47 24.49107339064654 25.664218314032855 25.538759664111765 24.30594863120884 48 24.929329574898667 26.07690407268083 24.814925061047926 24.17884129137258 49 24.39282632089242 25.98307798033178 25.07265041499302 24.551445283782776 50 24.303508345513933 26.344255363070644 24.89783279672106 24.45440349469436 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 36.0 1 34.0 2 32.0 3 114.5 4 197.0 5 228.5 6 260.0 7 283.5 8 307.0 9 437.5 10 568.0 11 906.5 12 1245.0 13 2214.0 14 3183.0 15 4403.5 16 5624.0 17 5962.0 18 6300.0 19 6231.5 20 6163.0 21 6648.5 22 7134.0 23 8118.5 24 9103.0 25 10253.0 26 11403.0 27 14028.0 28 16653.0 29 19604.0 30 22555.0 31 25954.5 32 29354.0 33 34376.5 34 39399.0 35 45220.5 36 51042.0 37 57193.5 38 63345.0 39 67810.0 40 72275.0 41 77861.5 42 83448.0 43 84591.0 44 85734.0 45 92525.5 46 99317.0 47 104184.0 48 109051.0 49 111691.5 50 114332.0 51 111171.5 52 108011.0 53 105864.0 54 103717.0 55 102292.0 56 100867.0 57 96919.0 58 92971.0 59 83688.5 60 74406.0 61 65497.5 62 56589.0 63 48497.5 64 40406.0 65 33994.5 66 27583.0 67 23528.0 68 19473.0 69 17433.0 70 15393.0 71 11995.0 72 8597.0 73 7238.5 74 5880.0 75 4583.0 76 3286.0 77 2921.0 78 2556.0 79 2116.5 80 1677.0 81 1313.5 82 950.0 83 844.0 84 738.0 85 497.5 86 257.0 87 189.5 88 122.0 89 94.0 90 66.0 91 48.0 92 30.0 93 29.0 94 28.0 95 26.0 96 24.0 97 20.5 98 17.0 99 15.0 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008723348007647246 2 3.329522140323376E-4 3 5.993139852582078E-4 4 0.0 5 0.0 6 1.3318088561293506E-4 7 6.659044280646753E-5 8 0.0 9 9.322661992905454E-4 10 9.322661992905454E-4 11 0.0 12 2.663617712258701E-4 13 5.327235424517402E-4 14 1.3318088561293506E-4 15 0.0057267780813562074 16 3.9954265683880515E-4 17 0.0 18 3.9954265683880515E-4 19 0.0 20 7.324948708711428E-4 21 0.0 22 2.663617712258701E-4 23 0.0010654470849034805 24 3.9954265683880515E-4 25 0.0014649897417422855 26 0.005460416310130337 27 0.00566018763854974 28 0.003928836125581584 29 0.0020643037270004936 30 0.003928836125581584 31 0.007524720037130831 32 0.003063160369097506 33 0.00459474055364626 34 0.0027302081550651686 35 0.002796798597871636 36 0.008323805350808441 37 0.0035958839115492465 38 0.008257214908001975 39 0.0035958839115492465 40 0.002397255941032831 41 0.003396112583129844 42 0.001398399298935818 43 0.001132037527709948 44 0.001132037527709948 45 0.001132037527709948 46 9.322661992905454E-4 47 0.0017979419557746232 48 0.0018645323985810908 49 3.329522140323376E-4 50 7.990853136776103E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1501717.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.958788612995676 #Duplication Level Percentage of deduplicated Percentage of total 1 74.99673938832072 41.21729946706646 2 14.533837260295687 15.97524179448542 3 4.7357500839568205 7.808132633644783 4 2.020512547585471 4.44179687970621 5 1.0442063583939187 2.8694158259658695 6 0.6101529689564563 2.0119960825481757 7 0.3963273812781192 1.5247170938444408 8 0.28871310744783996 1.269385811362156 9 0.20503625496395955 1.0141689775108087 >10 1.0338877573215237 