##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064109_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 14946 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.941389000401447 32.0 32.0 32.0 21.0 32.0 2 29.718854543021543 32.0 32.0 32.0 21.0 32.0 3 30.68740800214104 32.0 32.0 32.0 32.0 32.0 4 31.054195102368528 32.0 32.0 32.0 32.0 32.0 5 30.80396092600027 32.0 32.0 32.0 32.0 32.0 6 34.293991703465814 36.0 36.0 36.0 32.0 36.0 7 34.44312859627994 36.0 36.0 36.0 32.0 36.0 8 34.240331861367586 36.0 36.0 36.0 32.0 36.0 9 34.54817342432758 36.0 36.0 36.0 32.0 36.0 10 34.063896694767834 36.0 36.0 36.0 32.0 36.0 11 34.624782550515185 36.0 36.0 36.0 32.0 36.0 12 34.39723002810116 36.0 36.0 36.0 32.0 36.0 13 34.489094071992504 36.0 36.0 36.0 32.0 36.0 14 34.39562424729024 36.0 36.0 36.0 32.0 36.0 15 34.359561086578346 36.0 36.0 36.0 32.0 36.0 16 34.35340559346982 36.0 36.0 36.0 32.0 36.0 17 34.300080289040544 36.0 36.0 36.0 32.0 36.0 18 34.3621035728623 36.0 36.0 36.0 32.0 36.0 19 34.3083768232303 36.0 36.0 36.0 32.0 36.0 20 34.367924528301884 36.0 36.0 36.0 32.0 36.0 21 34.305299076676036 36.0 36.0 36.0 32.0 36.0 22 34.323631740934026 36.0 36.0 36.0 32.0 36.0 23 34.229894286096616 36.0 36.0 36.0 32.0 36.0 24 34.145925331192295 36.0 36.0 36.0 32.0 36.0 25 34.112538471831925 36.0 36.0 36.0 32.0 36.0 26 34.033587581961726 36.0 36.0 36.0 32.0 36.0 27 34.061822561220396 36.0 36.0 36.0 32.0 36.0 28 34.0137160444266 36.0 36.0 36.0 32.0 36.0 29 33.977987421383645 36.0 36.0 36.0 32.0 36.0 30 33.840693162050044 36.0 36.0 36.0 32.0 36.0 31 33.881038404924396 36.0 36.0 36.0 32.0 36.0 32 33.85380703867256 36.0 36.0 36.0 32.0 36.0 33 33.799611936304025 36.0 36.0 36.0 32.0 36.0 34 33.76856684062626 36.0 36.0 36.0 32.0 36.0 35 33.720661046433825 36.0 36.0 36.0 32.0 36.0 36 33.67998126589054 36.0 36.0 36.0 27.0 36.0 37 33.70058878629734 36.0 36.0 36.0 32.0 36.0 38 33.559547705071594 36.0 36.0 36.0 27.0 36.0 39 33.634818680583436 36.0 36.0 36.0 27.0 36.0 40 33.546300013381504 36.0 36.0 36.0 21.0 36.0 41 33.58263080422856 36.0 36.0 36.0 27.0 36.0 42 33.431085240198044 36.0 36.0 36.0 21.0 36.0 43 33.451224407868324 36.0 36.0 36.0 21.0 36.0 44 33.28683259735046 36.0 36.0 36.0 21.0 36.0 45 33.322962665596144 36.0 36.0 36.0 21.0 36.0 46 33.277197912484944 36.0 36.0 36.0 21.0 36.0 47 33.23651813194166 36.0 36.0 36.0 21.0 36.0 48 33.130268968285826 36.0 36.0 36.0 14.0 36.0 49 33.17402649538338 36.0 36.0 36.0 21.0 36.0 50 32.30329185066238 36.0 32.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 21 2.0 22 1.0 23 7.0 24 16.0 25 57.0 26 102.0 27 174.0 28 318.0 29 500.0 30 695.0 31 1061.0 32 1525.0 33 2192.0 34 3475.0 35 4821.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.9277350284376 18.447641351622615 13.101371696219472 24.523251923720306 2 17.14171015656363 21.336812525090327 37.35447611401044 24.16700120433561 3 20.19938445068915 24.1870734644721 29.19844774521611 26.41509433962264 4 13.394888264418572 16.7402649538338 36.70547303626389 33.15937374548374 5 17.02127659574468 35.00602167804095 31.613809714973907 16.358892011240467 6 34.2700388063696 36.69209152950622 15.96413756188947 13.073732102234711 7 30.001338150675767 30.18198849190419 19.97858958918774 19.838083768232302 8 27.70640974173692 33.54074668807708 18.35942727151077 20.39341629867523 9 26.756322761942997 13.227619429947811 17.489629332262812 42.52642847584638 10 14.438645791516125 26.716178241670015 31.98849190418841 26.85668406262545 11 38.652482269503544 20.19938445068915 22.2534457379901 18.89468754181721 12 24.140238190820288 