##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4064108_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2523584 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.323555704902233 32.0 32.0 32.0 32.0 32.0 2 31.406857469376884 32.0 32.0 32.0 32.0 32.0 3 31.478886377469504 32.0 32.0 32.0 32.0 32.0 4 31.56799615150516 32.0 32.0 32.0 32.0 32.0 5 31.507334806370622 32.0 32.0 32.0 32.0 32.0 6 35.10583875947858 36.0 36.0 36.0 36.0 36.0 7 35.1266837164921 36.0 36.0 36.0 36.0 36.0 8 35.06825808057113 36.0 36.0 36.0 36.0 36.0 9 35.17817041160508 36.0 36.0 36.0 36.0 36.0 10 35.02769830526743 36.0 36.0 36.0 36.0 36.0 11 35.17453153927113 36.0 36.0 36.0 36.0 36.0 12 35.075062688620626 36.0 36.0 36.0 36.0 36.0 13 35.12721114098045 36.0 36.0 36.0 36.0 36.0 14 35.06432161560701 36.0 36.0 36.0 36.0 36.0 15 35.03329589979965 36.0 36.0 36.0 36.0 36.0 16 35.048546432375545 36.0 36.0 36.0 36.0 36.0 17 35.01331875618168 36.0 36.0 36.0 36.0 36.0 18 35.013473694555046 36.0 36.0 36.0 36.0 36.0 19 35.00623478354594 36.0 36.0 36.0 36.0 36.0 20 35.00094112183307 36.0 36.0 36.0 36.0 36.0 21 34.99442855874819 36.0 36.0 36.0 36.0 36.0 22 34.97446052915219 36.0 36.0 36.0 36.0 36.0 23 34.927488445005196 36.0 36.0 36.0 32.0 36.0 24 34.886440078871956 36.0 36.0 36.0 32.0 36.0 25 34.85977879079912 36.0 36.0 36.0 32.0 36.0 26 34.802840325505315 36.0 36.0 36.0 32.0 36.0 27 34.794618685171564 36.0 36.0 36.0 32.0 36.0 28 34.768900500240925 36.0 36.0 36.0 32.0 36.0 29 34.73764733014633 36.0 36.0 36.0 32.0 36.0 30 34.71215541071746 36.0 36.0 36.0 32.0 36.0 31 34.71466335180442 36.0 36.0 36.0 32.0 36.0 32 34.67391297456316 36.0 36.0 36.0 32.0 36.0 33 34.64973941822424 36.0 36.0 36.0 32.0 36.0 34 34.646698901245216 36.0 36.0 36.0 32.0 36.0 35 34.605679462225154 36.0 36.0 36.0 32.0 36.0 36 34.5798118865867 36.0 36.0 36.0 32.0 36.0 37 34.57186445943547 36.0 36.0 36.0 32.0 36.0 38 34.513367496386095 36.0 36.0 36.0 32.0 36.0 39 34.5100083849002 36.0 36.0 36.0 32.0 36.0 40 34.49425103345084 36.0 36.0 36.0 32.0 36.0 41 34.480888292206636 36.0 36.0 36.0 32.0 36.0 42 34.41346592782329 36.0 36.0 36.0 32.0 36.0 43 34.41415502713601 36.0 36.0 36.0 32.0 36.0 44 34.33077202898735 36.0 36.0 36.0 32.0 36.0 45 34.308228297532395 36.0 36.0 36.0 32.0 36.0 46 34.267834159671324 36.0 36.0 36.0 32.0 36.0 47 34.25111745834496 36.0 36.0 36.0 32.0 36.0 48 34.193661078846596 36.0 36.0 36.0 32.0 36.0 49 34.17267663767087 36.0 36.0 36.0 32.0 36.0 50 33.57232451941366 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 7.0 18 1.0 19 6.0 20 18.0 21 81.0 22 246.0 23 778.0 24 1909.0 25 4524.0 26 9273.0 27 17091.0 28 28645.0 29 43969.0 30 64017.0 31 91529.0 32 131858.0 33 214810.0 34 444852.0 35 1469969.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.32547636767714 17.483551732091183 11.548225663657194 26.64274623657448 2 15.97682493162475 19.91841729230052 37.41740880196103 26.687348974113696 3 18.56303062124169 23.706606698830033 28.692430381502433 29.037932298425844 4 12.04112880728361 15.695653483299942 35.80514855063275 36.458069158783694 5 14.14619049732444 36.980936636149224 33.387634412010854 15.485238454515482 6 34.982459435587316 35.71911162678085 16.26218160794649 13.036247329685342 7 30.472110487350722 30.248499851203626 20.26444147071842 