FastQCFastQC Report
Thu 2 Feb 2017
SRR4064111_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4064111_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1351699
Sequences flagged as poor quality0
Sequence length50
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATCAA22100.024.8890131
CGTTCGC450.001398203224.4447325
GTAATAC1352.6011548E-919.554343
AACGCAG28800.018.7904976
GGTATCA10250.018.2454661
TCAACGC30050.017.9356564
CAACGCA30700.017.6275675
ATCAACG30700.017.555913
CGTATAT2150.017.3949110
ATGCACG1903.274181E-1117.367346
TATCAAC32150.016.9015962
GTATAGA1602.12749E-816.5014151
AGCGTAT2400.016.4989748
GGCGTTA3350.016.41749642
TAGCGTA2301.8189894E-1216.2598577
TACCGTC3400.016.1754657
ACCGTCG3300.015.9990048
GATTAAT4000.015.95018938
ATAGCGT2353.6379788E-1215.9139036
CTATACC1259.447414E-615.8390154
Produced by FastQC (version 0.11.5)