23.397564565770107 29.619965208082434 22.84223203532718 13 29.9210491101298 18.707346447209954 25.05018065034123 26.321423792319017 14 23.103171417101564 20.10571390338552 24.996654623310587 31.79446005620233 15 25.27266644362663 27.280026764804283 21.75978588156574 25.687520910003347 16 24.46303111408498 26.77818668450987 24.041485446637672 24.71729675476748 17 22.74856148802355 26.69610598153352 24.836076542218656 25.719255988224276 18 24.106784423926133 25.68580222133012 26.24113475177305 23.966278602970696 19 25.545296400374685 25.47838886658638 24.862839555733977 24.113475177304963 20 25.404790579419245 24.581827913823094 24.76247825505152 25.25090325170614 21 27.030643650475046 24.675498461126725 23.257058744814664 25.036799143583565 22 25.177304964539005 25.39140907266158 24.849458048976313 24.581827913823094 23 23.43101833266426 25.431553592934563 25.47838886658638 25.6590392078148 24 23.544761140104377 27.151077211293988 24.708952228020877 24.59520942058076 25 24.382736701237874 25.600535296085646 25.245901639344265 24.77082636333222 26 23.492806958849112 26.610906657745065 25.205754432920706 24.690531950485113 27 24.877885580461694 25.687520910003347 25.05854800936768 24.37604550016728 28 24.146928944199118 26.24113475177305 25.91997858958919 23.691957714438647 29 24.215456674473067 25.453328872532623 24.84442957510873 25.486784877885583 30 24.215456674473067 25.44663767146203 25.70759451321512 24.630311140849784 31 24.663767146202744 26.1559049849448 24.99832719973235 24.182000669120107 32 24.877885580461694 26.12914018066243 25.105386416861826 23.88758782201405 33 23.974573435931752 25.687520910003347 25.3864168618267 24.95148879223821 34 24.871194379391103 24.75075276012044 25.593844095015054 24.7842087654734 35 24.93643784290111 26.120701190954097 24.722333734778537 24.22052723136625 36 23.037805286048847 26.75811308129809 25.406490465038473 24.797591167614584 37 24.74909674829386 25.77947276863375 25.25090325170614 24.22052723136625 38 24.280744011775727 25.47838886658638 24.829385788839822 25.411481332798076 39 24.797591167614584 25.48009367681499 24.764135162261624 24.9581799933088 40 25.264284758463802 26.528837147062763 24.842767295597483 23.364110798875952 41 24.294125518533388 25.759400508497254 25.886524822695034 24.05994915027432 42 25.33788304563094 26.348186805834338 24.9565101030376 23.357420045497122 43 23.84074941451991 26.262964202074272 25.33957845433255 24.55670792907327 44 23.732102234711625 26.160845711227083 25.150541951023687 24.9565101030376 45 24.280744011775727 26.87006556938311 24.722333734778537 24.126856684062624 46 23.859226548909408 26.749632008564166 24.126856684062624 25.264284758463802 47 24.882911815870468 26.267897765288375 25.07694366385655 23.77224675498461 48 25.551987153753515 26.970426870065566 23.832463535394087 23.645122440786835 49 24.294125518533388 26.903519336277267 24.36772380570052 24.434631339488828 50 24.670458347273335 25.915021746403475 24.616928738708598 24.797591167614584 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 1.0 2 2.0 3 1.5 4 1.0 5 1.5 6 2.0 7 5.5 8 9.0 9 9.0 10 9.0 11 10.5 12 12.0 13 19.0 14 26.0 15 32.0 16 38.0 17 38.0 18 38.0 19 51.5 20 65.0 21 69.0 22 73.0 23 95.5 24 118.0 25 120.0 26 122.0 27 151.5 28 181.0 29 231.5 30 282.0 31 321.5 32 361.0 33 397.0 34 433.0 35 487.5 36 542.0 37 606.0 38 670.0 39 686.0 40 702.0 41 729.5 42 757.0 43 760.0 44 763.0 45 823.0 46 883.0 47 933.5 48 984.0 49 972.5 50 961.0 51 911.5 52 862.0 53 891.0 54 920.0 55 939.5 56 959.0 57 960.0 58 961.0 59 843.5 60 726.0 61 684.5 62 643.0 63 546.0 64 449.0 65 397.5 66 346.0 67 332.5 68 319.0 69 276.0 70 233.0 71 183.5 72 134.0 73 126.0 74 118.0 75 93.0 76 68.0 77 57.0 78 46.0 79 47.0 80 48.0 81 35.5 82 23.0 83 25.5 84 28.0 85 21.0 86 14.0 87 9.5 88 5.0 89 4.0 90 3.0 91 3.0 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 1.