19.01494819072723 8 28.19146427916181 33.7431738920416 18.68842831799073 19.376933510805866 9 27.49119201002076 13.401657419812718 17.871333405453644 41.23581716471288 10 15.698643425443876 26.967278790851978 31.457677679407126 25.87640010429702 11 38.32256029519921 20.243035302173418 22.297216973954505 19.13718742867287 12 25.025757059415593 23.077611963955967 29.078769050317405 22.817861926311032 13 30.313396793595114 19.108930429620845 25.005844885071728 25.571827891712314 14 23.53042806336249 19.597119166262146 24.73665335882627 32.135799411549094 15 25.272409028243676 27.864004916974537 21.722383527976785 25.141202526805 16 25.786028692662622 25.391587796979838 24.183340122651543 24.639043387705996 17 24.094977619132155 25.82137150972585 25.126803783824908 24.956847087317087 18 24.92930666641306 24.698166411473245 26.518281993488607 23.854244928625093 19 26.16063199055945 24.163351933878115 24.83743345768039 24.838582617882043 20 26.181182863021146 24.216982911523825 24.6231532129854 24.978681012469625 21 27.239156691435674 23.86082650706297 23.90663437396972 24.99338242753164 22 26.320069108171722 24.301428922403886 24.72776769509982 24.65073427432457 23 24.76233989892065 24.087856767537314 25.299081219324115 25.850722114217916 24 25.339984759679645 24.593224912811973 25.049879753634634 25.016910573873748 25 25.360257384161873 24.197210033670917 25.263092406192406 25.17944017597481 26 24.501642401500494 25.377312469213642 25.718117220190383 24.402927909095485 27 25.34443984315093 24.526748155794955 25.08348705836664 25.045324942687476 28 24.57936114489378 24.851009497587263 25.327137135459203 25.24249222205975 29 24.599339891096694 24.358842776546915 25.195728352782993 25.846088979573402 30 24.33191571652525 24.931761009778544 25.641573316890458 25.09474995680575 31 25.5369739240707 24.45430768011413 24.522945232622654 25.485773163192516 32 25.154616787735435 24.820358415326034 24.41148136890989 25.613543428028645 33 24.586195295134917 24.421065729651158 25.367578729790253 25.625160245423668 34 25.33221689540963 24.661363454437524 25.41487979799501 24.591539852157833 35 25.653626175401694 24.47446977391313 25.56684191275685 24.305062137928328 36 24.309302716343716 25.201910761387847 25.106919574921378 25.381866947347064 37 25.450260612019182 24.866702093891657 24.73969509602403 24.943342198065135 38 25.006419940175668 24.85337173672856 24.889236217339544 25.25097210575623 39 25.759101430288446 24.098733612392742 24.658358288979848 25.483806668338964 40 26.308101808463803 24.588165037528885 24.909699654015437 24.19403349999188 41 24.80156481449926 24.744857725043133 25.89508831802255 24.558489142435054 42 26.076717229496655 25.328676887546674 25.014909687909025 23.579696195047646 43 24.959164539365702 24.370032280025455 25.48865840156415 25.18214477904469 44 24.40348984150521 25.11510556742815 24.902349980364985 25.579054610701657 45 24.584077655745006 25.282380204378914 25.048305005492267 25.085237134383814 46 24.64995851095953 24.562780011396608 24.975728713189866 25.811532764453997 47 25.295112752904963 24.521077048115593 25.267809696508102 24.91600050247134 48 25.708761686548282 25.0752024651271 24.200393022289095 25.015642826035528 49 25.03673370402541 25.20455165067872 24.637180373185902 