10.072031720435746 >50 0.06848407608890168 2.568200836734748 >100 0.0601208732705413 6.599429132759519 >500 0.00525438257185669 1.9897906260143525 >1k 9.775595482524073E-4 0.6383931179213755 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1538 0.10241610103634707 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.997713284194026E-4 2 0.0 0.0 0.0 0.0 1.997713284194026E-4 3 0.0 0.0 0.0 0.0 1.997713284194026E-4 4 0.0 0.0 0.0 0.0 1.997713284194026E-4 5 0.0 0.0 0.0 0.0 3.3295221403233766E-4 6 0.0 0.0 0.0 0.0 3.3295221403233766E-4 7 0.0 0.0 0.0 0.0 3.3295221403233766E-4 8 0.0 0.0 0.0 0.0 3.3295221403233766E-4 9 0.0 0.0 0.0 6.659044280646753E-5 3.3295221403233766E-4 10 0.0 0.0 0.0 6.659044280646753E-5 4.661330996452727E-4 11 0.0 0.0 0.0 1.997713284194026E-4 5.327235424517402E-4 12 0.0 0.0 0.0 1.997713284194026E-4 0.0010654470849034805 13 0.0 0.0 0.0 1.997713284194026E-4 0.0012652184133228831 14 0.0 0.0 0.0 1.997713284194026E-4 0.0012652184133228831 15 0.0 0.0 0.0 1.997713284194026E-4 0.0013983992989358182 16 0.0 0.0 0.0 1.997713284194026E-4 0.0014649897417422857 17 0.0 0.0 0.0 2.663617712258701E-4 0.0014649897417422857 18 0.0 0.0 0.0 2.663617712258701E-4 0.0015315801845487533 19 0.0 0.0 0.0 2.663617712258701E-4 0.0015981706273552208 20 0.0 0.0 0.0 3.3295221403233766E-4 0.0017313515129681557 21 0.0 0.0 0.0 3.3295221403233766E-4 0.0018645323985810908 22 0.0 0.0 0.0 3.995426568388052E-4 0.0019311228413875583 23 0.0 0.0 0.0 5.327235424517402E-4 0.0019311228413875583 24 0.0 0.0 0.0 5.993139852582078E-4 0.001997713284194026 25 0.0 0.0 0.0 5.993139852582078E-4 0.001997713284194026 26 0.0 0.0 0.0 7.324948708711429E-4 0.002130894169806961 27 0.0 0.0 0.0 8.656757564840778E-4 0.002264075055419896 28 0.0 0.0 0.0 9.322661992905454E-4 0.0023306654982263634 29 0.0 0.0 0.0 0.0020643037270004936 0.0023306654982263634 30 0.0 0.0 0.0 0.003995426568388052 0.0023306654982263634 31 0.0 0.0 0.0 0.008856528893260182 0.0024638463838392985 32 0.0 0.0 0.0 0.014516716531809921 0.0025304368266457662 33 0.0 0.0 0.0 0.02077621815561787 0.0025304368266457662 34 0.0 0.0 0.0 0.02696912933661935 0.0027302081550651686 35 0.0 0.0 0.0 0.034493849373750184 0.0027302081550651686 36 0.0 0.0 0.0 0.04867761369152777 0.0027302081550651686 37 0.0 0.0 0.0 0.0693206509615327 0.0027302081550651686 38 0.0 0.0 0.0 0.10228292015073413 0.0027967985978716364 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACG 465 0.0 20.342855 4 ACTAGAC 160 5.2750693E-11 19.248194 3 GTATCAA 3740 0.0 19.11649 1 CTAGCCG 60 0.007412657 18.333445 9 CGCACGA 60 0.007414081 18.332834 10 CCGTCGT 315 0.0 18.158842 9 CGTCGTA 320 0.0 17.874514 10 GTATAGA 185 2.1827873E-11 17.83676 1 ATACGAT 75 0.0012915921 17.598934 6 ATACCGT 350 0.0 17.598934 6 ACCGTCG 340 0.0 17.46953 8 AACGCAG 4265 0.0 16.814926 6 TACCGTC 370 0.0 16.647642 7 ATACTAG 135 1.0865606E-6 16.29531 1 TACGCTA 345 0.0 15.942125 9 GTCGTAG 360 0.0 15.887927 11 TCAATAC 180 5.2750693E-9 15.887399 3 CTTACGC 85 0.0029822544 15.527954 3 ACGTATG 100 4.9419556E-4 15.401118 32 CTATACA 200 1.2787496E-9 15.399068 4 >>END_MODULE