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.006690753378830456 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.006690753378830456 16 0.006690753378830456 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.006690753378830456 26 0.006690753378830456 27 0.006690753378830456 28 0.0 29 0.006690753378830456 30 0.006690753378830456 31 0.006690753378830456 32 0.006690753378830456 33 0.006690753378830456 34 0.006690753378830456 35 0.0 36 0.006690753378830456 37 0.0 38 0.0 39 0.006690753378830456 40 0.0 41 0.0 42 0.0 43 0.006690753378830456 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.006690753378830456 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 14946.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 88.03693295865115 #Duplication Level Percentage of deduplicated Percentage of total 1 94.49004407964736 83.18613675899907 2 3.343973248214014 5.887862973370801 3 0.8207934336525308 2.1678040947410677 4 0.44079647362821095 1.552254783888666 5 0.2051983584131327 0.9032517061421117 6 0.15199878400972794 0.8028904054596547 7 0.12159902720778233 0.749364378429011 8 0.06839945280437756 0.4817342432757929 9 0.037999696002431985 0.3010839020473705 >10 0.31919744642042863 3.967616753646461 >50 0.0 0.0 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 25 0.1672688344707614 No Hit GTATCAACGCAGAGTACATGGGTACCTGGTTGATCCTGCCAGTAGCATAT 23 0.1538873277131005 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 23 0.1538873277131005 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGTCCACTTTAAATC 20 0.13381506757660913 No Hit TATCAACGCAGAGTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATG 20 0.13381506757660913 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 20 0.13381506757660913 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 19 0.12712431419777867 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 19 0.12712431419777867 No Hit GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAG 19 0.12712431419777867 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 19 0.12712431419777867 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 18 0.12043356081894822 No Hit GGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCTT 18 0.12043356081894822 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 17 0.11374280744011775 No Hit CTCCCGACCCGGGGAGGTAGTGACGAAAAATAACAATACAGGACTCTTTC 17 0.11374280744011775 No Hit TTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATG 16 0.1070520540612873 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGG 15 0.10036130068245684 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 15 0.10036130068245684 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 0.0 0.0 23 0.0 0.0 0.0 0.0 0.0 24 0.0 0.0 0.0 0.0 0.0 25 0.0 0.0 0.0 0.0 0.0 26 0.0 0.0 0.0 0.0 0.0 27 0.0 0.0 0.0 0.0 0.0 28 0.0 0.0 0.0 0.0 0.0 29 0.0 0.0 0.0 0.006690753378830456 0.0 30 0.0 0.0 0.0 0.006690753378830456 0.0 31 0.0 0.0 0.0 0.013381506757660913 0.0 32 0.0 0.0 0.0 0.02007226013649137 0.0 33 0.0 0.0 0.0 0.02007226013649137 0.0 34 0.0 0.0 0.0 0.02007226013649137 0.0 35 0.0 0.0 0.0 0.02007226013649137 0.0 36 0.0 0.0 0.0 0.026763013515321826 0.0 37 0.0 0.0 0.0 0.04014452027298274 0.0 38 0.0 0.0 0.0 0.06690753378830457 0.0 >>END_MODULE >>Kmer Content pass >>END_MODULE