25.12153427210996 50 25.027738635481043 25.618452691360922 24.25743672817247 25.096371944985567 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 26.0 1 28.0 2 30.0 3 133.5 4 237.0 5 266.0 6 295.0 7 291.5 8 288.0 9 368.0 10 448.0 11 710.5 12 973.0 13 1967.0 14 2961.0 15 3966.0 16 4971.0 17 5524.0 18 6077.0 19 6057.0 20 6037.0 21 6788.5 22 7540.0 23 8621.0 24 9702.0 25 11915.5 26 14129.0 27 18721.0 28 23313.0 29 27744.5 30 32176.0 31 36800.5 32 41425.0 33 49323.5 34 57222.0 35 67822.5 36 78423.0 37 88721.0 38 99019.0 39 102972.5 40 106926.0 41 114164.0 42 121402.0 43 124235.5 44 127069.0 45 140412.0 46 153755.0 47 165101.5 48 176448.0 49 184428.5 50 192409.0 51 187397.0 52 182385.0 53 180179.0 54 177973.0 55 181041.0 56 184109.0 57 180106.5 58 176104.0 59 161672.0 60 147240.0 61 130617.5 62 113995.0 63 99231.5 64 84468.0 65 72054.0 66 59640.0 67 51825.0 68 44010.0 69 39880.0 70 35750.0 71 27331.5 72 18913.0 73 16442.0 74 13971.0 75 10723.0 76 7475.0 77 6526.5 78 5578.0 79 4635.5 80 3693.0 81 2983.5 82 2274.0 83 1825.0 84 1376.0 85 996.5 86 617.0 87 446.5 88 276.0 89 213.0 90 150.0 91 122.0 92 94.0 93 81.0 94 68.0 95 65.0 96 62.0 97 48.5 98 35.0 99 31.0 100 27.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008638507773071949 2 3.962618244528417E-4 3 3.5663564200755747E-4 4 0.0 5 0.0 6 1.9813091222642084E-4 7 3.962618244528417E-5 8 3.962618244528417E-5 9 9.114021962415359E-4 10 8.717760137962516E-4 11 0.0 12 1.5850472978113668E-4 13 3.962618244528417E-4 14 3.5663564200755747E-4 15 0.0032097207780680177 16 4.7551418934341E-4 17 0.0 18 3.1700945956227337E-4 19 7.925236489056834E-5 20 4.7551418934341E-4 21 0.0 22 1.5850472978113668E-4 23 8.717760137962516E-4 24 5.943927366792625E-4 25 0.0016246734802566507 26 0.005745796454566204 27 0.005508039359894499 28 0.0040022444269737015 29 0.0024171971291623343 30 0.003962618244528417 31 0.007291217569932287 32 0.0034474778727397225 33 0.004398506251426543 34 0.0032493469605133015 35 0.003368225507849154 36 0.00760822702949456 37 0.0040022444269737015 38 0.007766731759275697 39 0.004240001521645406 40 0.0024171971291623343 41 0.003566356420075575 42 0.0022586923993811975 43 0.001664299662701935 44 0.001228411655803809 45 0.0014265425680302299 46 0.0010302807435773884 47 0.0022586923993811975 48 0.0024964494940529023 49 6.340189191245467E-4 50 0.0011095331084679566 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2523584.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.473416739878346 #Duplication Level Percentage of deduplicated Percentage of total 1 70.29783859281517 31.96682910243787 2 15.523377799532309 14.118020557774166 3 5.981838664064932 8.160439273252255 4 2.7941224238559594 5.0823317360896425 5 1.558296934090582 3.543054294418789 6 0.947192857884491 2.58432573357707 7 0.5974461053007196 1.9017541008169807 8 0.4178599679116506 1.5201216367806942 9 0.3075295444271413 1.2585977220204296 >10 1.3863523031197966 10.984358124460709 >50 0.0901485074371663 2.855213579011769 >100 0.07927056309327478 7.51156092848819 >500 0.01239591005554952 3.9512676201570405 >1k 0.006329826411343895 4.562125590714331 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2901 0.11495555527376937 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2800 0.11095331084679566 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2740 0.10857573990007861 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2688 0.10651517841292384 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2674 0.10596041185868986 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 2652 0.10508863584489361 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.5850472978113666E-4 2 0.0 0.0 0.0 0.0 1.5850472978113666E-4 3 0.0 0.0 0.0 0.0 1.5850472978113666E-4 4 0.0 0.0 0.0 0.0 1.5850472978113666E-4 5 0.0 0.0 0.0 0.0 1.5850472978113666E-4 6 0.0 0.0 0.0 0.0 1.9813091222642084E-4 7 0.0 0.0 0.0 0.0 1.9813091222642084E-4 8 0.0 0.0 0.0 0.0 1.9813091222642084E-4 9 0.0 0.0 0.0 0.0 1.9813091222642084E-4 10 0.0 0.0 0.0 0.0 1.9813091222642084E-4 11 0.0 0.0 0.0 3.9626182445284164E-5 2.37757094671705E-4 12 0.0 0.0 0.0 3.9626182445284164E-5 7.13271284015115E-4 13 0.0 0.0 0.0 3.9626182445284164E-5 8.717760137962517E-4 14 0.0 0.0 0.0 7.925236489056833E-5 8.717760137962517E-4 15 0.0 0.0 0.0 7.925236489056833E-5 0.0011491592909132408 16 0.0 0.0 0.0 7.925236489056833E-5 0.001188785473358525 17 0.0 0.0 0.0 7.925236489056833E-5 0.001188785473358525 18 0.0 0.0 0.0 7.925236489056833E-5 0.0012680378382490933 19 0.0 0.0 0.0 7.925236489056833E-5 0.0012680378382490933 20 0.0 0.0 0.0 1.9813091222642084E-4 0.0015057949329207983 21 0.0 0.0 0.0 3.566356420075575E-4 0.001664299662701935 22 0.0 0.0 0.0 4.7551418934341E-4 0.0017435520275925034 23 0.0 0.0 0.0 9.906545611321042E-4 0.0017435520275925034 24 0.0 0.0 0.0 0.001664299662701935 0.0017831782100377876 25 3.9626182445284164E-5 0.0 0.0 0.0022190662169359133 0.0017831782100377876 26 3.9626182445284164E-5 0.0 0.0 0.0024964494940529027 0.0018624305749283558 27 3.9626182445284164E-5 0.0 0.0 0.0028927113185057444 0.0020209353047094926 28 3.9626182445284164E-5 0.0 0.0 0.004913646623215237 0.0020209353047094926 29 3.9626182445284164E-5 0.0 0.0 0.009193274327305927 0.002060561487154777 30 3.9626182445284164E-5 0.0 0.0 0.016920379904136338 0.002100187669600061 31 3.9626182445284164E-5 0.0 0.0 0.034197395450280235 0.002100187669600061 32 3.9626182445284164E-5 0.0 0.0 0.055754038700514826 0.002139813852045345 33 3.9626182445284164E-5 0.0 0.0 0.07592376556516446 0.002179440034490629 34 3.9626182445284164E-5 0.0 0.0 0.09882769901853872 0.0024964494940529027 35 3.9626182445284164E-5 0.0 0.0 0.12418845578352058 0.0024964494940529027 36 3.9626182445284164E-5 0.0 0.0 0.164409030965484 0.0024964494940529027 37 3.9626182445284164E-5 0.0 0.0 0.22440307118764424 0.0024964494940529027 38 3.9626182445284164E-5 0.0 0.0 0.3034176789835409 0.002654954223834039 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4090 0.0 23.774687 1 TCTATAC 210 0.0 20.95039 3 TACGATA 55 0.004487407 19.9981 2 TAGGACG 1290 0.0 19.781067 4 GATTTCG 605 0.0 19.272806 41 GATATAC 1145 0.0 19.21367 1 GCGAGAA 960 0.0 18.562944 20 AGGACGT 1415 0.0 18.500008 5 GTAGGAC 1645 0.0 18.454172 3 ATTTCGT 610 0.0 18.393154 42 TTAGGAC 945 0.0 18.389788 3 TGGCGAG 1690 0.0 18.35365 18 GTCCTAC 1635 0.0 18.299404 1 TATGGCG 1615 0.0 18.115927 16 GACGTGA 790 0.0 18.099546 7 TGTAGGA 1710 0.0 18.009985 2 TCCTACA 1780 0.0 17.919645 2 GTCCTAA 880 0.0 17.749722 1 ATACGAA 860 0.0 17.650885 40 GGTATCA 2160 0.0 17.620092 1 >>END_MODULE